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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0171700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:3845564:3846658:1 gene:Os03g0171700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INCREASED LEAF INCLINATION 3 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os03t0171700-01)
Sequence

ATGTCGAGCCGCCGTGGTGGTGGTGGTGGAGGAGGGAGGATCACCGACGAGGAGATCAAC
GAGCTCATCTCCAAGCTTCAGGCCCTCCTCCCGGAGTCCTCCCGCAGCCGCGGCGCAAGC
CGGTCGTCGGCGTCGAAGCTGCTCAAGGAGACGTGCAGCTACATCAAGAGCCTGCACCGG
GAGGTGGACGACCTGTCCGACCGGCTGTCGGAGCTCATGTCGACGATGGACAACAACAGC
CCGCAGGCCGAGATCATCCGGAGCCTCCTCCGGTGA

Peptide Sequence

PEP ID

Os03t0171700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:3845564:3846658:1 gene:Os03g0171700 transcript:Os03t0171700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INCREASED LEAF INCLINATION 3 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os03t0171700-01)
Sequence

MSSRRGGGGGGGRITDEEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKSLHR
EVDDLSDRLSELMSTMDNNSPQAEIIRSLLR

Transcript Sequence

Transcript ID

Os03t0171700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3845564:3846658:1 gene:Os03g0171700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INCREASED LEAF INCLINATION 3 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os03t0171700-01)
Sequence

ACTCACACTGTCACTTCCACATTTTCTTTGCTCTCTCACTGTCCGTACGTCGTCGGCTTG
ATCACCAACCTTGCTGACGGTGGTCGGTCGCCGGAGTTCGAGGAGAAGAAGGCAGTAGAG
GTGTGGTGGTGATATTGCAGGCGGCGACCATGTCGAGCCGCCGTGGTGGTGGTGGTGGAG
GAGGGAGGATCACCGACGAGGAGATCAACGAGCTCATCTCCAAGCTTCAGGCCCTCCTCC
CGGAGTCCTCCCGCAGCCGCGGCGCAAGCCGGTCGTCGGCGTCGAAGCTGCTCAAGGAGA
CGTGCAGCTACATCAAGAGCCTGCACCGGGAGGTGGACGACCTGTCCGACCGGCTGTCGG
AGCTCATGTCGACGATGGACAACAACAGCCCGCAGGCCGAGATCATCCGGAGCCTCCTCC
GGTGATCGATCCTAGCTCTATCAGTAGCTGCAGCGACGACGACGATTGATGGAGGACGAG
CTTGCTAGCTAGCGATTGAGGAGGGAGACGACAAGATTTTTTTGCTCTTCTTTGTTTCTT
TCTTCGATCTCTCCTGAAAAGGGAAAAGTGTTTGTTTCTCAGGTAATCACCGAAGGCCCC
TGCATTGTTTAGGAGAAGAAAAAGGGTTGTCTTGTTTGGTATGTACTGTACCAGGGCTAA
TAGAGATCGATATATGTGGATTTCTATTAGCTGCTAGTAGAGTTATTAGTAGCTAGATTA
GCTACTTAATTTAGCTTGTAGACGTACTACTACTGTACTTAAGCTGCTTTGATAAGCTTC
AGAGATGCATCTAGAGGTGTTTGTTT