Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0167600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3653709:3657069:1 gene:Os03g0167600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MALE STERILITY 2, male sterility protein 2, defective pollen wall description:Similar to Male sterility protein 2. (Os03t0167600-01)
Sequence	ATGGGGATGAGTTCATGCGTGAACCTATCCCGTGTCGCCGCCGCCGCCGCAGGGAGACGG CCGGGATTTGCCGGTGAGCTGGGAGGTCGCCGTGGTCATGGCAGAAGCGTGCTTCCGGTT GTTGCTGCACTGCCGGTGAGGAGGAAGGGAAGCGGTTGTGGCGTGGCGTGCTGCGTCTCC TCCTCGTCTTCCTCCTCCGTGCACGGCAAGAACTCGGCGGCGGCGGCGGAGGGTCACGCC GGCGGCATTGGGATCGCGGAGTTCCTCGGCGGCAAGAACTTCCTCATCACCGGCGGAACC GGGTTCCTGGCAAAAGTTCTCATCGAGAAGATATTGCGGACGAATCCCGACGTTGGCAAG ATCTACGTGCTGATCAAGGCGAAGGACGGTGACGCAGCACTGAAAAGATTGCACAACGAG GTTGTGGACACAGAATTGTTCAGTCGTTTGCAGGAAATCCATGGCAAGGATTACCACAGC TTCGCGGCAAGAAAGCTGGTGCCTGTAGTCGGAGATGTCAGAGAAGCCAACGTTGGCATC GCCCCTGAGCTTGCCGGCGTGATCGCCGACGAGGTCGACATCATCGTCAACTCAGCAGCA AACACCACTTTCGACGAGAGGTACGATGTTGCAATGGACATCAACACCGTAGGGCCATTC AGGATAATGAGCTTCGCGCAGCGGTTTCGGAGGCTGAAGCTGTTCTTGCAAGTGTCAACA GCATATGTGAACGGACAGAGGCAAGGTGTGGTGCTAGAGAAGCCATTTCGCTTGGGGGAC ACCATAGCCAAGGAGTTAGGATCTCCAGATTCTTCACAACACAAGAACACCATGCTTGAC ATCGAGGCAGAGATCAAGCTGGCTTTTGACCACAGGAGACACGGTGATGATTCAGCCTCT TTCTCTGAAGAAATGAAAGAGTTAGGATTAGAGAGGGCAAAACTCCATGGGTGGCAAGAT ACATATGTGTTCACCAAGGCCATGGGAGAGATGGTGATCAACTCCATGCGAGGAGATATA CCGGTTGTCACCATCAGGCCAAGCGTCATCGAGAGCACCTGGAGGGATCCCTTCCCCGGT TGGATGGAAGGGAACAGGATGATGGATCCTGTTGTGCTGTACTACGGCAAAGGCCAGCTG AGCGGGTTCCTCGCTGACCCGGAGGGTGTTCTTGACGTGGTTCCGGCGGACATGGTGGTG AACGCAACGCTGGCGTCCATGGCGAAGCACGGGCGCGGCGGCGCGGCGGCGGCGGCGGCG GCGGCGGAGGGGATGCACGTGTACCACGTGGCGTCGTCGACGGTGAACCCGCTGGCGTTC GGCGACCTGAGCCGGTTCCTCTTCCAGCACTTCACGGGGTCGCCGTACAGCGACGCGGCG GGGCGGCCCATCCACGTGCCGCCGATGCGGCTGTTCGACACCATGGAGCAGTTCGCCAGC TACGTCGAGACCGACGCGCTGCTGCGCGCCGGCCGCCTCGCCGGCGCCGGCGCCGGCGCC GGAGACGAGAGGGTGTCGCAGCGGCTGCGCGAGCTCTGCGCCAAGTCCGTCGAGCAGACC ATCTACCTCGGCAGCATCTACCAGCCCTACACCTTCTACGGCGGCAGGTTCGACAATGGG AACACGGAGGCGCTGATCGGGGAGATGTCGGAGGAGGAGAAGGCGCGGTTCCACTTCGAC GTGAGGAGCATCGAGTGGACGGACTACATCACCAACGTGCACATCCCGGGGCTCAGGAAG CACGTCATGAAGGGGAGGGGCGTCGGCGGCGGCAGCGGCGCGTCGTCGTCATCGAACGCC TCGCTGCTCGCCGGCGCCTCCGTTTGA

Peptide Sequence

PEP ID	Os03t0167600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3653709:3657069:1 gene:Os03g0167600 transcript:Os03t0167600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MALE STERILITY 2, male sterility protein 2, defective pollen wall description:Similar to Male sterility protein 2. (Os03t0167600-01)
Sequence	MGMSSCVNLSRVAAAAAGRRPGFAGELGGRRGHGRSVLPVVAALPVRRKGSGCGVACCVS SSSSSSVHGKNSAAAAEGHAGGIGIAEFLGGKNFLITGGTGFLAKVLIEKILRTNPDVGK IYVLIKAKDGDAALKRLHNEVVDTELFSRLQEIHGKDYHSFAARKLVPVVGDVREANVGI APELAGVIADEVDIIVNSAANTTFDERYDVAMDINTVGPFRIMSFAQRFRRLKLFLQVST AYVNGQRQGVVLEKPFRLGDTIAKELGSPDSSQHKNTMLDIEAEIKLAFDHRRHGDDSAS FSEEMKELGLERAKLHGWQDTYVFTKAMGEMVINSMRGDIPVVTIRPSVIESTWRDPFPG WMEGNRMMDPVVLYYGKGQLSGFLADPEGVLDVVPADMVVNATLASMAKHGRGGAAAAAA AAEGMHVYHVASSTVNPLAFGDLSRFLFQHFTGSPYSDAAGRPIHVPPMRLFDTMEQFAS YVETDALLRAGRLAGAGAGAGDERVSQRLRELCAKSVEQTIYLGSIYQPYTFYGGRFDNG NTEALIGEMSEEEKARFHFDVRSIEWTDYITNVHIPGLRKHVMKGRGVGGGSGASSSSNA SLLAGASV

Transcript Sequence

Transcript ID	Os03t0167600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3653709:3657069:1 gene:Os03g0167600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MALE STERILITY 2, male sterility protein 2, defective pollen wall description:Similar to Male sterility protein 2. (Os03t0167600-01)
Sequence	GATGGCCTCCTCCTGCAATCTGCAAGACTGAAGCTAAGCAGCTTTAAATCCTCCTGCGTC ATTTAACCCCCTCTCTGCCTCTCTGAGCTCTGAGCTGCTCAGCTACAGCTCCCTAGCTGT TCTGTTCGATTAATTCAGCTTCGCTTTGCTTGGATTAATTTGTAGGTGACTAACTCGATC ACAGCTCAGGTGATTGGCAGTTTGATCACAAGGCAGGAAGGAAGTAGAAGTAGATTGCTG TAGCACACGCTCACCTACCAAGCTTCTACACTCGCAGCCAAGCTTTGATCGTTTGCTTGC TTTGCATTGCTTGGGCTTTGTGGGCAAGAACGTGTCTATCTTCTTCTTGTTCGTCTCGTC AGGCGGCCATGGGGATGAGTTCATGCGTGAACCTATCCCGTGTCGCCGCCGCCGCCGCAG GGAGACGGCCGGGATTTGCCGGTGAGCTGGGAGGTCGCCGTGGTCATGGCAGAAGCGTGC TTCCGGTTGTTGCTGCACTGCCGGTGAGGAGGAAGGGAAGCGGTTGTGGCGTGGCGTGCT GCGTCTCCTCCTCGTCTTCCTCCTCCGTGCACGGCAAGAACTCGGCGGCGGCGGCGGAGG GTCACGCCGGCGGCATTGGGATCGCGGAGTTCCTCGGCGGCAAGAACTTCCTCATCACCG GCGGAACCGGGTTCCTGGCAAAAGTTCTCATCGAGAAGATATTGCGGACGAATCCCGACG TTGGCAAGATCTACGTGCTGATCAAGGCGAAGGACGGTGACGCAGCACTGAAAAGATTGC ACAACGAGGTTGTGGACACAGAATTGTTCAGTCGTTTGCAGGAAATCCATGGCAAGGATT ACCACAGCTTCGCGGCAAGAAAGCTGGTGCCTGTAGTCGGAGATGTCAGAGAAGCCAACG TTGGCATCGCCCCTGAGCTTGCCGGCGTGATCGCCGACGAGGTCGACATCATCGTCAACT CAGCAGCAAACACCACTTTCGACGAGAGGTACGATGTTGCAATGGACATCAACACCGTAG GGCCATTCAGGATAATGAGCTTCGCGCAGCGGTTTCGGAGGCTGAAGCTGTTCTTGCAAG TGTCAACAGCATATGTGAACGGACAGAGGCAAGGTGTGGTGCTAGAGAAGCCATTTCGCT TGGGGGACACCATAGCCAAGGAGTTAGGATCTCCAGATTCTTCACAACACAAGAACACCA TGCTTGACATCGAGGCAGAGATCAAGCTGGCTTTTGACCACAGGAGACACGGTGATGATT CAGCCTCTTTCTCTGAAGAAATGAAAGAGTTAGGATTAGAGAGGGCAAAACTCCATGGGT GGCAAGATACATATGTGTTCACCAAGGCCATGGGAGAGATGGTGATCAACTCCATGCGAG GAGATATACCGGTTGTCACCATCAGGCCAAGCGTCATCGAGAGCACCTGGAGGGATCCCT TCCCCGGTTGGATGGAAGGGAACAGGATGATGGATCCTGTTGTGCTGTACTACGGCAAAG GCCAGCTGAGCGGGTTCCTCGCTGACCCGGAGGGTGTTCTTGACGTGGTTCCGGCGGACA TGGTGGTGAACGCAACGCTGGCGTCCATGGCGAAGCACGGGCGCGGCGGCGCGGCGGCGG CGGCGGCGGCGGCGGAGGGGATGCACGTGTACCACGTGGCGTCGTCGACGGTGAACCCGC TGGCGTTCGGCGACCTGAGCCGGTTCCTCTTCCAGCACTTCACGGGGTCGCCGTACAGCG ACGCGGCGGGGCGGCCCATCCACGTGCCGCCGATGCGGCTGTTCGACACCATGGAGCAGT TCGCCAGCTACGTCGAGACCGACGCGCTGCTGCGCGCCGGCCGCCTCGCCGGCGCCGGCG CCGGCGCCGGAGACGAGAGGGTGTCGCAGCGGCTGCGCGAGCTCTGCGCCAAGTCCGTCG AGCAGACCATCTACCTCGGCAGCATCTACCAGCCCTACACCTTCTACGGCGGCAGGTTCG ACAATGGGAACACGGAGGCGCTGATCGGGGAGATGTCGGAGGAGGAGAAGGCGCGGTTCC ACTTCGACGTGAGGAGCATCGAGTGGACGGACTACATCACCAACGTGCACATCCCGGGGC TCAGGAAGCACGTCATGAAGGGGAGGGGCGTCGGCGGCGGCAGCGGCGCGTCGTCGTCAT CGAACGCCTCGCTGCTCGCCGGCGCCTCCGTTTGAATGGCCAGGCCGGCGCCGGAGAAGA GGAGGATGCATGCGCGGCGTGTACACTAGGCTAGATTGTTGTTAACTTGTTCTGCCGTGG CAGTCTGACAGATGATCTTTGTGCTGCAGTAATTAAGGTTGATAGTATGTTATCTCT