Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0170300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3763827:3767153:1 gene:Os03g0170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-dehydroquinate synthase family protein. (Os03t0170300-01)
Sequence	ATGGCAGTCTCCTCTTTGGCCTTCGCTAGAGTCCTCGTCCCGCCATCTCCAAGAACAGCA TTAGCTTCGGCTTGCTCCCATTCTATCAAGATGTGCGCTTCTTCAGCCTCACCGTCGGAG TCAAAGAAGACCGTCTGGGTGTGGACAACAAATCGGCAGGTGATGACGGCAGCCGTGGAG AGGGGCTGGAGCACTTTCCTCTTTGGATCCAAAGATCTTGGCAAGGATTGGTCATCTACT GCTCGCATCAATCCTCTTTTTATCGATGGCCTGGAGATATTCGATGAGAAAAAACAAAAG ATTGCTGTAATTTCTGAAGTCTCTTCCCCAGGAGAGCTGGAACTCATACAACCAGACAAT GTGGAAGTGGAAAACATCGTGATAGACTTCCGAGGTGGATGGCAGGTTATACCAGCAGAA AATATAGTTGCTGCATTCCAGGGATGTAGAGGAACTGTATTGGCTGTTTCAACAAACTCA ACTGAGGCTCAGGTTTTTCTTGAGGCCTTGGAGCAAGGGCTTGATGGAGTTATACTTAAA GTAGAGGACATGGATGATATTATCAAACTCAAGGATTATTTTGACAGAAGGAACGAGGCA AAGAGCCAGTTAATGTTGACAAAGGCTACTGTGTCAAAGGTTGAAGTTGTTGGTATGGGT GATCGTGTTTGTGTGGATCTTTGCAGTATGATGCGACCTGGTGAAGGCCTTCTGGTTGGC TCCTATGCAAGAGGAATGTTTCTTGTTCACTCTGAATGCCTGGAGACAAATTATATTGCA AGCAGGCCTTTCAGGGTCAATGCGGGCCCTGTTCATGCATATGTTGCAGTCCCTGGTGGC CGAACTAGTTACCTCTCAGAGCTGCAATCAGGTCGGGAAGTAATAGTTGTTGATCAAAAT GGTTTGTGGCGTACTGCGATTGTTGGTCGTGTTAAGATTGAATCAAGGCCTCTAATCCTT GTAGAAGCAAAGGAGAACGGTGGAGATGATACTTACAGCATTTTCCTGCAAAATGCCGAG ACAGTTGCACTTATCACTCCTGAAAAAGGATCTAGTGGAAGAACTGCTATACCTGTGACT TCACTGAAAGTTGGTGATGAGGTTTTGGTGAGGAAACAGGGCGGTGCCCGTCACACTGGA ATAGAGATTCAGGAGTTTATTGTTGAGAAATGA

Peptide Sequence

PEP ID	Os03t0170300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3763827:3767153:1 gene:Os03g0170300 transcript:Os03t0170300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-dehydroquinate synthase family protein. (Os03t0170300-01)
Sequence	MAVSSLAFARVLVPPSPRTALASACSHSIKMCASSASPSESKKTVWVWTTNRQVMTAAVE RGWSTFLFGSKDLGKDWSSTARINPLFIDGLEIFDEKKQKIAVISEVSSPGELELIQPDN VEVENIVIDFRGGWQVIPAENIVAAFQGCRGTVLAVSTNSTEAQVFLEALEQGLDGVILK VEDMDDIIKLKDYFDRRNEAKSQLMLTKATVSKVEVVGMGDRVCVDLCSMMRPGEGLLVG SYARGMFLVHSECLETNYIASRPFRVNAGPVHAYVAVPGGRTSYLSELQSGREVIVVDQN GLWRTAIVGRVKIESRPLILVEAKENGGDDTYSIFLQNAETVALITPEKGSSGRTAIPVT SLKVGDEVLVRKQGGARHTGIEIQEFIVEK

Transcript Sequence

Transcript ID	Os03t0170300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3763827:3767153:1 gene:Os03g0170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-dehydroquinate synthase family protein. (Os03t0170300-01)
Sequence	AAAGGCATCCGTATCCAATGGCAGTCTCCTCTTTGGCCTTCGCTAGAGTCCTCGTCCCGC CATCTCCAAGAACAGCATTAGCTTCGGCTTGCTCCCATTCTATCAAGATGTGCGCTTCTT CAGCCTCACCGTCGGAGTCAAAGAAGACCGTCTGGGTGTGGACAACAAATCGGCAGGTGA TGACGGCAGCCGTGGAGAGGGGCTGGAGCACTTTCCTCTTTGGATCCAAAGATCTTGGCA AGGATTGGTCATCTACTGCTCGCATCAATCCTCTTTTTATCGATGGCCTGGAGATATTCG ATGAGAAAAAACAAAAGATTGCTGTAATTTCTGAAGTCTCTTCCCCAGGAGAGCTGGAAC TCATACAACCAGACAATGTGGAAGTGGAAAACATCGTGATAGACTTCCGAGGTGGATGGC AGGTTATACCAGCAGAAAATATAGTTGCTGCATTCCAGGGATGTAGAGGAACTGTATTGG CTGTTTCAACAAACTCAACTGAGGCTCAGGTTTTTCTTGAGGCCTTGGAGCAAGGGCTTG ATGGAGTTATACTTAAAGTAGAGGACATGGATGATATTATCAAACTCAAGGATTATTTTG ACAGAAGGAACGAGGCAAAGAGCCAGTTAATGTTGACAAAGGCTACTGTGTCAAAGGTTG AAGTTGTTGGTATGGGTGATCGTGTTTGTGTGGATCTTTGCAGTATGATGCGACCTGGTG AAGGCCTTCTGGTTGGCTCCTATGCAAGAGGAATGTTTCTTGTTCACTCTGAATGCCTGG AGACAAATTATATTGCAAGCAGGCCTTTCAGGGTCAATGCGGGCCCTGTTCATGCATATG TTGCAGTCCCTGGTGGCCGAACTAGTTACCTCTCAGAGCTGCAATCAGGTCGGGAAGTAA TAGTTGTTGATCAAAATGGTTTGTGGCGTACTGCGATTGTTGGTCGTGTTAAGATTGAAT CAAGGCCTCTAATCCTTGTAGAAGCAAAGGAGAACGGTGGAGATGATACTTACAGCATTT TCCTGCAAAATGCCGAGACAGTTGCACTTATCACTCCTGAAAAAGGATCTAGTGGAAGAA CTGCTATACCTGTGACTTCACTGAAAGTTGGTGATGAGGTTTTGGTGAGGAAACAGGGCG GTGCCCGTCACACTGGAATAGAGATTCAGGAGTTTATTGTTGAGAAATGAGACTGCGTCA GTTATTCAGTTACCTGCTAGCAGGCCAGTCTTTGTTCTTCCCAAACAATTCTTTTGCTAA TTCATGGGAGTGAAAATTCACACCAACTTATGATAGGGGACTATCTGAATCATCATTGAA TTCGAGCCATGTACATCTGTATATACTATAGTACTAGTAACTTTTAAGTCAAGGAGGAAA TTTCCATTTGGATG