Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0165400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3525115:3531350:-1 gene:Os03g0165400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 1 description:Similar to Relative to SR12 protein (Fragment). (Os03t0165400-01);Similar to Beta-galactosidase. (Os03t0165400-02)
Sequence	ATGGGGAGGGGGTGCCTGGCTGCGCTGCTCGGCGGCGCGGTGGCGGTGGCCGTGCTGGTC GCCGTCGTCCACTGCGCGGTGACGTACGACAAGAAGGCGGTGCTCGTCGACGGCCAGAGG AGGATTCTCTTCTCCGGATCCATACATTACCCGAGGAGCACACCCGAAATGTGGGACGGG CTAATTGAGAAGGCTAAAGATGGAGGCTTGGATGTGATCCAGACCTATGTCTTTTGGAAT GGGCATGAACCAACTCCTGGAAATTACAATTTTGAAGGGAGGTACGATCTGGTCAGGTTC ATCAAGACTGTCCAGAAGGCTGGCATGTTTGTTCATCTCCGCATCGGTCCCTACATTTGT GGAGAGTGGAATTTTGGTGGATTTCCAGTTTGGTTGAAGTATGTACCAGGCATCAGCTTC AGGACGGACAATGAACCTTTCAAGAATGCAATGCAGGGGTTCACAGAGAAAATTGTGGGC ATGATGAAGAGTGAAAACCTCTTTGCTTCACAAGGCGGTCCTATTATCCTCTCTCAGATT GAGAACGAGTATGGGCCAGAAGGTAAAGAGTTTGGGGCTGCCGGCAAGGCATATATCAAC TGGGCGGCAAAGATGGCCGTGGGATTGGACACCGGTGTGCCGTGGGTGATGTGCAAGGAG GATGACGCACCTGACCCAGTGATCAATGCATGCAATGGTTTCTATTGTGACACATTTTCT CCTAACAAGCCTTACAAGCCTACGATGTGGACTGAAGCTTGGAGTGGATGGTTTACTGAA TTCGGAGGAACCATCCGTCAACGACCAGTTGAAGATCTCGCATTTGGTGTTGCTCGCTTC GTACAGAAGGGTGGTTCTTTTATCAACTACTACATGTATCATGGAGGAACGAATTTTGGT CGCACGGCTGGAGGTCCCTTTATCACCACGAGCTATGATTATGATGCTCCACTTGATGAA TATGGACTTGCAAGGGAACCAAAGTTTGGGCACCTTAAAGAACTCCATAGAGCTGTTAAG TTATGTGAGCAGCCTTTGGTTTCTGCCGATCCAACTGTGACTACCCTTGGAAGTATGCAA GAGGCCCATGTGTTCCGATCTTCCTCTGGCTGTGCAGCTTTCCTTGCAAACTACAATTCT AACTCGTATGCCAAAGTTATCTTCAACAATGAAAATTACAGCCTTCCACCTTGGTCAATC AGCATCCTTCCTGATTGCAAAAATGTTGTTTTTAACACTGCAACAGTTGGTGTTCAGACA AATCAAATGCAAATGTGGGCAGACGGGGCTTCTTCAATGATGTGGGAGAAGTATGATGAG GAGGTTGATTCATTGGCAGCTGCTCCATTGCTCACGTCAACTGGTCTACTTGAGCAGCTT AATGTCACAAGAGACACCAGTGATTACCTCTGGTACATTACGAGTGTGGAGGTAGACCCA TCTGAGAAGTTTCTACAAGGTGGCACGCCTCTGTCACTCACTGTGCAGTCTGCTGGCCAT GCGCTGCATGTCTTCATCAATGGGCAACTCCAAGGTTCTGCCTATGGAACCAGGGAAGAT CGGAAAATCTCATATAGTGGCAATGCTAACCTTCGTGCTGGTACAAACAAAGTTGCACTG TTGAGTGTTGCTTGTGGACTGCCGAATGTCGGAGTGCATTATGAGACGTGGAACACTGGT GTTGTTGGTCCTGTTGTGATTCACGGGTTGGACGAAGGTTCAAGAGATCTGACTTGGCAG ACTTGGTCCTATCAGGTTGGCCTGAAAGGTGAACAGATGAATCTAAACTCCTTAGAAGGC TCAGGCTCAGTTGAATGGATGCAAGGATCATTGGTAGCACAAAACCAACAACCGTTGGCA TGGTATAGGGCATACTTTGATACTCCCAGTGGTGACGAGCCACTGGCTCTGGATATGGGC AGCATGGGTAAGGGTCAAATATGGATAAATGGGCAAAGCATTGGACGGTACTGGACAGCA TATGCGGAAGGTGACTGCAAAGGTTGCCATTACACTGGGTCATACAGGGCACCCAAGTGT CAGGCAGGTTGTGGTCAGCCTACACAGCGCTGGTATCATGTGCCAAGATCCTGGTTGCAA CCAACTAGAAATCTGCTAGTGGTTTTTGAGGAACTTGGCGGTGATTCTTCAAAGATTGCC CTTGCGAAGCGGACAGTCTCAGGTGTCTGTGCTGATGTATCTGAATATCATCCAAATATC AAGAACTGGCAGATCGAGAGCTATGGGGAACCAGAGTTCCACACGGCAAAGGTGCATTTA AAATGTGCACCTGGGCAGACCATTTCTGCAATCAAATTTGCTAGCTTTGGGACACCTCTT GGAACTTGCGGAACATTCCAGCAAGGGGAGTGCCATTCAATTAACTCAAACTCTGTTCTT GAAAAGAAATGCATTGGACTACAAAGATGTGTCGTCGCAATCTCTCCCAGCAACTTTGGT GGAGATCCCTGCCCGGAGGTGATGAAAAGGGTGGCGGTTGAGGCGGTATGCTCTACCGCT GCATAG

Peptide Sequence

PEP ID	Os03t0165400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3525115:3531350:-1 gene:Os03g0165400 transcript:Os03t0165400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 1 description:Similar to Relative to SR12 protein (Fragment). (Os03t0165400-01);Similar to Beta-galactosidase. (Os03t0165400-02)
Sequence	MGRGCLAALLGGAVAVAVLVAVVHCAVTYDKKAVLVDGQRRILFSGSIHYPRSTPEMWDG LIEKAKDGGLDVIQTYVFWNGHEPTPGNYNFEGRYDLVRFIKTVQKAGMFVHLRIGPYIC GEWNFGGFPVWLKYVPGISFRTDNEPFKNAMQGFTEKIVGMMKSENLFASQGGPIILSQI ENEYGPEGKEFGAAGKAYINWAAKMAVGLDTGVPWVMCKEDDAPDPVINACNGFYCDTFS PNKPYKPTMWTEAWSGWFTEFGGTIRQRPVEDLAFGVARFVQKGGSFINYYMYHGGTNFG RTAGGPFITTSYDYDAPLDEYGLAREPKFGHLKELHRAVKLCEQPLVSADPTVTTLGSMQ EAHVFRSSSGCAAFLANYNSNSYAKVIFNNENYSLPPWSISILPDCKNVVFNTATVGVQT NQMQMWADGASSMMWEKYDEEVDSLAAAPLLTSTGLLEQLNVTRDTSDYLWYITSVEVDP SEKFLQGGTPLSLTVQSAGHALHVFINGQLQGSAYGTREDRKISYSGNANLRAGTNKVAL LSVACGLPNVGVHYETWNTGVVGPVVIHGLDEGSRDLTWQTWSYQVGLKGEQMNLNSLEG SGSVEWMQGSLVAQNQQPLAWYRAYFDTPSGDEPLALDMGSMGKGQIWINGQSIGRYWTA YAEGDCKGCHYTGSYRAPKCQAGCGQPTQRWYHVPRSWLQPTRNLLVVFEELGGDSSKIA LAKRTVSGVCADVSEYHPNIKNWQIESYGEPEFHTAKVHLKCAPGQTISAIKFASFGTPL GTCGTFQQGECHSINSNSVLEKKCIGLQRCVVAISPSNFGGDPCPEVMKRVAVEAVCSTA A

Transcript Sequence

Transcript ID	Os03t0165400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3525115:3531350:-1 gene:Os03g0165400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 1 description:Similar to Relative to SR12 protein (Fragment). (Os03t0165400-01);Similar to Beta-galactosidase. (Os03t0165400-02)
Sequence	ACGGGGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGGCCATTATAAT AGAGCCATAGGCCAAAAGCTCAACTGCACTGAGAGCAGCATCAGCAGCAGTTCACTGTCA CTCTTCCCAAGAACGGGTGCCAAGGAATCCTAGAATCCAAGAAAGGCAGCAGCTGCTGCA GCAAGAACAGCACAGGGGGAGAGGTGGTGGTGGTGGTGGTGGGGAAGAAGACCACACACA TTCGGCTGGGTGGTGGTCTTCTTCTTCTGCTGCTGCTGCCGCTGTTGCCGCTTGTTGGAG TGAGGAGAGTGGGTGAGTGATGGGGAGGGGGTGCCTGGCTGCGCTGCTCGGCGGCGCGGT GGCGGTGGCCGTGCTGGTCGCCGTCGTCCACTGCGCGGTGACGTACGACAAGAAGGCGGT GCTCGTCGACGGCCAGAGGAGGATTCTCTTCTCCGGATCCATACATTACCCGAGGAGCAC ACCCGAAATGTGGGACGGGCTAATTGAGAAGGCTAAAGATGGAGGCTTGGATGTGATCCA GACCTATGTCTTTTGGAATGGGCATGAACCAACTCCTGGAAATTACAATTTTGAAGGGAG GTACGATCTGGTCAGGTTCATCAAGACTGTCCAGAAGGCTGGCATGTTTGTTCATCTCCG CATCGGTCCCTACATTTGTGGAGAGTGGAATTTTGGTGGATTTCCAGTTTGGTTGAAGTA TGTACCAGGCATCAGCTTCAGGACGGACAATGAACCTTTCAAGAATGCAATGCAGGGGTT CACAGAGAAAATTGTGGGCATGATGAAGAGTGAAAACCTCTTTGCTTCACAAGGCGGTCC TATTATCCTCTCTCAGATTGAGAACGAGTATGGGCCAGAAGGTAAAGAGTTTGGGGCTGC CGGCAAGGCATATATCAACTGGGCGGCAAAGATGGCCGTGGGATTGGACACCGGTGTGCC GTGGGTGATGTGCAAGGAGGATGACGCACCTGACCCAGTGATCAATGCATGCAATGGTTT CTATTGTGACACATTTTCTCCTAACAAGCCTTACAAGCCTACGATGTGGACTGAAGCTTG GAGTGGATGGTTTACTGAATTCGGAGGAACCATCCGTCAACGACCAGTTGAAGATCTCGC ATTTGGTGTTGCTCGCTTCGTACAGAAGGGTGGTTCTTTTATCAACTACTACATGTATCA TGGAGGAACGAATTTTGGTCGCACGGCTGGAGGTCCCTTTATCACCACGAGCTATGATTA TGATGCTCCACTTGATGAATATGGACTTGCAAGGGAACCAAAGTTTGGGCACCTTAAAGA ACTCCATAGAGCTGTTAAGTTATGTGAGCAGCCTTTGGTTTCTGCCGATCCAACTGTGAC TACCCTTGGAAGTATGCAAGAGGCCCATGTGTTCCGATCTTCCTCTGGCTGTGCAGCTTT CCTTGCAAACTACAATTCTAACTCGTATGCCAAAGTTATCTTCAACAATGAAAATTACAG CCTTCCACCTTGGTCAATCAGCATCCTTCCTGATTGCAAAAATGTTGTTTTTAACACTGC AACAGTTGGTGTTCAGACAAATCAAATGCAAATGTGGGCAGACGGGGCTTCTTCAATGAT GTGGGAGAAGTATGATGAGGAGGTTGATTCATTGGCAGCTGCTCCATTGCTCACGTCAAC TGGTCTACTTGAGCAGCTTAATGTCACAAGAGACACCAGTGATTACCTCTGGTACATTAC GAGTGTGGAGGTAGACCCATCTGAGAAGTTTCTACAAGGTGGCACGCCTCTGTCACTCAC TGTGCAGTCTGCTGGCCATGCGCTGCATGTCTTCATCAATGGGCAACTCCAAGGTTCTGC CTATGGAACCAGGGAAGATCGGAAAATCTCATATAGTGGCAATGCTAACCTTCGTGCTGG TACAAACAAAGTTGCACTGTTGAGTGTTGCTTGTGGACTGCCGAATGTCGGAGTGCATTA TGAGACGTGGAACACTGGTGTTGTTGGTCCTGTTGTGATTCACGGGTTGGACGAAGGTTC AAGAGATCTGACTTGGCAGACTTGGTCCTATCAGGTTGGCCTGAAAGGTGAACAGATGAA TCTAAACTCCTTAGAAGGCTCAGGCTCAGTTGAATGGATGCAAGGATCATTGGTAGCACA AAACCAACAACCGTTGGCATGGTATAGGGCATACTTTGATACTCCCAGTGGTGACGAGCC ACTGGCTCTGGATATGGGCAGCATGGGTAAGGGTCAAATATGGATAAATGGGCAAAGCAT TGGACGGTACTGGACAGCATATGCGGAAGGTGACTGCAAAGGTTGCCATTACACTGGGTC ATACAGGGCACCCAAGTGTCAGGCAGGTTGTGGTCAGCCTACACAGCGCTGGTATCATGT GCCAAGATCCTGGTTGCAACCAACTAGAAATCTGCTAGTGGTTTTTGAGGAACTTGGCGG TGATTCTTCAAAGATTGCCCTTGCGAAGCGGACAGTCTCAGGTGTCTGTGCTGATGTATC TGAATATCATCCAAATATCAAGAACTGGCAGATCGAGAGCTATGGGGAACCAGAGTTCCA CACGGCAAAGGTGCATTTAAAATGTGCACCTGGGCAGACCATTTCTGCAATCAAATTTGC TAGCTTTGGGACACCTCTTGGAACTTGCGGAACATTCCAGCAAGGGGAGTGCCATTCAAT TAACTCAAACTCTGTTCTTGAAAAGAAATGCATTGGACTACAAAGATGTGTCGTCGCAAT CTCTCCCAGCAACTTTGGTGGAGATCCCTGCCCGGAGGTGATGAAAAGGGTGGCGGTTGA GGCGGTATGCTCTACCGCTGCATAGGGCAATTTCTTTGCCGAGACGAATTTAGAGATGGC ACCAAACAGGTGGGCTTGTGCTTGATCAAAGCACACAGAAAGCGATGCAGAGTAGAGTTC AACTGTAAAGTATCGACGCCACATAGCTGTGGCTGGAGGATTAGAGATCGATTCTAGCAT TCACTCAGTCGAATTTCAGATTAGAGGATTCTAACTCTACTGCATCTCCATGAATTGTTC AGAGTGACCAACTGCTAATTGAAGTTGGTCCTGGGATGGAGTGCAGGGAGAGTAAAGGCA AAAGATTGGTGCATTCTTTTGCTCGCGTTAGTGTGCGTGTTGTGTTGTTTCATCTTTCTT GAAAGGAAGAAAGATGCCGATGAATTGTGCATGTATCCCATATGAGGAATCGTTGATTGT GCAGTGAGCATGATATGCTGCAGAACAATTGCTCGTGTCATATTCTGAAGTTCAGAAAAG AGGTTGTC