Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0167800-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:3664712:3669746:1 gene:Os03g0167800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 129 description:Kelch-type beta propeller domain containing protein. (Os03t0167800-01);Kelch-type beta propeller domain containing protein. (Os03t0167800-02)
Sequence

ATGGATGCGGCTGCCGGAGGCGCGCCGCCGCGGCCCGCGGCCGGAATCCGCGTCCGGGTG
CCACTGGTAGAGTCTGTGTCTTGTTACTGCAGGGTAGATGGAGGTCTTAAAACTGTTGTG
AGTGCTAGGAAGTTTGTCCCTGGTGCAAAGCTGTGCATGCAACCTGACATTAAACCAAAC
AAGCGCAAGTCAAGGAGCTCACACAAAGAGAGGTGCCGAACTCAGGCACCACTTCTACCT
GGCCTTCCTGACGACCTAGCTATTACCTGCCTCATGCGGGTCCCTCGACTTGAGCACACA
AATCTTCGGTTAGTCTGTAAACGGTGGAACCGACTGTTATCTGGGAACTATTATTATTCC
TTGCGTAAGAAACTTGGCATGGCAGAAGAATGGGTTTTTGTCTTCAAAAGGGACCGTGAT
CGGAAGATTTCTTGGCATGCCTTTGACCCAGTTCACCAGGTGTGGAAGTCACTCCCTCCA
GTTCCAGCAGAGTATTCAGAGGCCGTGGGCTTTGGCTGTGCTGTTCTTAGTGGCTGCTAT
CTGTACCTGTTTGGTGGCAAAGACCCAGTCCGAGGGTCTATGAGGCGTGTTGTATTTTAC
AATGCTCGGATAAACAAGTGGCTCCGAGCCCCAGATATGCTACAAAAGCGTCACTGCTTT
GGTTCCTGTGTCATAAACAACCGCCTCTATGTTGCTGGTGGGGAGTGTGAAGGGATACAA
AGAACTCTAAGATCTGCTGAATTTTACGACCCAAACAGGAATAGATGGTCTTACATCAGT
GAAATGAGCACGGGAATGGTACCTTTTATTGGAGTTGTATATGATGGCAAATGGTTCCTG
AAAGGGCTTGATTCTCATCGTCAGGTTGTGAGTGAGGTCTATATGCCAACATCCAACGTA
TGGTCAGTCACTGCTGATGAAATGGTTACGGGCTGGCGGAATCCAAGCATTTGCTTTAAT
GGACGTCTTTATTCAGCAGAATGCCGGGACGGATGCAAGCTTAGAGTCTATGATAGGGAC
ACACGATCGTGGACCAGATTCATGGACAGCAGGCGCCATCTGGGCAATTCACGAGCTTTT
GAAGCTGCAGCTCTGGTCTCCCTAAATGGAAAGATCTGCATTATCCGCAACAATATGAGC
ATCACTCTTGTCGATGTCTCAAACACACCAACAGTTATCGAGATTAACAATGCTCACATG
TGGGATGTTTTTGCTCGGAAGGGCCAGCACAGGTCTTTCATAGCAAACTTGTGGTTCACC
ATTGCGGGTCGTAATTTCAAGACTCACATTATCCATTGCCAAGTGCTCCAAGTTTGA

Peptide Sequence

PEP ID

Os03t0167800-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:3664712:3669746:1 gene:Os03g0167800 transcript:Os03t0167800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 129 description:Kelch-type beta propeller domain containing protein. (Os03t0167800-01);Kelch-type beta propeller domain containing protein. (Os03t0167800-02)
Sequence

MDAAAGGAPPRPAAGIRVRVPLVESVSCYCRVDGGLKTVVSARKFVPGAKLCMQPDIKPN
KRKSRSSHKERCRTQAPLLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYS
LRKKLGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCY
LYLFGGKDPVRGSMRRVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQ
RTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDGKWFLKGLDSHRQVVSEVYMPTSNV
WSVTADEMVTGWRNPSICFNGRLYSAECRDGCKLRVYDRDTRSWTRFMDSRRHLGNSRAF
EAAALVSLNGKICIIRNNMSITLVDVSNTPTVIEINNAHMWDVFARKGQHRSFIANLWFT
IAGRNFKTHIIHCQVLQV

Transcript Sequence

Transcript ID

Os03t0167800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3664712:3669746:1 gene:Os03g0167800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 129 description:Kelch-type beta propeller domain containing protein. (Os03t0167800-01);Kelch-type beta propeller domain containing protein. (Os03t0167800-02)
Sequence

TGAACACGCCGCAAGATTCGAAGCCAAACCAACCCAAGCTCCCAGGAGAGGAGAGCATCT
CCTGCATCTGCGGCCTCCCCCATCCCACTGCTGCTGCTGCTGGTTTGAAACCAAGGCGAC
CTCCTCCTGTAGTAGCGAGGAGGAGAGGAGAGGAGGGAGAGGCGGGTTCTTGGCTCCTGG
GGGGCCGAATCGCGGGGGTTCTTGCCTGCCCGGATCGATCCGGCAATGGATGCGGCTGCC
GGAGGCGCGCCGCCGCGGCCCGCGGCCGGAATCCGCGTCCGGGTGCCACTGGTAGAGTCT
GTGTCTTGTTACTGCAGGGTAGATGGAGGTCTTAAAACTGTTGTGAGTGCTAGGAAGTTT
GTCCCTGGTGCAAAGCTGTGCATGCAACCTGACATTAAACCAAACAAGCGCAAGTCAAGG
AGCTCACACAAAGAGAGGTGCCGAACTCAGGCACCACTTCTACCTGGCCTTCCTGACGAC
CTAGCTATTACCTGCCTCATGCGGGTCCCTCGACTTGAGCACACAAATCTTCGGTTAGTC
TGTAAACGGTGGAACCGACTGTTATCTGGGAACTATTATTATTCCTTGCGTAAGAAACTT
GGCATGGCAGAAGAATGGGTTTTTGTCTTCAAAAGGGACCGTGATCGGAAGATTTCTTGG
CATGCCTTTGACCCAGTTCACCAGGTGTGGAAGTCACTCCCTCCAGTTCCAGCAGAGTAT
TCAGAGGCCGTGGGCTTTGGCTGTGCTGTTCTTAGTGGCTGCTATCTGTACCTGTTTGGT
GGCAAAGACCCAGTCCGAGGGTCTATGAGGCGTGTTGTATTTTACAATGCTCGGATAAAC
AAGTGGCTCCGAGCCCCAGATATGCTACAAAAGCGTCACTGCTTTGGTTCCTGTGTCATA
AACAACCGCCTCTATGTTGCTGGTGGGGAGTGTGAAGGGATACAAAGAACTCTAAGATCT
GCTGAATTTTACGACCCAAACAGGAATAGATGGTCTTACATCAGTGAAATGAGCACGGGA
ATGGTACCTTTTATTGGAGTTGTATATGATGGCAAATGGTTCCTGAAAGGGCTTGATTCT
CATCGTCAGGTTGTGAGTGAGGTCTATATGCCAACATCCAACGTATGGTCAGTCACTGCT
GATGAAATGGTTACGGGCTGGCGGAATCCAAGCATTTGCTTTAATGGACGTCTTTATTCA
GCAGAATGCCGGGACGGATGCAAGCTTAGAGTCTATGATAGGGACACACGATCGTGGACC
AGATTCATGGACAGCAGGCGCCATCTGGGCAATTCACGAGCTTTTGAAGCTGCAGCTCTG
GTCTCCCTAAATGGAAAGATCTGCATTATCCGCAACAATATGAGCATCACTCTTGTCGAT
GTCTCAAACACACCAACAGTTATCGAGATTAACAATGCTCACATGTGGGATGTTTTTGCT
CGGAAGGGCCAGCACAGGTCTTTCATAGCAAACTTGTGGTTCACCATTGCGGGTCGTAAT
TTCAAGACTCACATTATCCATTGCCAAGTGCTCCAAGTTTGAGCATGGCTCCATGTGAAG
TTGGAAACTGGGAACATTCTCAAATTTTGAAAGGGCCGATCAATCGGAAGCTGAAATGGG
TGCCAGAACTCCAGCAAAGAGATGGTCTGTTGCCTGAATGAACATCTAGCGATCTCGTTC
CTACTCAATCTCTCCGGTACCGGAAAAATCTCATGCTGGCTGCTGGATGCAGCCATGCAG
GAGAGGAAGTGGGAGCTTCGGTTGTCTATAAACCAAGGTGAAATTTTTTGGGGTGTGAGA
GTAAGAAATATTCCATAGCATCGGTGGTTTGTCCAGTGGTATTCATGATTTCAGTGTGCT
GATGCTTCCTGGTTTGGGGTTGAGCTGATACTGCTGATGATACGGCAGTAATGGTTGCAT
TGGCGGCTGTCATGTTCTACATTTTCGGATAGGAAGGTGGTCCACCTTCATCCTAATCAT
CATGTCTATCTTTCTTTCGGCTTATTAGGCATGTCAAACTGTGTTGTATGATCGTATCAG
CCGACTAGAGTAACAAATGAATAAATGTTTTGTTCAACTGTT