Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0168200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3681100:3683235:1 gene:Os03g0168200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to F16A14.21. (Os03t0168200-01)
Sequence	ATGGCAGCTTGCTTGCCATCCCTCTCACCGCCGCCGCATCAGGCGCCGGTGCCGGCGGCG ACGACCGCGCTGGCGGGGAACCTGACCTCGTCCCTCCTCTCCCTGCCCCCGCCGCTGCCC CGCCTCGCCGTCTCGCACCGCAGGGCGGTGGTCGCCGCGGCCTCGTCCCGGCCCCCGCCC CCGCCATCGCGGGAGGGGGGTGATGGTGGTGGTGAGGAGGAGGAGGAGGTGGAGAGGGCG ATGGGGATGGACGGCGGCATCCCTGGCACCTCCGGCGAGTTCCTGCGCCGCGTCTCCTCC CGCGCGTACGGCATGCGGCGCCACCTCATGGAATCGCTCGACTCCCTCGCCTACGATGTG TTGGAGACAAACCCATGGAGAGAAGACTCCAAACCAGTCTATGTACTGGCTAGAAGAGAT AACCATCTATGGACAATGAAAACCCGTAGGAGTCGCAGTGAAGTTGAAAGGGAACTTGGA ATGCTCTTAAAGGGAGGGGGTTCAGGAGTTGGGACTAAATCAAAATACTCTGGTTCCAAG TTTAACATGCTTGTTGAAGATATCAGAGAGGGAATACTGGTATTTGAAGACGAGGACGAT GCTGCAAAATACTGTGACATTCTACAGGGTGGCGGCCAAGGTTGTGAGGGGATTGCAGAG ATAGAGGCATCATCGGTTTTCAACATCTGCCATAAAATGAAAGCTCTTGCCGTCCTTTTC CGTCGTGGTAGGACCCCTCCATTGCCTCAAAGCCTTGAGCGCGACTTAAGGGCAAGAAAG AGATCATTGGAAGACTAG

Peptide Sequence

PEP ID	Os03t0168200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3681100:3683235:1 gene:Os03g0168200 transcript:Os03t0168200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to F16A14.21. (Os03t0168200-01)
Sequence	MAACLPSLSPPPHQAPVPAATTALAGNLTSSLLSLPPPLPRLAVSHRRAVVAAASSRPPP PPSREGGDGGGEEEEEVERAMGMDGGIPGTSGEFLRRVSSRAYGMRRHLMESLDSLAYDV LETNPWREDSKPVYVLARRDNHLWTMKTRRSRSEVERELGMLLKGGGSGVGTKSKYSGSK FNMLVEDIREGILVFEDEDDAAKYCDILQGGGQGCEGIAEIEASSVFNICHKMKALAVLF RRGRTPPLPQSLERDLRARKRSLED

Transcript Sequence

Transcript ID	Os03t0168200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3681100:3683235:1 gene:Os03g0168200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to F16A14.21. (Os03t0168200-01)
Sequence	ACGTTCCACTCTTCTCTTCTCCCGATTTTACTCCCAACTTTTTTTTTCCTCTCTCTCTCT CTCTCGATTTTCTCATCTCCACTGCTCCACGCTTCCAGGGAAGAACGTAGAAATGGCAGC TTGCTTGCCATCCCTCTCACCGCCGCCGCATCAGGCGCCGGTGCCGGCGGCGACGACCGC GCTGGCGGGGAACCTGACCTCGTCCCTCCTCTCCCTGCCCCCGCCGCTGCCCCGCCTCGC CGTCTCGCACCGCAGGGCGGTGGTCGCCGCGGCCTCGTCCCGGCCCCCGCCCCCGCCATC GCGGGAGGGGGGTGATGGTGGTGGTGAGGAGGAGGAGGAGGTGGAGAGGGCGATGGGGAT GGACGGCGGCATCCCTGGCACCTCCGGCGAGTTCCTGCGCCGCGTCTCCTCCCGCGCGTA CGGCATGCGGCGCCACCTCATGGAATCGCTCGACTCCCTCGCCTACGATGTGTTGGAGAC AAACCCATGGAGAGAAGACTCCAAACCAGTCTATGTACTGGCTAGAAGAGATAACCATCT ATGGACAATGAAAACCCGTAGGAGTCGCAGTGAAGTTGAAAGGGAACTTGGAATGCTCTT AAAGGGAGGGGGTTCAGGAGTTGGGACTAAATCAAAATACTCTGGTTCCAAGTTTAACAT GCTTGTTGAAGATATCAGAGAGGGAATACTGGTATTTGAAGACGAGGACGATGCTGCAAA ATACTGTGACATTCTACAGGGTGGCGGCCAAGGTTGTGAGGGGATTGCAGAGATAGAGGC ATCATCGGTTTTCAACATCTGCCATAAAATGAAAGCTCTTGCCGTCCTTTTCCGTCGTGG TAGGACCCCTCCATTGCCTCAAAGCCTTGAGCGCGACTTAAGGGCAAGAAAGAGATCATT GGAAGACTAGAGTCTTTCTGATACATAGTATAGAACTTCTAATTGTATATTCGTCTAGCT GTTGAAGCAAAGGCCCTAGGCCCTGTATACTACGTGGTATGTAGATCCACAATAGCACGT GGTACATACATCCACAATAGCCTAAGAGGAAAGGAAGTCAAATCTGACAGAAAACATGTC CAATAGCTCGAGATATTAACAATCTCAGTAAATTGATTATTCTTGCCATTATGTACATTC T