Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0159800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:3192052:3194414:1 gene:Os03g0159800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os03t0159800-01);Similar to predicted protein. (Os03t0159800-02)
Sequence

ATGGCCCATTTCATGGATTTACGGGCTTTCATCCTGCGTGCACGTGTTTTAAAGCTTTAT
AGGCAGGCCTTGCGCATGACTCGCCGAGCTCCTGTGCATGCATGCGATGAGTTGAGGCAA
ACTGTAAGAGCTGAGATTGAAAAAAATCGCCGTTGCGACGATAAACAGAAGATTAAGTTC
TTGATCAGTGAAGGTCTGCAACGATTAAAAGGCCTTGATGAGATGCTTGACATGACAGGA
AATAGTTAA

Peptide Sequence

PEP ID

Os03t0159800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:3192052:3194414:1 gene:Os03g0159800 transcript:Os03t0159800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os03t0159800-01);Similar to predicted protein. (Os03t0159800-02)
Sequence

MAHFMDLRAFILRARVLKLYRQALRMTRRAPVHACDELRQTVRAEIEKNRRCDDKQKIKF
LISEGLQRLKGLDEMLDMTGNS

Transcript Sequence

Transcript ID

Os03t0159800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3192052:3194414:1 gene:Os03g0159800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os03t0159800-01);Similar to predicted protein. (Os03t0159800-02)
Sequence

AACCGGTCAAACCCTAGCTTCTCCCTTCCTCTCCCCTGGCGGCGACGGCCTCAAGCCCGG
GAGGCGCACGGGTGGCGGCGTTCGGCGGTTCAGGGAGCGGTGTCCGGCGCCGGAGCTTGC
AGCTGAAGAGGCGGTATCTTGCTGAGGCTACAACATCGATTTTCTCCATCCACTCATCTC
CCAAAACCAAAGGGAGGCTCGGTGTGTAGTCAAAAATTGAAGGAGAGGGAGGGAGAGGGT
CACGGGACAGTTTGCATGGCATGATCATATTTTGCTAAGGTTCTATTAGAGTGTCATTCA
ATGGCCCATTTCATGGATTTACGGGCTTTCATCCTGCGTGCACGTGTTTTAAAGCTTTAT
AGGCAGGCCTTGCGCATGACTCGCCGAGCTCCTGTGCATGCATGCGATGAGTTGAGGCAA
ACTGTAAGAGCTGAGATTGAAAAAAATCGCCGTTGCGACGATAAACAGAAGATTAAGTTC
TTGATCAGTGAAGGTCTGCAACGATTAAAAGGCCTTGATGAGATGCTTGACATGACAGGA
AATAGTTAACCTGAGTTTCATGTCGGATATGAGGTTCAATTTACACGGAAGCTGGGTTTG
CATGAGCTCCTGCAAAACATTCATTGCTCTGTGACCTCCTACACCTGATATTTCCAGAAC
CCATAAGGCATCAGGCCACATGAACTTGTGGCCTCCTGGATTAGAGTTTGTTAGAACGGA
CCCATTCAGATTCTTTGCCTCGTTCTATCCAGGGGATAGGAAAGATATCAGGCTCAGATA
TATTATCATGGTAGATCATCGATGGTGTGCGTGCATATGGGACGAAAATGCAGTTACCGA
GGCATCATGCTTGATTTTGCACACATCTATTCAGTCAAGATATGCTAGCGAGCTTTAGAA
GCAATTGGGATTTCTTTAGATGCTATCTTGAGACCCTGAATTTCCAGGTGTTACATCTGA
GAAAATAGCAGCTAGAGATGGATTAAGCTGAAGAAAGGTATCTGACTTGTCGTTTAGGTA
CGTCTGCTTTGAGGCGATGATGTTCAACTTTTTCAGACCCGATGGCTTACTTTTCATATT
TGAGATACTGACCTCATGTTTCAGTCCTGATGTTCTTACCATTTCTTCGTTGCAATTTCT
TAGCTGGTATGATGAGGTCATTAAACATGTACTTTCTTTCCAACTATTTCATTATATGCC
ACAATAAAGATACTTGGT