Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0165100-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:3501294:3504478:-1 gene:Os03g0165100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0165100-00)
Sequence	ATGGCGATTCCCCGTCGCCTCGCCGCCGCCGCGGCCGCCGAAACCACCAAACGCTCGGCG GCAGGTCTCGCCGCCGCCCTCGGTGGAAGCGGAGGGAAGCCCGCAACAGCCGACCTGGCC GCTGCCGCGACGGCCGCGGCGGCCGCCGGTCGCGCCTCCGAATGCCAGTCCCTCCTCCTC CGCATGTCGCGCCGCCGCGGCGCCTGCCGTCGCGAGATCGTCTCCTCCCTCCTCGGCTCC TCCCCCACCCCGCAGCCGCGGGTGTTTGACCTCCTAATCCGCACCTACACCCAGTCCCGC AAGCCCCGCGAGGCCTTCGAGGCATTCCGCCTCATCCTCGACCACCGCGTCCCCATCCCC GCCGCCGCCTCCAACGCCCTGCTCGCCGCCCTCTCCCGCGCCGGATGGCCCCATCTCGCC GCGGACGCCTACCGCCTTGTCTTCTCCTCCAACTCCGAGGTAAACACGTACACGCTTAAC ATAATGGTCCACAACTACTGCAAAGCCCTGGAGTTCGACAAGGTTGACGCTGTCATCTCC GAGATGGAGAAGAGATGTGTCTTTCCTGATGTGGTTACACATAATGTGATGGTTGATGCT AGATTTCGCGCTGGGGACGCGGAGGCAGCAATGGCGTTGGTTGACTCAATGGTTAGTAAA GGGCTAAAGCCTGGGATTGTGACGTATAATTCGGTTCTGAAAGGGTTATGTAGGAGTGGG ATGTGGGATAAAGCATGGGAAGTGTTCAAAGAAATGGATGATTTTGGTGTTGCGCCTGAT GTTCGGAGTTTTACCATTTTGATTGGGGGATTTTGTAGAGTTGGGGAGATTGAGGAGGCG TTGAAGATTTACAAGGAGATGCGGCACCGTGGTATTAAACCAGATTTGGTGAGCTTTAGT TGCTTAATTGGATTGTTTGCAAGGAGGGGGAAGATGGACCATGCGATGGCGTACTTGAGG GAGATGAGGTGCTTTGGATTGGTACCCGATGGTGTGATTTACACAATGGTAATAGGCGGA TTTTGTAGGGCTGGGTTAATGTCAGATGCTCTGAGAGTTAGGGATGAGATGGTTGGCTGT GGATGTTTGCCAGATGTGGTAACTTACAATACTTTGTTGAATGGGCTCTGTAAAGAGCGC AGGTTGTTAGATGCAGAAGGGCTTTTGAATGAGATGAGGGAGAGAGGGGTTCCACCAGAT TTATGTACCTTCACAACTTTGATTCACGGGTATTGCATAGAGGGTAAACTAGACAAGGCG CTGCAACTGTTTGACACAATGTTGAACCAGCGTTTGAGGCCAGACATAGTAACATATAAT ACTTTGATCGACGGAATGTGCAGACAAGGTGATCTTGACAAAGCCAATGATCTATGGGAT GATATGCATTCTCGTGAAATCTTCCCCAATCATGTTACGTACAGTATCCTAATCGACAGT CACTGTGAGAAGGGACAAGTGGAAGATGCATTTGGTTTTTTGGATGAAATGATAAATAAG GGCATTTTGCCAAACATCATGACATATAATTCCATCATTAAGGGCTATTGCCGGTCTGGA AATGTTTCAAAGGGGCAGAAGTTCTTGCAAAAGATGATGGTCAACAAGGTGTCACCTGAT TTAATTACTTACAACACCCTAATCCATGGTTATATCAAAGAAGATAAGATGCACGATGCT TTTAAGTTGCTTAACATGATGGAGAAGGAAAAGGTTCAACCAGATGTTGTCACATATAAT ATGCTCATAAATGGGTTTTCTGTACATGGTAATGTGCAAGAAGCTGGTTGGATTTTTGAG AAAATGTGTGCTAAAGGAATTGAACCAGATAGATATACATACATGTCTATGATAAATGGT CATGTCACAGCTGGCAACTCGAAGGAGGCATTCCAGCTTCATGATGAGATGCTTCAAAGA GGGAAAGAGAAACGCAGGGCTGCAGGCACTGTGCAGTTTGTGAATATTCAGAATTCTGCT GAAAGTCTGAAACAAATGCCTATGGATTTGAAGGTAACATGTTCCATATACTTCTTCGCC AAGACCCAGGAATTTGCTATCCGGGGTTGTGCTTTTGTTTTCGGGGCACTGGAGAAATCA AGTACACCTTTAAATTTTCAGTCATGCCATGATACAGACAGACGAGTACTGCTTGCTAAG GAGTCACAATCAACAGAACGTGATTGA

Peptide Sequence

PEP ID	Os03t0165100-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:3501294:3504478:-1 gene:Os03g0165100 transcript:Os03t0165100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0165100-00)
Sequence	MAIPRRLAAAAAAETTKRSAAGLAAALGGSGGKPATADLAAAATAAAAAGRASECQSLLL RMSRRRGACRREIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIP AAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVIS EMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSG MWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFS CLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQNSA ESLKQMPMDLKVTCSIYFFAKTQEFAIRGCAFVFGALEKSSTPLNFQSCHDTDRRVLLAK ESQSTERD

Transcript Sequence

Transcript ID	Os03t0165100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3501294:3504478:-1 gene:Os03g0165100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0165100-00)
Sequence	ATGGCGATTCCCCGTCGCCTCGCCGCCGCCGCGGCCGCCGAAACCACCAAACGCTCGGCG GCAGGTCTCGCCGCCGCCCTCGGTGGAAGCGGAGGGAAGCCCGCAACAGCCGACCTGGCC GCTGCCGCGACGGCCGCGGCGGCCGCCGGTCGCGCCTCCGAATGCCAGTCCCTCCTCCTC CGCATGTCGCGCCGCCGCGGCGCCTGCCGTCGCGAGATCGTCTCCTCCCTCCTCGGCTCC TCCCCCACCCCGCAGCCGCGGGTGTTTGACCTCCTAATCCGCACCTACACCCAGTCCCGC AAGCCCCGCGAGGCCTTCGAGGCATTCCGCCTCATCCTCGACCACCGCGTCCCCATCCCC GCCGCCGCCTCCAACGCCCTGCTCGCCGCCCTCTCCCGCGCCGGATGGCCCCATCTCGCC GCGGACGCCTACCGCCTTGTCTTCTCCTCCAACTCCGAGGTAAACACGTACACGCTTAAC ATAATGGTCCACAACTACTGCAAAGCCCTGGAGTTCGACAAGGTTGACGCTGTCATCTCC GAGATGGAGAAGAGATGTGTCTTTCCTGATGTGGTTACACATAATGTGATGGTTGATGCT AGATTTCGCGCTGGGGACGCGGAGGCAGCAATGGCGTTGGTTGACTCAATGGTTAGTAAA GGGCTAAAGCCTGGGATTGTGACGTATAATTCGGTTCTGAAAGGGTTATGTAGGAGTGGG ATGTGGGATAAAGCATGGGAAGTGTTCAAAGAAATGGATGATTTTGGTGTTGCGCCTGAT GTTCGGAGTTTTACCATTTTGATTGGGGGATTTTGTAGAGTTGGGGAGATTGAGGAGGCG TTGAAGATTTACAAGGAGATGCGGCACCGTGGTATTAAACCAGATTTGGTGAGCTTTAGT TGCTTAATTGGATTGTTTGCAAGGAGGGGGAAGATGGACCATGCGATGGCGTACTTGAGG GAGATGAGGTGCTTTGGATTGGTACCCGATGGTGTGATTTACACAATGGTAATAGGCGGA TTTTGTAGGGCTGGGTTAATGTCAGATGCTCTGAGAGTTAGGGATGAGATGGTTGGCTGT GGATGTTTGCCAGATGTGGTAACTTACAATACTTTGTTGAATGGGCTCTGTAAAGAGCGC AGGTTGTTAGATGCAGAAGGGCTTTTGAATGAGATGAGGGAGAGAGGGGTTCCACCAGAT TTATGTACCTTCACAACTTTGATTCACGGGTATTGCATAGAGGGTAAACTAGACAAGGCG CTGCAACTGTTTGACACAATGTTGAACCAGCGTTTGAGGCCAGACATAGTAACATATAAT ACTTTGATCGACGGAATGTGCAGACAAGGTGATCTTGACAAAGCCAATGATCTATGGGAT GATATGCATTCTCGTGAAATCTTCCCCAATCATGTTACGTACAGTATCCTAATCGACAGT CACTGTGAGAAGGGACAAGTGGAAGATGCATTTGGTTTTTTGGATGAAATGATAAATAAG GGCATTTTGCCAAACATCATGACATATAATTCCATCATTAAGGGCTATTGCCGGTCTGGA AATGTTTCAAAGGGGCAGAAGTTCTTGCAAAAGATGATGGTCAACAAGGTGTCACCTGAT TTAATTACTTACAACACCCTAATCCATGGTTATATCAAAGAAGATAAGATGCACGATGCT TTTAAGTTGCTTAACATGATGGAGAAGGAAAAGGTTCAACCAGATGTTGTCACATATAAT ATGCTCATAAATGGGTTTTCTGTACATGGTAATGTGCAAGAAGCTGGTTGGATTTTTGAG AAAATGTGTGCTAAAGGAATTGAACCAGATAGATATACATACATGTCTATGATAAATGGT CATGTCACAGCTGGCAACTCGAAGGAGGCATTCCAGCTTCATGATGAGATGCTTCAAAGA GGGAAAGAGAAACGCAGGGCTGCAGGCACTGTGCAGTTTGTGAATATTCAGAATTCTGCT GAAAGTCTGAAACAAATGCCTATGGATTTGAAGGTAACATGTTCCATATACTTCTTCGCC AAGACCCAGGAATTTGCTATCCGGGGTTGTGCTTTTGTTTTCGGGGCACTGGAGAAATCA AGTACACCTTTAAATTTTCAGTCATGCCATGATACAGACAGACGAGTACTGCTTGCTAAG GAGTCACAATCAACAGAACGTGATTGA