Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0169800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:3744487:3746086:-1 gene:Os03g0169800 gene_biotype:protein_coding transcript_biotype:protein_coding description:HNH endonuclease domain containing protein. (Os03t0169800-01)
Sequence

ATGGTGGGGAGGAAGCCGCTGCGCCGGCGGCGGCACGACGCGCCGCCCTCGCCGCCGTTG
TTCGGGGCCACGCCTCGGCCGACCTCCCCTCGGTCCTCCTCCGCCTCCGTGGCCGCGGTC
GCGGAGGAGCTGGACGGCCTGCTCCTCACGGCGCCGCGGCCGTCGGCGTCGTCGTCGGAG
CCGCGGAGCTTCCCCTACGTGGTGAAGCAGCGGTGCTGGGAGAAGGCGGAGCGGGTGGCC
GGGCGCGACCCGGAGAGGTGGCGCCGCGACGCGCTCGGCAACGTCGTCTTCCGCAAGCTC
GTCGGCTGCCCCGGATGCCTCTGCCACGACTACGACCACATCGTCCCCTACTCCAAGGGT
GGGAAGAGCACATTGGAGAACTGCCAGGTTTTGCAGGCTACTGTAAACCGGTCTAAAGGG
AACAAAACAGAGTTATCCAAATCTGAGCTCATACAGAAGAGTGCCTATTGTAGGGTCTCA
GGACGTGATATGGATCTTCTTGAACTCTCTGCATATGGGAATGTTAGGCGAGGGCCAGAT
TCAGGTGGTTGCAGAATCCAATGA

Peptide Sequence

PEP ID

Os03t0169800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:3744487:3746086:-1 gene:Os03g0169800 transcript:Os03t0169800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HNH endonuclease domain containing protein. (Os03t0169800-01)
Sequence

MVGRKPLRRRRHDAPPSPPLFGATPRPTSPRSSSASVAAVAEELDGLLLTAPRPSASSSE
PRSFPYVVKQRCWEKAERVAGRDPERWRRDALGNVVFRKLVGCPGCLCHDYDHIVPYSKG
GKSTLENCQVLQATVNRSKGNKTELSKSELIQKSAYCRVSGRDMDLLELSAYGNVRRGPD
SGGCRIQ

Transcript Sequence

Transcript ID

Os03t0169800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3744487:3746086:-1 gene:Os03g0169800 gene_biotype:protein_coding transcript_biotype:protein_coding description:HNH endonuclease domain containing protein. (Os03t0169800-01)
Sequence

ATCGAATCCGAGGAGATAGGGAGATAATGGTGGGGAGGAAGCCGCTGCGCCGGCGGCGGC
ACGACGCGCCGCCCTCGCCGCCGTTGTTCGGGGCCACGCCTCGGCCGACCTCCCCTCGGT
CCTCCTCCGCCTCCGTGGCCGCGGTCGCGGAGGAGCTGGACGGCCTGCTCCTCACGGCGC
CGCGGCCGTCGGCGTCGTCGTCGGAGCCGCGGAGCTTCCCCTACGTGGTGAAGCAGCGGT
GCTGGGAGAAGGCGGAGCGGGTGGCCGGGCGCGACCCGGAGAGGTGGCGCCGCGACGCGC
TCGGCAACGTCGTCTTCCGCAAGCTCGTCGGCTGCCCCGGATGCCTCTGCCACGACTACG
ACCACATCGTCCCCTACTCCAAGGGTGGGAAGAGCACATTGGAGAACTGCCAGGTTTTGC
AGGCTACTGTAAACCGGTCTAAAGGGAACAAAACAGAGTTATCCAAATCTGAGCTCATAC
AGAAGAGTGCCTATTGTAGGGTCTCAGGACGTGATATGGATCTTCTTGAACTCTCTGCAT
ATGGGAATGTTAGGCGAGGGCCAGATTCAGGTGGTTGCAGAATCCAATGAAGACGATGGG
TACGTCTGAAGAGTGATGATAATCAGTTTCAAAAGGCTGCCTGCCTACCTCAAATCTGAT
AGGAAAAATCCCAGCTGATGTTTGTGCCAAATATGTATACTCCCAGCTTTATGGGCATTC
ATCATCCATTTTCTAAGGATTGACCATCAGGAATGTTATGAATTTTGTCATCTTAGCATA
CTTAACGGATCCTGATTTAAGGCATATTTTATTTTGTATTACATACCATAGTTCCAAGTG
CGGTCAGTGTAAACATGTGTCGACGCATTTGTTTTAAATGTGACATCACATTCGTGCC