Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0168300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:3683172:3685295:-1 gene:Os03g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1997 domain containing protein. (Os03t0168300-01)
Sequence

ATGGCATTGCTAAGTGTCAGCTCATCTCATCATGCCATCCATCCAGGTAGTAGCAGGAGC
ATGCAGTGCATCTGCACCAGGGTGACACCATCCAGATCAGTGGGAGAAATATCAAGATCA
AGATCAAGAAATGATCTTCCTCTGGGTGTTTCACCGTCGTCGAGGATGCTCACGACATGT
ACTCTCAAGACTCCTTCCTATGGCAACAAGTCGAAGTCGAAGGAGAAGATCAATCCGAGA
GACATGTTCACCTTCTCCTACAGATTCAACACTGACATCCCCATGACCGAGACTCCAGGG
GCATCCATCGATGAGTACCTTCAGAACAGGCCCAGGATTGTTGGAGCCGTGTTCCCTGAT
AAGCGCAAGAGAACCAAGCTCAGTGATGAAGAATGGAGCGTGCAGCTTCTGCCGATCCAG
TTCCTGTTCCTGTCGGCGTCGCCGGTGATCGTGATGCGGTTCGTAAGCAAATCCGGCGGC
AAGGAGTACCCGCCGCACGTCCCCGTCAAGGCAACCAGCCTCCTGCTCATGGAAGTGACG
GACTACAAGCTGGACGGGCTGGACAGCAACGCGATGCCGTCGCACCTCGCCCTGACCGTC
CGCGGGTCGCTGTACCCGCGGCCGGAGGGGAGGAAGAGCCTGAGGGGCCACGTCGAGATG
AGCGTCGGCTTCAACCTGCCGCCGGTGCTCGCGCTGGTGCCGGAGGGCGTCATCAGAGGC
GTCGGCGAGACGGTGCTGAGGCAGCTAGCACTGCAGATGAAGCAGGATTTCGACAATGGC
CTGGCAGCCGATTTCAAGAGGTACAGGAGGGAGAAGCTAACTGAAAAGAAGACTACACCC
TGA

Peptide Sequence

PEP ID

Os03t0168300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:3683172:3685295:-1 gene:Os03g0168300 transcript:Os03t0168300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1997 domain containing protein. (Os03t0168300-01)
Sequence

MALLSVSSSHHAIHPGSSRSMQCICTRVTPSRSVGEISRSRSRNDLPLGVSPSSRMLTTC
TLKTPSYGNKSKSKEKINPRDMFTFSYRFNTDIPMTETPGASIDEYLQNRPRIVGAVFPD
KRKRTKLSDEEWSVQLLPIQFLFLSASPVIVMRFVSKSGGKEYPPHVPVKATSLLLMEVT
DYKLDGLDSNAMPSHLALTVRGSLYPRPEGRKSLRGHVEMSVGFNLPPVLALVPEGVIRG
VGETVLRQLALQMKQDFDNGLAADFKRYRREKLTEKKTTP

Transcript Sequence

Transcript ID

Os03t0168300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3683172:3685295:-1 gene:Os03g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1997 domain containing protein. (Os03t0168300-01)
Sequence

ACAACTTCCATCTCTGAAGAAAAAGAAGAGAAAGGATACCATTACAGGGAAGAAGATGGC
ATTGCTAAGTGTCAGCTCATCTCATCATGCCATCCATCCAGGTAGTAGCAGGAGCATGCA
GTGCATCTGCACCAGGGTGACACCATCCAGATCAGTGGGAGAAATATCAAGATCAAGATC
AAGAAATGATCTTCCTCTGGGTGTTTCACCGTCGTCGAGGATGCTCACGACATGTACTCT
CAAGACTCCTTCCTATGGCAACAAGTCGAAGTCGAAGGAGAAGATCAATCCGAGAGACAT
GTTCACCTTCTCCTACAGATTCAACACTGACATCCCCATGACCGAGACTCCAGGGGCATC
CATCGATGAGTACCTTCAGAACAGGCCCAGGATTGTTGGAGCCGTGTTCCCTGATAAGCG
CAAGAGAACCAAGCTCAGTGATGAAGAATGGAGCGTGCAGCTTCTGCCGATCCAGTTCCT
GTTCCTGTCGGCGTCGCCGGTGATCGTGATGCGGTTCGTAAGCAAATCCGGCGGCAAGGA
GTACCCGCCGCACGTCCCCGTCAAGGCAACCAGCCTCCTGCTCATGGAAGTGACGGACTA
CAAGCTGGACGGGCTGGACAGCAACGCGATGCCGTCGCACCTCGCCCTGACCGTCCGCGG
GTCGCTGTACCCGCGGCCGGAGGGGAGGAAGAGCCTGAGGGGCCACGTCGAGATGAGCGT
CGGCTTCAACCTGCCGCCGGTGCTCGCGCTGGTGCCGGAGGGCGTCATCAGAGGCGTCGG
CGAGACGGTGCTGAGGCAGCTAGCACTGCAGATGAAGCAGGATTTCGACAATGGCCTGGC
AGCCGATTTCAAGAGGTACAGGAGGGAGAAGCTAACTGAAAAGAAGACTACACCCTGAAA
GTTTTTTCAAGCATTTCATTTCAAAAATAGAAGATCTTTTCCAAGCATTCACTGCCAGTA
GTAATAGAGATGGCAGTCACTACACCAAATTGTTTGGAGCTCATCTGATCATCAGCAATT
CAGCATGATGGCAACATAATTGTATTGTTCATCAAGCCTCAAGAAAAGATGGAGAGAATA
ACTTAACAGATCTCATTTATTCATTGTAAACTGAAGCATTTAGAATGTACATAATGGCAA
GAATAATCAATTTACTGAGATTGTTAATATCTCGAGCTATTGGAC