Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0169000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3717384:3721105:-1 gene:Os03g0169000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to F16A14.24. (Os03t0169000-01);Similar to predicted protein. (Os03t0169000-02)
Sequence	ATGGCGAGGTCGAGGCCTAGGGTTTGGCTCCTGGCGGGGTGCAGCGCCGTGCTGCTGTGG GCCTTCGTCGGGCAGCTCGTGGCCGTCGGACGCCTCCTCGCCTTGTTCGGCCTCGCCGGC GACGCGGAGCCCTCGCCTCCGCCCACCGCGCTTCCGCCTCGAAGAGTCTATAAGAGTAAT GGTTATCTGAAGGTATCTTGCAATGGGGGTTTGAATCAGATGCGTTCAGAGATATGTGAC ATGGTGGCGGTTGCTCGCTTGCTAAACCTTACAATGGTTGTCCCAGAACTAGACAAGAGG TCATTCTGGGCTGATCAAAGCAATTTTGAAGATATATTTGATGTTAAACATTTCATTGAC ACATTAAGAGATGAAGTGCACATTGTTAAACAGCTTCCGAAGAGGTTTGGTCCAGAGGAT TCAAACAATATACTTAATATGCCACCTGTGAGCTGGTCTGATGAAAAATATTACTTGCAT CAGATCTTACCATTATTCAGCAAATATAGCGTCATCCATTTTAACAAGACGGATGCTCGG TTAGCAAACAATGGTATCAGTACACAGCTTCAACTACTTAGGTGCCGTGTTAATTTTCAT GCACTGAAGTTCACCCCTCAAATTGAGGCCTTGGGGAATAAACTGGTGCAGAAACTTCAG GCCAAGGGATCATTTGCAGCCTTGCATTTACGCTATGAGATGGACATGCTGGCCTTTTCT GGTTGCAATCATGGTCTTTCTCAAGAAGAAGCTGAAGAGCTCAAAAGAATGAGATATGCT TATCCATGGTGGAGAGAAAAGGAAATTGATTCACAAGCTAAGAGATTGCAAGGGCTATGC CCACTTACACCTGAGGAGACATCTTTTATTCTGAAAGCTCTGGGATTTCAGAAGGACACT CTCATATACATTGCTGCCGGTGAAATTTATGGGGGAGAAAAAAGATTAGAACCATTACAA GCTGCATTTCCAAAACTTGTAAGAAAGGAGACGCTGCTAGACTTGGAAGCTCTACGACAA TTCCAGAACCATTCTTCTCAGATGGCTGCACTTGACTTCATTGTATCCACAGCCAGTGAT ATTTTCATTCCTACTTATGATGGTAACATGGCAAAACTTGTTGAAGGTCACCGGAGGTTC CTGGGTTTCAGGAGAAGTGTGCTACTAGACCGACAGAAATTGGTTGGATTTATAGATCTG TACAACAATAAGACAATCTCTTGGAACAATTTTGCATCTTCTGTCCAGGAAACTCATAGA AATCGTGTAGTTCAACCGTCCTGTCGGCAGAAACTTGAAAATAAGCCAAAAGAAGAGGAT TACTTTTATGCTAACCCACACGAATGCCTGGCCAATTCAAGATTTTGCAGCCGAACCAAG GATGCAATCAGTGTAAGGTGA

Peptide Sequence

PEP ID	Os03t0169000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3717384:3721105:-1 gene:Os03g0169000 transcript:Os03t0169000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to F16A14.24. (Os03t0169000-01);Similar to predicted protein. (Os03t0169000-02)
Sequence	MARSRPRVWLLAGCSAVLLWAFVGQLVAVGRLLALFGLAGDAEPSPPPTALPPRRVYKSN GYLKVSCNGGLNQMRSEICDMVAVARLLNLTMVVPELDKRSFWADQSNFEDIFDVKHFID TLRDEVHIVKQLPKRFGPEDSNNILNMPPVSWSDEKYYLHQILPLFSKYSVIHFNKTDAR LANNGISTQLQLLRCRVNFHALKFTPQIEALGNKLVQKLQAKGSFAALHLRYEMDMLAFS GCNHGLSQEEAEELKRMRYAYPWWREKEIDSQAKRLQGLCPLTPEETSFILKALGFQKDT LIYIAAGEIYGGEKRLEPLQAAFPKLVRKETLLDLEALRQFQNHSSQMAALDFIVSTASD IFIPTYDGNMAKLVEGHRRFLGFRRSVLLDRQKLVGFIDLYNNKTISWNNFASSVQETHR NRVVQPSCRQKLENKPKEEDYFYANPHECLANSRFCSRTKDAISVR

Transcript Sequence

Transcript ID	Os03t0169000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3717384:3721105:-1 gene:Os03g0169000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to F16A14.24. (Os03t0169000-01);Similar to predicted protein. (Os03t0169000-02)
Sequence	AAACGGAAAAAGAAAAAAAAAATCGCAGCTAGGCCTCTCCCGAATCTTCTGGAACCTTCT CGAACCAGGAGGCGGAGGAGGAGCTGCTGCTGCCGCGGCTGCCAATGCCGGTGGCGGGGA TCAGGAGGAGGAGGAGGAGGAGGGGGCGGTGGATGTAGGGTGGGGGAGCGATGGCGAGGT CGAGGCCTAGGGTTTGGCTCCTGGCGGGGTGCAGCGCCGTGCTGCTGTGGGCCTTCGTCG GGCAGCTCGTGGCCGTCGGACGCCTCCTCGCCTTGTTCGGCCTCGCCGGCGACGCGGAGC CCTCGCCTCCGCCCACCGCGCTTCCGCCTCGAAGAGTCTATAAGAGTAATGGTTATCTGA AGGTATCTTGCAATGGGGGTTTGAATCAGATGCGTTCAGAGATATGTGACATGGTGGCGG TTGCTCGCTTGCTAAACCTTACAATGGTTGTCCCAGAACTAGACAAGAGGTCATTCTGGG CTGATCAAAGCAATTTTGAAGATATATTTGATGTTAAACATTTCATTGACACATTAAGAG ATGAAGTGCACATTGTTAAACAGCTTCCGAAGAGGTTTGGTCCAGAGGATTCAAACAATA TACTTAATATGCCACCTGTGAGCTGGTCTGATGAAAAATATTACTTGCATCAGATCTTAC CATTATTCAGCAAATATAGCGTCATCCATTTTAACAAGACGGATGCTCGGTTAGCAAACA ATGGTATCAGTACACAGCTTCAACTACTTAGGTGCCGTGTTAATTTTCATGCACTGAAGT TCACCCCTCAAATTGAGGCCTTGGGGAATAAACTGGTGCAGAAACTTCAGGCCAAGGGAT CATTTGCAGCCTTGCATTTACGCTATGAGATGGACATGCTGGCCTTTTCTGGTTGCAATC ATGGTCTTTCTCAAGAAGAAGCTGAAGAGCTCAAAAGAATGAGATATGCTTATCCATGGT GGAGAGAAAAGGAAATTGATTCACAAGCTAAGAGATTGCAAGGGCTATGCCCACTTACAC CTGAGGAGACATCTTTTATTCTGAAAGCTCTGGGATTTCAGAAGGACACTCTCATATACA TTGCTGCCGGTGAAATTTATGGGGGAGAAAAAAGATTAGAACCATTACAAGCTGCATTTC CAAAACTTGTAAGAAAGGAGACGCTGCTAGACTTGGAAGCTCTACGACAATTCCAGAACC ATTCTTCTCAGATGGCTGCACTTGACTTCATTGTATCCACAGCCAGTGATATTTTCATTC CTACTTATGATGGTAACATGGCAAAACTTGTTGAAGGTCACCGGAGGTTCCTGGGTTTCA GGAGAAGTGTGCTACTAGACCGACAGAAATTGGTTGGATTTATAGATCTGTACAACAATA AGACAATCTCTTGGAACAATTTTGCATCTTCTGTCCAGGAAACTCATAGAAATCGTGTAG TTCAACCGTCCTGTCGGCAGAAACTTGAAAATAAGCCAAAAGAAGAGGATTACTTTTATG CTAACCCACACGAATGCCTGGCCAATTCAAGATTTTGCAGCCGAACCAAGGATGCAATCA GTGTAAGGTGAGCGTCAAGTCAAGTTGTAACCTCACCGAGCCAAGTTATTATGGCGACGT GCAGTGGACTGAAGCCAGCAGCACAGCAGGCAGAGTCCATCTTGATCGTTTAACCGGTTT TCCTGATCTCCTGTTGTATAGGTCAGCCTTTTCGCTTTGCGATTGATTGATTCATTTTTC ACTTGCCGAATGCAGAATATGAATGCCCTTCTAAAGCATGTAAATTGGGCTGGTTGTTTA CTGTTCGTGTTCATGACAATCAATTAATTCATGATGATAGCCAAAGCAAAATACATGCTT TTCTATGAAAAAAAAATTCGC