Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0169400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:3727764:3728922:-1 gene:Os03g0169400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L18/L5 domain containing protein. (Os03t0169400-01)
Sequence

ATGGCATCGCTCCGCGCGGCCCCCGGGCTGCCATTCTCGCCGCGCCCGGCGTGCTGCCGC
CCTCCCAGCTCGCCTGGCGTGCAGTTCTTCACTCCGGCTTCTGCAGGCGGCGCCGGCGGA
GTCGGGCGCCGGCGCTCGTACCCGAGGATCGAGGCCACGGCGAGGCACGGCGCGAGGAAG
GAGAACCCCAAGGTCAGGAACCGCAGGCTGCAGAAGAAGTTCAATGGCACGGCGACGAAG
CCGAGGCTGTCCGTGTTCTGCTCCAACAGGCAGCTCTACGCCATGCTCGTCGACGACCAC
AACAGGAAGATCCTCTTCTACGGCAGCACGCTGCAGAAGGCCATCTGCGGCGACCCGCCC
TGCGGCGCCGTGGAGGCAGCTGGGAGGGTCGGGGAGGAGCTCATCAGGGCGTGCAAGGAG
CTGGACATCACCGAGATCTCGTCCTACGACCGCAACGGGTTTGCTCGAGGGGAGAAGATG
ATGGCGTTCGAGGTTCCGGTCTCGCAGTACGGGTTCCTGCCAAGATAG

Peptide Sequence

PEP ID

Os03t0169400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:3727764:3728922:-1 gene:Os03g0169400 transcript:Os03t0169400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L18/L5 domain containing protein. (Os03t0169400-01)
Sequence

MASLRAAPGLPFSPRPACCRPPSSPGVQFFTPASAGGAGGVGRRRSYPRIEATARHGARK
ENPKVRNRRLQKKFNGTATKPRLSVFCSNRQLYAMLVDDHNRKILFYGSTLQKAICGDPP
CGAVEAAGRVGEELIRACKELDITEISSYDRNGFARGEKMMAFEVPVSQYGFLPR

Transcript Sequence

Transcript ID

Os03t0169400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3727764:3728922:-1 gene:Os03g0169400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L18/L5 domain containing protein. (Os03t0169400-01)
Sequence

ACCGGGATTCCGCGCCGCACCTGCTCGACGGATTGCCTGCCCACCCCAAGCAGCTAGCCA
AGGTCTCCACCCGTGGGCGTGCCATGGCATCGCTCCGCGCGGCCCCCGGGCTGCCATTCT
CGCCGCGCCCGGCGTGCTGCCGCCCTCCCAGCTCGCCTGGCGTGCAGTTCTTCACTCCGG
CTTCTGCAGGCGGCGCCGGCGGAGTCGGGCGCCGGCGCTCGTACCCGAGGATCGAGGCCA
CGGCGAGGCACGGCGCGAGGAAGGAGAACCCCAAGGTCAGGAACCGCAGGCTGCAGAAGA
AGTTCAATGGCACGGCGACGAAGCCGAGGCTGTCCGTGTTCTGCTCCAACAGGCAGCTCT
ACGCCATGCTCGTCGACGACCACAACAGGAAGATCCTCTTCTACGGCAGCACGCTGCAGA
AGGCCATCTGCGGCGACCCGCCCTGCGGCGCCGTGGAGGCAGCTGGGAGGGTCGGGGAGG
AGCTCATCAGGGCGTGCAAGGAGCTGGACATCACCGAGATCTCGTCCTACGACCGCAACG
GGTTTGCTCGAGGGGAGAAGATGATGGCGTTCGAGGTTCCGGTCTCGCAGTACGGGTTCC
TGCCAAGATAGCAGCAGCAAATTGTTAGAGATAGAGATGCCTTTCTGTAGATAGGATAGT
AATAGTGTGTATTTGATGAAAAATGAACTGGAAACATGTGAATTGGTGGCTGTGTGTTAC
TGTGATGCATCAGTTTCTTGGAGAGCATGCAAGTTAATTCAAGTTTCAC