Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0159800-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:3192106:3195531:1 gene:Os03g0159800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os03t0159800-01);Similar to predicted protein. (Os03t0159800-02)
Sequence

CTGTCCTTGAATGTTCTTTGTCCAGATGAGTTGAGGCAAACTGTAAGAGCTGAGATTGAA
AAAAATCGCCGTTGCGACGATAAACAGAAGATTAAGTTCTTGATCAGTGAAGGTCTGCAA
CGATTAAAAGGCCTTGATGAGATGCTTGACATGACAGGAAATAGTTAA

Peptide Sequence

PEP ID

Os03t0159800-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:3192106:3195531:1 gene:Os03g0159800 transcript:Os03t0159800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os03t0159800-01);Similar to predicted protein. (Os03t0159800-02)
Sequence

LSLNVLCPDELRQTVRAEIEKNRRCDDKQKIKFLISEGLQRLKGLDEMLDMTGNS

Transcript Sequence

Transcript ID

Os03t0159800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3192106:3195531:1 gene:Os03g0159800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os03t0159800-01);Similar to predicted protein. (Os03t0159800-02)
Sequence

GCCCGGGAGGCGCACGGGTGGCGGCGTTCGGCGGTTCAGGGAGCGGTGTCCGGCGCCGGA
GCTTGCAGCTGAAGAGGCGGTATCTTGCTGAGGCTACAACATCGATTTTCTCCATCCACT
CATCTCCCAAAACCAAAGATGGACAACAGAACAAGGTTTATGATTTATGCGTAAAGGGAG
GCTCGGTGTGTAGTCAAAAATTGAAGGAGAGGGAGGGAGAGGTAACAAGTTTCTCCCCCA
AAACGCTTGGGGGTTCAGCTGAACCCCCATGCCCCACCGGTAGGTCTCACAGAATTGTAC
ATCATGCAGCTTTTTCTCCTGAATTTCCAGGGTCACGGGACAGTTTGCATGGCATGATCA
TATTTTGCTAAGGTTCTATTAGAGTGTCATTCAATGGCCCATTTCATGGATTTACGGGCT
TTCATCCTGCGTGCACGTGTTTTAAAGCTTTATAGGCAGGCCTTGCGCATGACTCGCCGA
GCTCCTGTGCATGCATGCGGTCAGACATTTTTAAACCTTGCTTTCCTATCTTTGCTGTCT
AATGTTTACTCTTGAAGTTACAACTAATAACTGTCCTTGAATGTTCTTTGTCCAGATGAG
TTGAGGCAAACTGTAAGAGCTGAGATTGAAAAAAATCGCCGTTGCGACGATAAACAGAAG
ATTAAGTTCTTGATCAGTGAAGGTCTGCAACGATTAAAAGGCCTTGATGAGATGCTTGAC
ATGACAGGAAATAGTTAACCTGAGTTTCATGTCGGATATGAGGTTCAATTTACACGGAAG
CTGGGTTTGCATGAGCTCCTGCAAAACATTCATTGCTCTGTGACCTCCTACACCTGATAT
TTCCAGAACCCATAAGGCATCAGGCCACATGAACTTGTGGCCTCCTGGATTAGAGTTTGT
TAGAACGGACCCATTCAGATTCTTTGCCTCGTTCTATCCAGGGGATAGGAAAGATATCAG
GCTCAGATATATTATCATGGTAGATCATCGATGGTGTGCGTGCATATGGGACGAAAATGC
AGTTACCGAGGCATCATGCTTGATTTTGCACACATCTATTCAGTCAAGATATGCTAGCGA
GCTTTAGAAGCAATTGGGATTTCTTTAGATGCTATCTTGAGACCCTGAATTTCCAGGTGT
TACATCTGAGAAAATAGCAGCTAGAGATGGATTAAGCTGAAGAAAGGTATCTGACTTGTC
GTTTAGGTACGTCTGCTTTGAGGCGATGATGTTCAACTTTTTCAGACCCGATGGCTTACT
TTTCATATTTGAGATACTGACCTCATGTTTCAGTCCTGATGTTCTTACCATTTCTTCGTT
GCAATTTCTTAGCTGGTATGATGAGGTCATTAAACATGTACTTTCTTTCCAACTATTTCA
TTATATGCCACAATAAAGATACTTGGTAATATATGCTGGTCCTGCCGTGCTGGTATATAA
AAATATGCTCCATGATCTTAAGCTTTTGTTTTGTTGTGATCATATCAAATGAAGGGATAC
CTGCTAACATTACTTCCATTAGGTAACTTATTATGTGACAATCGCTGTTTTTAGTGCTTT
CCGGACCCAATTTGTGGGGATCTCACTATCACCATCGATTGAGCTGGTGCTCACACTGTT
AATCTACTCTAGATTTTGGAATTTTGGATTATGTTGTCTTACTTAAAAATGAAGTGATTC
TCTAAGAAAAAAGACAACCCATGTGAAGCTGCCTGTAGTACTGATACATTGGTACAAATA
ATCACTATCAAATGCTTTCATTCATTTAGAGAAGGATCATCGTCATAAAGCTATGTTTGG
TTACTAAACAAAGATTCATGCATACATGATGCATACTCCCAAGTCCCAACAACACAACTT
GTGTGGTCCATATAATCTTGATAGGGTTCATCTGCTCTTGTCCATGATGCCTTGGACTCC
TTAACGAACCGGGTTCCCTTTTGTTAGGCACCGGTTTTCCTTCCCCTTTTTGATTTGCTT
TGCACCAGCTATTTGGCGTTCTATACATACCAAACTATTTCCTTTTGTTTGCAACTTGAT
CTGAAATTTGTTTAGACATGTACAGATATTCTGGATCTATCATAATTTAAACACTTTGAA
ATTAAATTGCCCTTCGTTCCGTCGCTGGCCTGGCGAATTTTTTTTTAATACTCTGAATTT
GAACTGAGAGTGATAGCCTGATAAGATTATCACTACTTACTTCAGTTCAGATAGTCACAG
AAGAAAATTGCAAGTAGAAATAAAATAACATACACTGATCAAACAAAGGGTATGCAGCTA
TAGGTTTGTTATAAACCATGGATTGTCAACTGACACAACTTTTATGGTACACAAAGCATA
TTGTAGTGATATATTTTTCAGTTATAGATGGTTCTAAGATAATACTCTTCGAACAGTCTC
CTGGCAGTATGCTAATGCATACTAGGCCTCGAAATTCTGTAGAAATCTTATGGGAATTAG
TCAATTCCTTCAATGTCTGCAGAAGTTGGGAAAACATTTTCAGTATTTCTGTGGATGCAT
TAGC