Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0171600-03
CDS Infomation	cds chromosome:IRGSP-1.0:3:3834959:3836735:1 gene:Os03g0171600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-Box Protein 12, F-box protein 130, F-box protein containing kelch motif 12 description:F-box protein containing a Kelch repeat motif, Reguration of leaf senescence, seed size and grain number (Os03t0171600-01);Kelch-type beta propeller domain containing protein. (Os03t0171600-02);Similar to kelch motif family protein. (Os03t0171600-03)
Sequence	GCGTACCTCTCCCACGAGGTGCTCAACGGCAAGCGCCCGGCGCCGGAGGATGCGGAAGCC GAGGACATGGACGAGGTTGACTTCGGCGGCGGGAAGCGCAGCAAGCCGCCATCGCCGCAG CCGCACACGCCGGACATATCTGAGGGCCATGGCTCCAGTCGCCATGTTGCCGCCTCTGGC GGCGGAGAGGAGCATGGCAACGGGAGCAGCCTCATTGGTGCGATTGGCCGTGACCTTACC ATCAATTGCCTCCTCCGGCTGTCACGGTCAGACTATGGCTCGGTGGCCTCCCTGAACAAG GACTTCCGGTCGCTCGTGCGCAACGGGGAGATCTACCGCCTGCGTCGCCAGAGTGGGGTG GCAGAGCACTGGGTCTACTTCTCCTGTAACGTCCTCGAGTGGGACGCTTACGACCCATAT CGCGAGCGCTGGATCCAAGTGCCCAAGATGCCACCAGATGAATGCTTCATGTGTTCTGAC AAGGAATCACTTGCTGTGGGCACTGAACTTCTTGTGTTTGCGATGGCACACATTGTGTTC AGATATAGCATTCTAACCAATTCATGGACACGGGCTGATCCGATGATCTCACCACGGTGC TTGTTTGGGTCAACAAGTGTTGGGGCAAAGGCATATGTTGCTGGGGGCACTGATTCTTCT GGCAGGATATTGAGCTCTGCAGAAATGTACGACTCGGAGACACATTCTTGGACACCCCTT CCCAGCATGAATCGGGCAAGGAAGATGTGCTCCGGGGTGTTCATGGATGGCAAGTTCTAT GTGGTTGGTGGTGTTGCCAGCAACAACAAGGTGTTGACATGCGGTGAGGAATATGACCTG AAGAGGCGATCTTGGAGGGTGATCGAAAACATGTCTGAGGGTCTCAACGGAGTGACTGGT GCTCCTCCACTTATTGCTGTTGTTAACAATGAGCTTTATGCTGCTGATTATAGTGAAAAG GATGTGAAGAAGTATGACAAGCAAAACAATAAATGGATCACTCTTGGTAAGTTGCCTGAA CGGTCTGTGTCAATGAATGGGTGGGGCCTTGCTTTCCGAGCATGTGGTGATCGGTTGATT GTCATCGGCGGCCCAAGGACTTCTATTGGTGGTACGATTGAGCTTAATTCATGGACCCCG GATGAGCGGCCGCCTGTGTGGAATTTGATTGCCAGGCGGCCATCTGGGAACTTCGTGTAT AATTGTGCTGTGATGGGCTGTTGA

Peptide Sequence

PEP ID	Os03t0171600-03
PEP Infomation	pep chromosome:IRGSP-1.0:3:3834959:3836735:1 gene:Os03g0171600 transcript:Os03t0171600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-Box Protein 12, F-box protein 130, F-box protein containing kelch motif 12 description:F-box protein containing a Kelch repeat motif, Reguration of leaf senescence, seed size and grain number (Os03t0171600-01);Kelch-type beta propeller domain containing protein. (Os03t0171600-02);Similar to kelch motif family protein. (Os03t0171600-03)
Sequence	AYLSHEVLNGKRPAPEDAEAEDMDEVDFGGGKRSKPPSPQPHTPDISEGHGSSRHVAASG GGEEHGNGSSLIGAIGRDLTINCLLRLSRSDYGSVASLNKDFRSLVRNGEIYRLRRQSGV AEHWVYFSCNVLEWDAYDPYRERWIQVPKMPPDECFMCSDKESLAVGTELLVFAMAHIVF RYSILTNSWTRADPMISPRCLFGSTSVGAKAYVAGGTDSSGRILSSAEMYDSETHSWTPL PSMNRARKMCSGVFMDGKFYVVGGVASNNKVLTCGEEYDLKRRSWRVIENMSEGLNGVTG APPLIAVVNNELYAADYSEKDVKKYDKQNNKWITLGKLPERSVSMNGWGLAFRACGDRLI VIGGPRTSIGGTIELNSWTPDERPPVWNLIARRPSGNFVYNCAVMGC

Transcript Sequence

Transcript ID	Os03t0171600-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3834959:3836735:1 gene:Os03g0171600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-Box Protein 12, F-box protein 130, F-box protein containing kelch motif 12 description:F-box protein containing a Kelch repeat motif, Reguration of leaf senescence, seed size and grain number (Os03t0171600-01);Kelch-type beta propeller domain containing protein. (Os03t0171600-02);Similar to kelch motif family protein. (Os03t0171600-03)
Sequence	GGGCGTACCTCTCCCACGAGGTGCTCAACGGCAAGCGCCCGGCGCCGGAGGATGCGGAAG CCGAGGACATGGACGAGGTTGACTTCGGCGGCGGGAAGCGCAGCAAGCCGCCATCGCCGC AGCCGCACACGCCGGACATATCTGAGGGCCATGGCTCCAGTCGCCATGTTGCCGCCTCTG GCGGCGGAGAGGAGCATGGCAACGGGAGCAGCCTCATTGGTGCGATTGGCCGTGACCTTA CCATCAATTGCCTCCTCCGGCTGTCACGGTCAGACTATGGCTCGGTGGCCTCCCTGAACA AGGACTTCCGGTCGCTCGTGCGCAACGGGGAGATCTACCGCCTGCGTCGCCAGAGTGGGG TGGCAGAGCACTGGGTCTACTTCTCCTGTAACGTCCTCGAGTGGGACGCTTACGACCCAT ATCGCGAGCGCTGGATCCAAGTGCCCAAGATGCCACCAGATGAATGCTTCATGTGTTCTG ACAAGGAATCACTTGCTGTGGGCACTGAACTTCTTGTGTTTGCGATGGCACACATTGTGT TCAGATATAGCATTCTAACCAATTCATGGACACGGGCTGATCCGATGATCTCACCACGGT GCTTGTTTGGGTCAACAAGTGTTGGGGCAAAGGCATATGTTGCTGGGGGCACTGATTCTT CTGGCAGGATATTGAGCTCTGCAGAAATGTACGACTCGGAGACACATTCTTGGACACCCC TTCCCAGCATGAATCGGGCAAGGAAGATGTGCTCCGGGGTGTTCATGGATGGCAAGTTCT ATGTGGTTGGTGGTGTTGCCAGCAACAACAAGGTGTTGACATGCGGTGAGGAATATGACC TGAAGAGGCGATCTTGGAGGGTGATCGAAAACATGTCTGAGGGTCTCAACGGAGTGACTG GTGCTCCTCCACTTATTGCTGTTGTTAACAATGAGCTTTATGCTGCTGATTATAGTGAAA AGGATGTGAAGAAGTATGACAAGCAAAACAATAAATGGATCACTCTTGGTAAGTTGCCTG AACGGTCTGTGTCAATGAATGGGTGGGGCCTTGCTTTCCGAGCATGTGGTGATCGGTTGA TTGTCATCGGCGGCCCAAGGACTTCTATTGGTGGTACGATTGAGCTTAATTCATGGACCC CGGATGAGCGGCCGCCTGTGTGGAATTTGATTGCCAGGCGGCCATCTGGGAACTTCGTGT ATAATTGTGCTGTGATGGGCTGTTGAATCCACTGAATAAAGATTCAATATGGTGGATTAT TTATGAAGGATGGTATGCACAAAGGCAGCCTGTTCAATTGCTTCAGTCCTGATGCTCCGT AGCGATTTCTGCCTTCTGTCCAGTTTCAGATTCAACTGGGCATCTGCTGAGTGGCAGCAG TCATGTAACCCCCTGAGTTCTTCTAATACTTCTGTTTTCCTCGCTAATCCATTTCAACAT TTGCATTTGGATCAACTGCTCGTGATTTGAAAGATACGAGACTATGCAAAACAGTGTTAT ATTAATAATCTAGGAACAGCTTTCAGAAGGCTTTTCACTATTGATGAACAACCTGTTAAG CAATACTCGATTCATATGTGGCTGCAACAAAGATATTCATCAATTATGAACACCATGCCT TATGTTTGCTGGTATAATTTTCTTTTATCAACTTTACTTGCTTCATGATGTGCTTGTCTT TCATGAAGTTTTTTACTAGCAACAACGATATGTTTCATCCTAGTTGTGACTTTTGTTTGT ATAAACATGTCTGGGCTGAGAGCTGACCTTGCTTGGT