Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0162500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:3380200:3381695:1 gene:Os03g0162500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os03t0162500-01)
Sequence

ATGAGGGCGGCGGCGGCGGCGGCGGGGCAGATCGATCCGTCCCCTGGGGCGCCGGCGAAG
TCGCGGCTGAAGAGGCTGTTCGAGAGGCAGCTGCTGCGGGTGTCGCCGGCGGAGAGGCTC
CCGTCGGTCGCGGGTGTCGGGGAGAAGGATGAGTCGTCGGAGCCGAGCTCCGTGTGCCTG
GACGGCATGGTGCGGAGCTTCTTGGAGGACGGCGTCGGCGTCGAGCGGCCGGCGGGCGCC
GCGCGCTGCTGCAATTGCTTCCACGGCGGGGAGGCGTCTGACGACGACGACGACGGCCCC
GCTGCTGCCGAGGCGGCGGCCACCTCCGACGCCGCAGAGACCATCAAGGGCCTCGTCCAC
TGCGCCAGCCTCCGGGAACGCAACCTCCTCGCCGACGTCTCCACGCTCGTCGAGCGCCAC
CGCGCCGCGGGGGCGCGCAAGCGCGACCTCCTCCGCCTCCTCGCCGACTCGCTCCGCGCG
GCGGGGCACGACGCCGCGGTCTGCATCTCCCGCTGGGACAAGTCCTCCTCCCACCCAAAA
GGCGAGCACGCCTACCTCGACGTCCTCCTCCCTCCCGCCTCCGACCGCGCCGAGCGCGAG
CGCATCCTCGTCGACGTCGACTTCCGGTCGGAGTTCGAGGTCGCGCGGCCCACCAAGGCG
TACCGCGCCGTGCTCCAGCGCCTGCCGTCGGTGTTCGTCGGGAAGGAGGACCGCCTCCGC
CTCCTCGTGGCCGCGGCCGCCGACGCCGCGCGCGCCAGCCTCAAGAAGCGCGGCCTCCAC
CTCCCGCCATGGCGCAAGCCCGAGTACATGCGCGCCAAGTGGCTTTCACCCTACGAGCGC
GACGTTCCTTCACCGCAGCAGCCAGATGCCTCCGCCGGTGAGCTCGCCGTCGACGGCGAG
GGAGGTGGAGCGTGGACTCAATGA

Peptide Sequence

PEP ID

Os03t0162500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:3380200:3381695:1 gene:Os03g0162500 transcript:Os03t0162500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os03t0162500-01)
Sequence

MRAAAAAAGQIDPSPGAPAKSRLKRLFERQLLRVSPAERLPSVAGVGEKDESSEPSSVCL
DGMVRSFLEDGVGVERPAGAARCCNCFHGGEASDDDDDGPAAAEAAATSDAAETIKGLVH
CASLRERNLLADVSTLVERHRAAGARKRDLLRLLADSLRAAGHDAAVCISRWDKSSSHPK
GEHAYLDVLLPPASDRAERERILVDVDFRSEFEVARPTKAYRAVLQRLPSVFVGKEDRLR
LLVAAAADAARASLKKRGLHLPPWRKPEYMRAKWLSPYERDVPSPQQPDASAGELAVDGE
GGGAWTQ

Transcript Sequence

Transcript ID

Os03t0162500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3380200:3381695:1 gene:Os03g0162500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os03t0162500-01)
Sequence

AAAAAAAGGAGAAGAAAAGAAAAGGAAAAAAAGAAAAGAAAAACAAACCCTAGCCGCACC
GATCGAAGCCAGTGAGACGCCGCCGACGGCTATGCGTGAGGCGATCGTCGGTGACCACGA
TCGCCGCCGCCGCCGCACCCGCATCCAGTGAAACCCTGCACTGTCGTCTCGTTCGGTTGT
GAGGAGATGAGGGCGGCGGCGGCGGCGGCGGGGCAGATCGATCCGTCCCCTGGGGCGCCG
GCGAAGTCGCGGCTGAAGAGGCTGTTCGAGAGGCAGCTGCTGCGGGTGTCGCCGGCGGAG
AGGCTCCCGTCGGTCGCGGGTGTCGGGGAGAAGGATGAGTCGTCGGAGCCGAGCTCCGTG
TGCCTGGACGGCATGGTGCGGAGCTTCTTGGAGGACGGCGTCGGCGTCGAGCGGCCGGCG
GGCGCCGCGCGCTGCTGCAATTGCTTCCACGGCGGGGAGGCGTCTGACGACGACGACGAC
GGCCCCGCTGCTGCCGAGGCGGCGGCCACCTCCGACGCCGCAGAGACCATCAAGGGCCTC
GTCCACTGCGCCAGCCTCCGGGAACGCAACCTCCTCGCCGACGTCTCCACGCTCGTCGAG
CGCCACCGCGCCGCGGGGGCGCGCAAGCGCGACCTCCTCCGCCTCCTCGCCGACTCGCTC
CGCGCGGCGGGGCACGACGCCGCGGTCTGCATCTCCCGCTGGGACAAGTCCTCCTCCCAC
CCAAAAGGCGAGCACGCCTACCTCGACGTCCTCCTCCCTCCCGCCTCCGACCGCGCCGAG
CGCGAGCGCATCCTCGTCGACGTCGACTTCCGGTCGGAGTTCGAGGTCGCGCGGCCCACC
AAGGCGTACCGCGCCGTGCTCCAGCGCCTGCCGTCGGTGTTCGTCGGGAAGGAGGACCGC
CTCCGCCTCCTCGTGGCCGCGGCCGCCGACGCCGCGCGCGCCAGCCTCAAGAAGCGCGGC
CTCCACCTCCCGCCATGGCGCAAGCCCGAGTACATGCGCGCCAAGTGGCTTTCACCCTAC
GAGCGCGACGTTCCTTCACCGCAGCAGCCAGATGCCTCCGCCGGTGAGCTCGCCGTCGAC
GGCGAGGGAGGTGGAGCGTGGACTCAATGATTGATGATCAAGGACTCGTCTTTTGTTGAT
TCTTTTTTCTTCGGGAATTTGCATTTGCAGCGTCATCTTGGGCTGGATGCAAATGTTTTA
TTCTTTCTTTTCCTTTCCTTTTTCCCCCTTCATTTTTACCCTTTAATGGGTTTCATTTTG
GCCATGGAGTAGTAGTAACTGTAGTAGTAAGCACGGATAAGACGAACGGGAACAAAAAAA
ATGTAGTGTTAGTTGAACAGAAAAAAAAGAGAGATAATGGATTACGGCAATATCTACTTC
TTTC