Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0160400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3215854:3220186:-1 gene:Os03g0160400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ACL098Cp. (Os03t0160400-01)
Sequence	ATGGGCACTTATGTTAGGAACTATTCAGATGATGAATTCTCTGTGGCTGGCGAGAAGCCA GATGTAGAGTTCATGGACTATCAGAATGATGGCTCTATTCAAGATTATTCACTCGAAGAT GCCCCTGTGGTTGTCACGGTTCCTTTCCCTTTCATCGACGGCAAACCAAAATCTGTCCTT GTTGGAGAAACATCTGCCGACACCATTAGCATAGAAAATACCTCTTCTGAACCCGTGAAT TTGTGGAGTGTGAGAATATTTTCTTCCAATCCAGAAGACAGTTATGTGCTTTCTATGATG AAACCACCACTGAATGATACTGATGAGGAAGCAAAGAGGAATTTTCTTGGTTTGACTTCT GTGGAAGATCGTACACTCCAGCCTGGACAAACCCTTACAATTTGGCTCTCCTGTACGCCA AAAGACATTGGTTTGCATACATCAATCGTCCATGTTGATATCGGTGATGAGAAAATCGAG CGTGTGGCTTTTCTATTGGCCGATGATAATGTTTCCCAGGCTTTATTTTCTGACAAACCC TATTCCAGGAAACACACTCAGAAGAAGAAGTTTGAGTGCAGTTCATTTGTGCCAGGTTGT CGACCAACTCGGCAGCATAGTCAAGGATTCAAGTTCAAGCTCCCTCAGTTTGCAATACCT GCAGACATCCGCGAACTCATTCAAAGTAAACAGAGACCTGATGTCCTATCTGAAGAGCTG AACATGACAAACTATGCAAAATTCTTTAGCACTCTTTTAGTCATGGAAGAGATAAATTTG GAGGAGGAGATGAGATCATATGACATGGAGCGTATCTTAATGAGGAGGAGGGGTCTCGAA TTTTTGTCACTTGAGGTCCCTGGCTTGGCTGAGAAAAGGCCTTCACTAGTCCATGGAGAT TTTATATTTGTCAGACATGCTGGAAGTGATGCTCGGCCTTATCAGGGTTTCATTCACAAG GTTGAAGCGGATGAGATATTTTTGAAATTTGATAATCAGTTCCACCTTGCTCACCGTGAC AGGAATCAGTACGATGTTAGTTTCACATATAATAGACTGAACATGAGAAGGCTTTACAAG GCTATCCATGAAGCAGAACTTTTGGGACCTGACATTCTATTTCCCTGTCGATCATCCTCC GGAAGTGTGAAGAAGGGGCCGTTTAAACCTCTAAATCCACATATAAACACTGAGCAAGCT GATGCAGTTGCAACAATACTTGGCTGCCGAGGGGTTGCGCCATACGTGATATACGGACCT CCAGGAACTGGGAAGACCATGACCCTTGTGGAGTCTATTTTGCAGCTTTATACAGCCAAG AGGAGGGCAAATGTCCTCATATGTGCTGCTTCTAATAGTGCTGCTGACCATGTATTGGCA AAGCTTCTTCAGGCTAGCTATCTGATTCGACCAAGTGACATATTTAGGCTAAATGCTGCC AGCCGTCAATATGAGGATGTCGATCCTGATTTTATTCGATTTTGCTTCTTTCAAGATATG GTGTTCAAGTGTCCTCCATTGCAAGCACTATTGCGGTACAAGATAGTTATATCAACCTAC ATGAGTTCATCGATGCTGCAGTCTGAAGGCATTCGTCGGGGGCATTTCACACACATTTTT TTGGATGAGGCTGGTCAAGCCTCTGAACCAGAGGCTATGGTTCCTTTGTCGGGTTTGTGT GGAAGAGACACTGTGGTTGTGTTAGCAGGTGATCCCATGCAATTAGGGCCAGTGGTTTAT TGTAAACAAGCAGAGAAGGATGGTTTGGGGAAATCGTATCTGCAAAGGCTGCTCTTTGAA TACGAGCAGTACAGCACAGGGGATCCTAACTATGTGACAAAGCTAGTGAGGAATTATCGA TGCCATCCAGCAATCCTGGAATTACCATCAGAACTTTTCTATGGGGGAGAATTAATTGCC TGTAAAGAAGATGAAGTGTCGTCTATTTATGACAGCATTGATCTTCCTAACAAGTCGTTC CCTGTTCTTTTTGTTGGCATTCAGGGATGTGATGAGAGAGAAGGAAATAATCCTTCATGG TTTAATAGGATTGAAGCTAGTAAAGTAGTAAATATCATTAGGAATCTGACAAGGGGTGGT GATGTTCGTGAAGCTGACATAGGAGTCATTACTCCATATCGACAACAAGTTGTCAAGATA AAGAAGGCACTTGAGACATTTGAAATGCCTGACTTGAAAGTGGGAAGTGTCGAACAATTC CAGGGTCAGGAAAGGGAAATAATAATCATCTCCACAGTCAGGTCTACAGTAAAGCATAAT GAGTTTGACAAATTCTTCAACCTGGGATTCTTAAGCAATCACAGAAGGTTCAATGTTGCA ATCACTCGTGCCAAATCTTTGCTAATTATCATAGGAAACCCTCACATTATCACTAAGGAT CGGCATTGGGATAGGCTCCTGAGGTATTGTGCAGACAATGGTTCTTACCAAGGATGCCCA CTTCCACCACCAGAAGAGACCCAAGTCTCTGGATTTCGTGACAGCCAAGACGAACCTGCT AGGTGGGGTTACAACCAACAACAAGAGTCATCTGCTAACTACAGCTACAAGCAAGACCCA CACGACTCTGGTTCCGAACATGTAAATGGTTTGCCCTCCACTGAAAATGAAGTGGAATGG TCTGAGAAGACGCTGAATGAGGAGCACCAGCCATGTAGCAGTGCTGCTGAAGCAGACTCT CCTGAGTTCATGCTGAAGCAGAAGGCTGAGGAAGAGGAACATGTTGAGCAAGATGGCGTA CAGCCTGAGCAATGTCCAGCCAAGGACAACAAACTCCAAGATGCGTATGCAGCGAAGTAC TCCTTTCCTCCTGAATGGTGTGATGTTTCAAATATCCCTGCAACAGGATGGGATGATTGA

Peptide Sequence

PEP ID	Os03t0160400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3215854:3220186:-1 gene:Os03g0160400 transcript:Os03t0160400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ACL098Cp. (Os03t0160400-01)
Sequence	MGTYVRNYSDDEFSVAGEKPDVEFMDYQNDGSIQDYSLEDAPVVVTVPFPFIDGKPKSVL VGETSADTISIENTSSEPVNLWSVRIFSSNPEDSYVLSMMKPPLNDTDEEAKRNFLGLTS VEDRTLQPGQTLTIWLSCTPKDIGLHTSIVHVDIGDEKIERVAFLLADDNVSQALFSDKP YSRKHTQKKKFECSSFVPGCRPTRQHSQGFKFKLPQFAIPADIRELIQSKQRPDVLSEEL NMTNYAKFFSTLLVMEEINLEEEMRSYDMERILMRRRGLEFLSLEVPGLAEKRPSLVHGD FIFVRHAGSDARPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQYDVSFTYNRLNMRRLYK AIHEAELLGPDILFPCRSSSGSVKKGPFKPLNPHINTEQADAVATILGCRGVAPYVIYGP PGTGKTMTLVESILQLYTAKRRANVLICAASNSAADHVLAKLLQASYLIRPSDIFRLNAA SRQYEDVDPDFIRFCFFQDMVFKCPPLQALLRYKIVISTYMSSSMLQSEGIRRGHFTHIF LDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFE YEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF PVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQVVKI KKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVA ITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPLPPPEETQVSGFRDSQDEPA RWGYNQQQESSANYSYKQDPHDSGSEHVNGLPSTENEVEWSEKTLNEEHQPCSSAAEADS PEFMLKQKAEEEEHVEQDGVQPEQCPAKDNKLQDAYAAKYSFPPEWCDVSNIPATGWDD

Transcript Sequence

Transcript ID	Os03t0160400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3215854:3220186:-1 gene:Os03g0160400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ACL098Cp. (Os03t0160400-01)
Sequence	ATTCACATCCAAGATTCCAAAGTTCAGAGAGAGAAGAGTTGCAGCTTGTACAGAACAAAC AACTCATGAATGCCACTTCTTCCTTCCATGATATTACTATCTCCTGTGGCCTTCTGAATT TCTGCAAATTTGCAATCGAAGCCATCAACTGCTCATCCTCCTCCCCTCGCAAAACCTCTC CGCCTCAAACCCTCGCCGATCGATCGGCGGCTGGGCTTCTCAGGACGAACTGGGTGATTT GCCTCCTTCGTCTTCTTCTGTTGATAATTCCGCGGCATTGCGAGTTGTTTCTGTGTTTTC CCCCCTGATTTCGTTCGTGGTTTTGGTTTGATTGCGCCGTGGGATGCAGTAGGGTTTAGC GAGCGAGCGAGCAAGAGATCCCCCCCATCCATCCCGCGAGCGAGGGGTGGGGGCGCCGTC GTTCGTCGTCCGACGAATATCGCGGATTCAAGATGGGCACTTATGTTAGGAACTATTCAG ATGATGAATTCTCTGTGGCTGGCGAGAAGCCAGATGTAGAGTTCATGGACTATCAGAATG ATGGCTCTATTCAAGATTATTCACTCGAAGATGCCCCTGTGGTTGTCACGGTTCCTTTCC CTTTCATCGACGGCAAACCAAAATCTGTCCTTGTTGGAGAAACATCTGCCGACACCATTA GCATAGAAAATACCTCTTCTGAACCCGTGAATTTGTGGAGTGTGAGAATATTTTCTTCCA ATCCAGAAGACAGTTATGTGCTTTCTATGATGAAACCACCACTGAATGATACTGATGAGG AAGCAAAGAGGAATTTTCTTGGTTTGACTTCTGTGGAAGATCGTACACTCCAGCCTGGAC AAACCCTTACAATTTGGCTCTCCTGTACGCCAAAAGACATTGGTTTGCATACATCAATCG TCCATGTTGATATCGGTGATGAGAAAATCGAGCGTGTGGCTTTTCTATTGGCCGATGATA ATGTTTCCCAGGCTTTATTTTCTGACAAACCCTATTCCAGGAAACACACTCAGAAGAAGA AGTTTGAGTGCAGTTCATTTGTGCCAGGTTGTCGACCAACTCGGCAGCATAGTCAAGGAT TCAAGTTCAAGCTCCCTCAGTTTGCAATACCTGCAGACATCCGCGAACTCATTCAAAGTA AACAGAGACCTGATGTCCTATCTGAAGAGCTGAACATGACAAACTATGCAAAATTCTTTA GCACTCTTTTAGTCATGGAAGAGATAAATTTGGAGGAGGAGATGAGATCATATGACATGG AGCGTATCTTAATGAGGAGGAGGGGTCTCGAATTTTTGTCACTTGAGGTCCCTGGCTTGG CTGAGAAAAGGCCTTCACTAGTCCATGGAGATTTTATATTTGTCAGACATGCTGGAAGTG ATGCTCGGCCTTATCAGGGTTTCATTCACAAGGTTGAAGCGGATGAGATATTTTTGAAAT TTGATAATCAGTTCCACCTTGCTCACCGTGACAGGAATCAGTACGATGTTAGTTTCACAT ATAATAGACTGAACATGAGAAGGCTTTACAAGGCTATCCATGAAGCAGAACTTTTGGGAC CTGACATTCTATTTCCCTGTCGATCATCCTCCGGAAGTGTGAAGAAGGGGCCGTTTAAAC CTCTAAATCCACATATAAACACTGAGCAAGCTGATGCAGTTGCAACAATACTTGGCTGCC GAGGGGTTGCGCCATACGTGATATACGGACCTCCAGGAACTGGGAAGACCATGACCCTTG TGGAGTCTATTTTGCAGCTTTATACAGCCAAGAGGAGGGCAAATGTCCTCATATGTGCTG CTTCTAATAGTGCTGCTGACCATGTATTGGCAAAGCTTCTTCAGGCTAGCTATCTGATTC GACCAAGTGACATATTTAGGCTAAATGCTGCCAGCCGTCAATATGAGGATGTCGATCCTG ATTTTATTCGATTTTGCTTCTTTCAAGATATGGTGTTCAAGTGTCCTCCATTGCAAGCAC TATTGCGGTACAAGATAGTTATATCAACCTACATGAGTTCATCGATGCTGCAGTCTGAAG GCATTCGTCGGGGGCATTTCACACACATTTTTTTGGATGAGGCTGGTCAAGCCTCTGAAC CAGAGGCTATGGTTCCTTTGTCGGGTTTGTGTGGAAGAGACACTGTGGTTGTGTTAGCAG GTGATCCCATGCAATTAGGGCCAGTGGTTTATTGTAAACAAGCAGAGAAGGATGGTTTGG GGAAATCGTATCTGCAAAGGCTGCTCTTTGAATACGAGCAGTACAGCACAGGGGATCCTA ACTATGTGACAAAGCTAGTGAGGAATTATCGATGCCATCCAGCAATCCTGGAATTACCAT CAGAACTTTTCTATGGGGGAGAATTAATTGCCTGTAAAGAAGATGAAGTGTCGTCTATTT ATGACAGCATTGATCTTCCTAACAAGTCGTTCCCTGTTCTTTTTGTTGGCATTCAGGGAT GTGATGAGAGAGAAGGAAATAATCCTTCATGGTTTAATAGGATTGAAGCTAGTAAAGTAG TAAATATCATTAGGAATCTGACAAGGGGTGGTGATGTTCGTGAAGCTGACATAGGAGTCA TTACTCCATATCGACAACAAGTTGTCAAGATAAAGAAGGCACTTGAGACATTTGAAATGC CTGACTTGAAAGTGGGAAGTGTCGAACAATTCCAGGGTCAGGAAAGGGAAATAATAATCA TCTCCACAGTCAGGTCTACAGTAAAGCATAATGAGTTTGACAAATTCTTCAACCTGGGAT TCTTAAGCAATCACAGAAGGTTCAATGTTGCAATCACTCGTGCCAAATCTTTGCTAATTA TCATAGGAAACCCTCACATTATCACTAAGGATCGGCATTGGGATAGGCTCCTGAGGTATT GTGCAGACAATGGTTCTTACCAAGGATGCCCACTTCCACCACCAGAAGAGACCCAAGTCT CTGGATTTCGTGACAGCCAAGACGAACCTGCTAGGTGGGGTTACAACCAACAACAAGAGT CATCTGCTAACTACAGCTACAAGCAAGACCCACACGACTCTGGTTCCGAACATGTAAATG GTTTGCCCTCCACTGAAAATGAAGTGGAATGGTCTGAGAAGACGCTGAATGAGGAGCACC AGCCATGTAGCAGTGCTGCTGAAGCAGACTCTCCTGAGTTCATGCTGAAGCAGAAGGCTG AGGAAGAGGAACATGTTGAGCAAGATGGCGTACAGCCTGAGCAATGTCCAGCCAAGGACA ACAAACTCCAAGATGCGTATGCAGCGAAGTACTCCTTTCCTCCTGAATGGTGTGATGTTT CAAATATCCCTGCAACAGGATGGGATGATTGATCGGCCCGGTGAGTGGCCGCCTTTTTTT TTTTTTCCACAAGAAAGTATTTACCTAGGTGCATCTGGTCGAATAAATCGATATCAACCT TGTAAGGACTAACATTCAGGCACTCTGTAGCCTTTCCTTGAAAGGCTTTCAGCTCACCCT CAGTCCCATTCTTCTGTCTGCAGTCTGTAGCCTTCCCTTGGATTTCTTGATGCCATTATC TACCTGGTGTTTGAGTATACGGGAACAAATATGTTCCTGTGAAAACTCCGAAACTGATTA TCTTGCTAGCTATGGCAATATATATAGCATCCTCACTTGCTGTTATC