Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0169500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3729174:3733685:1 gene:Os03g0169500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE A4 description:Similar to Cellulose synthase-like A1. (Os03t0169500-01)
Sequence	ATGGAGGGGCAGTGGGGGCGGTGGCGGCTCGCCGCAGCAGCAGCCGCCTCCTCCTCGGGG GACCAGATCGCGGCGGCGTGGGCGGTGGTGCGGGCGCGGGCGGTGGCGCCGGTGCTGCAG TTCGCGGTGTGGGCGTGCATGGCGATGTCGGTGATGCTGGTGCTAGAGGTGGCCTACATG AGCCTCGTCAGCCTCGTCGCCGTCAAGCTGCTGCGGCGGGTGCCGGAGCGGAGGTACAAG TGGGAGCCCATTACCACTGGGAGCGGCGGCGTCGGCGGCGGCGATGGCGAAGACGAGGAG GCGGCGACGGGCGGGCGGGAGGCGGCGGCGTTCCCGATGGTGCTCGTGCAGATCCCCATG TACAATGAGAAGGAGGTGTACAAGCTCTCTATTGGAGCTGCATGTGCTCTCACGTGGCCT CCGGACCGTATTATAATCCAAGTCTTGGATGATTCCACTGATCCGGCCATTAAGGATCTA GTGGAGCTTGAGTGCAAGGATTGGGCGAGAAAAGAAATTAACATAAAGTATGAAATCAGA GATAACAGGAAGGGATACAAAGCAGGAGCCTTGAAGAAGGGCATGGAACATATCTATACC CAACAGTGCGATTTTGTTGCCATTTTCGATGCAGATTTCCAACCTGAATCTGATTTCCTT CTAAAAACAATACCATTTCTTGTGCATAACCCAAAGATTGGTCTGGTTCAGACACGTTGG GAGTTTGTGAACTATGATGTTTGCCTTATGACAAGGATACAAAAGATGTCACTGGACTAT CATTTCAAAGTAGAGCAGGAATCAGGCTCATCTATGCACTCATTCTTTGGGTTCAACGGT ACTGCTGGTGTGTGGCGGGTATCAGCTATTAACGAAGCAGGAGGTTGGAAGGATCGCACA ACTGTGGAAGACATGGACTTGGCTGTACGGGCAAGCCTCAAGGGATGGCAATTCCTGTAT GTTGGTGATATAAGGGTTAAGAGTGAACTCCCAAGTACCTTCAAAGCCTACCGACATCAG CAGCATAGATGGACTTGTGGTGCTGCCAACCTCTTCAGAAAAATGGCAACGGAAATTGCC AAAAACAAGGGCGTATCTGTATGGAAAAAACTTCATCTACTCTACAGCTTTTTCTTCGTA AGGAGGGTCGTCGCTCCCATCCTGACCTTCCTGTTCTACTGTGTTGTGATTCCGCTGTCT GTCATGGTCCCTGAAGTCAGCATTCCTGTCTGGGGGATGGTCTACATTCCCACTGCCATT ACCATCATGAACGCCATCAGAAATCCTGGGTCCATCCATCTGATGCCTTTTTGGATTCTA TTCGAGAATGTCATGGCCATGCACCGGATGCGTGCAGCTCTAACCGGCTTGCTCGAGACC ATGAATGTCAATCAGTGGGTGGTTACTGAAAAGGTTGGTGATCATGTGAAGGACAAGCTT GAAGTCCCTCTTCTTGAACCATTGAAGCCAACAGACTGCGTCGAGAGGATTTACATTCCT GAGCTTATGGTCGCGTTCTACCTCCTGGTATGCGCGTCTTACGATTTGGTGCTCGGGGCC AAGCACTACTACCTGTACATCTACCTCCAGGCATTTGCTTTCATTGCTCTGGGATTCGGT TTCGCTGGGACATCTACCCCCTGTTCATAG

Peptide Sequence

PEP ID	Os03t0169500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3729174:3733685:1 gene:Os03g0169500 transcript:Os03t0169500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE A4 description:Similar to Cellulose synthase-like A1. (Os03t0169500-01)
Sequence	MEGQWGRWRLAAAAAASSSGDQIAAAWAVVRARAVAPVLQFAVWACMAMSVMLVLEVAYM SLVSLVAVKLLRRVPERRYKWEPITTGSGGVGGGDGEDEEAATGGREAAAFPMVLVQIPM YNEKEVYKLSIGAACALTWPPDRIIIQVLDDSTDPAIKDLVELECKDWARKEINIKYEIR DNRKGYKAGALKKGMEHIYTQQCDFVAIFDADFQPESDFLLKTIPFLVHNPKIGLVQTRW EFVNYDVCLMTRIQKMSLDYHFKVEQESGSSMHSFFGFNGTAGVWRVSAINEAGGWKDRT TVEDMDLAVRASLKGWQFLYVGDIRVKSELPSTFKAYRHQQHRWTCGAANLFRKMATEIA KNKGVSVWKKLHLLYSFFFVRRVVAPILTFLFYCVVIPLSVMVPEVSIPVWGMVYIPTAI TIMNAIRNPGSIHLMPFWILFENVMAMHRMRAALTGLLETMNVNQWVVTEKVGDHVKDKL EVPLLEPLKPTDCVERIYIPELMVAFYLLVCASYDLVLGAKHYYLYIYLQAFAFIALGFG FAGTSTPCS

Transcript Sequence

Transcript ID	Os03t0169500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3729174:3733685:1 gene:Os03g0169500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE A4 description:Similar to Cellulose synthase-like A1. (Os03t0169500-01)
Sequence	CCACCATTTCCACACCCGCCCAAAGCTGAGCAACGCACGCGCGCGCGCATGGAGGGGCAG TGGGGGCGGTGGCGGCTCGCCGCAGCAGCAGCCGCCTCCTCCTCGGGGGACCAGATCGCG GCGGCGTGGGCGGTGGTGCGGGCGCGGGCGGTGGCGCCGGTGCTGCAGTTCGCGGTGTGG GCGTGCATGGCGATGTCGGTGATGCTGGTGCTAGAGGTGGCCTACATGAGCCTCGTCAGC CTCGTCGCCGTCAAGCTGCTGCGGCGGGTGCCGGAGCGGAGGTACAAGTGGGAGCCCATT ACCACTGGGAGCGGCGGCGTCGGCGGCGGCGATGGCGAAGACGAGGAGGCGGCGACGGGC GGGCGGGAGGCGGCGGCGTTCCCGATGGTGCTCGTGCAGATCCCCATGTACAATGAGAAG GAGGTGTACAAGCTCTCTATTGGAGCTGCATGTGCTCTCACGTGGCCTCCGGACCGTATT ATAATCCAAGTCTTGGATGATTCCACTGATCCGGCCATTAAGGATCTAGTGGAGCTTGAG TGCAAGGATTGGGCGAGAAAAGAAATTAACATAAAGTATGAAATCAGAGATAACAGGAAG GGATACAAAGCAGGAGCCTTGAAGAAGGGCATGGAACATATCTATACCCAACAGTGCGAT TTTGTTGCCATTTTCGATGCAGATTTCCAACCTGAATCTGATTTCCTTCTAAAAACAATA CCATTTCTTGTGCATAACCCAAAGATTGGTCTGGTTCAGACACGTTGGGAGTTTGTGAAC TATGATGTTTGCCTTATGACAAGGATACAAAAGATGTCACTGGACTATCATTTCAAAGTA GAGCAGGAATCAGGCTCATCTATGCACTCATTCTTTGGGTTCAACGGTACTGCTGGTGTG TGGCGGGTATCAGCTATTAACGAAGCAGGAGGTTGGAAGGATCGCACAACTGTGGAAGAC ATGGACTTGGCTGTACGGGCAAGCCTCAAGGGATGGCAATTCCTGTATGTTGGTGATATA AGGGTTAAGAGTGAACTCCCAAGTACCTTCAAAGCCTACCGACATCAGCAGCATAGATGG ACTTGTGGTGCTGCCAACCTCTTCAGAAAAATGGCAACGGAAATTGCCAAAAACAAGGGC GTATCTGTATGGAAAAAACTTCATCTACTCTACAGCTTTTTCTTCGTAAGGAGGGTCGTC GCTCCCATCCTGACCTTCCTGTTCTACTGTGTTGTGATTCCGCTGTCTGTCATGGTCCCT GAAGTCAGCATTCCTGTCTGGGGGATGGTCTACATTCCCACTGCCATTACCATCATGAAC GCCATCAGAAATCCTGGGTCCATCCATCTGATGCCTTTTTGGATTCTATTCGAGAATGTC ATGGCCATGCACCGGATGCGTGCAGCTCTAACCGGCTTGCTCGAGACCATGAATGTCAAT CAGTGGGTGGTTACTGAAAAGGTTGGTGATCATGTGAAGGACAAGCTTGAAGTCCCTCTT CTTGAACCATTGAAGCCAACAGACTGCGTCGAGAGGATTTACATTCCTGAGCTTATGGTC GCGTTCTACCTCCTGGTATGCGCGTCTTACGATTTGGTGCTCGGGGCCAAGCACTACTAC CTGTACATCTACCTCCAGGCATTTGCTTTCATTGCTCTGGGATTCGGTTTCGCTGGGACA TCTACCCCCTGTTCATAGCACAGCAATACATCATCTTCACTTCCAAACGATCCATTCTTC CCCAATTCATGATTGCATCCTGTAACTACAAGCAATTCTTTTGTAAATGAAAAACAGGAC AAGCTCTCACCACAAAAATCTCACCTGTAAACATTCCAGTTTTTACCATTGTTGTATGCA TTTTCTACAGCCCCTGCAGTGCAGGTGAGCTTGATGTGT