Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0168100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3678292:3679969:-1 gene:Os03g0168100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN 16 description:Late embryogenesis abundant protein repeat containing protein. (Os03t0168100-01)
Sequence	ATGGCGATCGTGTCGCGGTCGAGGAGGCTGGCGGTGACGCTGCTGCTGCTGCTGTTTGCT GTGGTGGCGGCGGCCGCCGTGGCGACGAAGGCGGAGGCTGGCACGGAGGACGCGGCGAGC AAGGAGGACGAGTCGTGGACGGGCTGGGCCAAGGAGAAGATCACCGAGGGGCTCGGGCTG AAGCACCACGTCGCCGACGTCGACGAGGAGGAGGACGCCGCGCGCAAGGCCGGCCACGCC GCCAAGTCCGCCCAGCACACCGCCTCCGAGGCAGGGAGGCAGACGAGCAAGAAGGCCGGG GACGCGAAGGAGGCGGCGGAGGCGACGGCGTCGGGCGCGTCGAGCAAGGCTGAGCAGGCA AAGGAGAAGACGAAGGAGGCGGCGAAGGGCGCCGCCGGCGAGGCGACCAGGAGAGCGGAG CAGGCCAAGCACAAGACCAAGGAGGCCGCCGAGGCGGCCGGCGAGAGGGGCGCCGAGGTG CACGAGCAGTCGAAGCAGGGCAAGGCCAAGGTCGAAGAGACGGCCAAGGAGAAGGCCGGC GAGGGGTACGACGCCGCCAAGGACAAGGCCGGCAAGGCGCAGGAGACTCTCCGGCAATCC ACCGACGCCGCCAAGGACAAGGCCGGCAAGGCGCAGGAGACTCTCCGGCAATCCACCGAC GCCGCCAGGGACAAGGCCGGCAAGGCGCAGGAGACGCTCCGGCAATCCACCGACGCCGCC GCGGAGAAGGCCGGGGCGGCGAAGGACAGCGCGTGGGAGAGGACCAGCTCGGCGAAGGAC GCCGCGGCGGAGAAGGCCGGGTCGGCGAAGGACGCGGCGTGGGAGAAGACAAGCTCGGCG AAGGACGCCGCGGCGGAGAAGGCCGGGGCGGCGAAGGACGCGGCGCGGGAGAAGGCGGAG GCGGCCGGCGAGAAGGCGAGGCAGTCCAAGGAGGCGGCGAAGGGGAAGGCCGGCGCGGCG AAGGACGCGGCGTGGGAGAAGGCGGAGGCGGCGAAGGACGCCGCGTGGGAGACGGCGGAG GCGGCGAGGGAGAAGGCGAACGAGGGGTACGAGAAGGTGAAGGAGAAGGCGAAGGAGAAG GTGGAGGAGGTGAAGGAGCGCGTCACCGGCGCCGACGACGCCGCCGATCACGGCAAGGAG AAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAGCCCCGCACGGTCGACGAGCTC TGA

Peptide Sequence

PEP ID	Os03t0168100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3678292:3679969:-1 gene:Os03g0168100 transcript:Os03t0168100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN 16 description:Late embryogenesis abundant protein repeat containing protein. (Os03t0168100-01)
Sequence	MAIVSRSRRLAVTLLLLLFAVVAAAAVATKAEAGTEDAASKEDESWTGWAKEKITEGLGL KHHVADVDEEEDAARKAGHAAKSAQHTASEAGRQTSKKAGDAKEAAEATASGASSKAEQA KEKTKEAAKGAAGEATRRAEQAKHKTKEAAEAAGERGAEVHEQSKQGKAKVEETAKEKAG EGYDAAKDKAGKAQETLRQSTDAAKDKAGKAQETLRQSTDAARDKAGKAQETLRQSTDAA AEKAGAAKDSAWERTSSAKDAAAEKAGSAKDAAWEKTSSAKDAAAEKAGAAKDAAREKAE AAGEKARQSKEAAKGKAGAAKDAAWEKAEAAKDAAWETAEAAREKANEGYEKVKEKAKEK VEEVKERVTGADDAADHGKEKKHHHRHVDGKQKPRTVDEL

Transcript Sequence

Transcript ID	Os03t0168100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3678292:3679969:-1 gene:Os03g0168100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN 16 description:Late embryogenesis abundant protein repeat containing protein. (Os03t0168100-01)
Sequence	ACTGTTGGGTTCGCGACTTCTCGTATTCTCTAGCACGCGAAAGCGATTATCTGTTCTTGT TTGGAGGAGTTCACGTACGTCACGAGCAATGGCGATCGTGTCGCGGTCGAGGAGGCTGGC GGTGACGCTGCTGCTGCTGCTGTTTGCTGTGGTGGCGGCGGCCGCCGTGGCGACGAAGGC GGAGGCTGGCACGGAGGACGCGGCGAGCAAGGAGGACGAGTCGTGGACGGGCTGGGCCAA GGAGAAGATCACCGAGGGGCTCGGGCTGAAGCACCACGTCGCCGACGTCGACGAGGAGGA GGACGCCGCGCGCAAGGCCGGCCACGCCGCCAAGTCCGCCCAGCACACCGCCTCCGAGGC AGGGAGGCAGACGAGCAAGAAGGCCGGGGACGCGAAGGAGGCGGCGGAGGCGACGGCGTC GGGCGCGTCGAGCAAGGCTGAGCAGGCAAAGGAGAAGACGAAGGAGGCGGCGAAGGGCGC CGCCGGCGAGGCGACCAGGAGAGCGGAGCAGGCCAAGCACAAGACCAAGGAGGCCGCCGA GGCGGCCGGCGAGAGGGGCGCCGAGGTGCACGAGCAGTCGAAGCAGGGCAAGGCCAAGGT CGAAGAGACGGCCAAGGAGAAGGCCGGCGAGGGGTACGACGCCGCCAAGGACAAGGCCGG CAAGGCGCAGGAGACTCTCCGGCAATCCACCGACGCCGCCAAGGACAAGGCCGGCAAGGC GCAGGAGACTCTCCGGCAATCCACCGACGCCGCCAGGGACAAGGCCGGCAAGGCGCAGGA GACGCTCCGGCAATCCACCGACGCCGCCGCGGAGAAGGCCGGGGCGGCGAAGGACAGCGC GTGGGAGAGGACCAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGTCGGCGAAGGA CGCGGCGTGGGAGAAGACAAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGGCGGC GAAGGACGCGGCGCGGGAGAAGGCGGAGGCGGCCGGCGAGAAGGCGAGGCAGTCCAAGGA GGCGGCGAAGGGGAAGGCCGGCGCGGCGAAGGACGCGGCGTGGGAGAAGGCGGAGGCGGC GAAGGACGCCGCGTGGGAGACGGCGGAGGCGGCGAGGGAGAAGGCGAACGAGGGGTACGA GAAGGTGAAGGAGAAGGCGAAGGAGAAGGTGGAGGAGGTGAAGGAGCGCGTCACCGGCGC CGACGACGCCGCCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAA GCAAAAGCCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACACCGATTA GCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCA CACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAG AACTTGTTTGTATTCTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACTGA AACTTCACTCAAAACTGAATCTTTTGCTGTTTTCCACGG