Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0158900-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:3156837:3158309:1 gene:Os03g0158900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pentatricopeptide (PPR) repeat-containing protein. (Os03t0158900-00)
Sequence	ATGCGTCCGTACATCCCCAAGCAAACCTTCGCTTTCTGCCACTCCCTCCTCTCCTCGCGT CTCCTCCTCCCGTCCGCCGCCGCCGCCCCCACGGCGCCGGCCCTACCCGTGCAGGCGCTA CTCACCACCGCCGGCCTCCTGCCGCGCCACCCCGACCTCTCCCTGGTCGCGCTCAACTCG CTCCTCCGCGTCCTCTCCCGGCGCGCCTCCTCCCCGGCCCACCCGCTCCTCGCGCTCCGC CTCCTCCTGCTCATGCTCTCCCCCGCCTCTCCCCTCCCGCCGCCCGACCACCTCTCCTTT CCCTTCGCGCTCTCCGCCGCCGCCACCGTCTCCCCGTCCCCCGGGGCCCAGCTCCACGCG CTCCTCGTGAAGAATGGCCACTTCCCCTCCGACCACTACGTCACCACCGCGCTGCTGCAG CTGCAGCTGCACGCGGCCCGGCCGGATGACGCGCGAAGGGTGTTCGACGAATTGCCCAGG CGGGAGGCTATACATTACGACCTGGTGATCGGCGCGTACACGCGCACGGGGATGGCGGGC GAGGGGCTGGGGGTGTTCAGGGCGATGTTTGTGGATGGGGTGGCGCCGGACGCCGTTGTG CTCACGACGGCCATCGCGGCATGCGCGCAGGCTGGCGCGCTGGAGTGCGGGGAGTGGGTG CACCGGTACGTGGAGGCGAGCGCGCCGTGGCTGCTCGGGGACGCGTTCGTCGGGTCGGCG CTGGTGAGCATGTACGCCAAGTGCGGCTGCCTGGAGCAGGCGGTGCGGGTGTTCGACGGC ATGCCGGAGCGGAACGACTACGTCTGGGGCACCATGGTCGGCGCGTTTGCGGTGCACGGC ATGGCGGAGGAGGCCGTGTCGTGCCTGGACAGGATGGCGAGGGAGGACGGCGTGCGACCG GATGGCGTGGCGGTGCTTGGAGCGCTCTCCGCGTGTGCGCACGCCGGCAAGGTGGAGGAC GGGCTCAGGCTGCTCAAGGAGATGCGCCGCCGGTATGGCGTCGCGCCGGGGCACGAGCAC TACGCCTGCACAGTGGACATGCTCTGCCGTGTCGGTCGGCTGGAGGACGCGGTGGCACTG ATCGAGACAATGCCAATGGCCCCGCTCGCCTCCGTCTGGGGCTCCGTCTTGACCGGCTGC CGGACATACGCCAACGTGGAGCTGGCGGAGGTGGCCGCCGCCGAGCTCGGCAAGCTCGGC GCCGACGAGGGTGTGTATGTGCAGCTCTCCAACATCTACCTCGACTCCAACCGGAAGGAC GACGCGCGGAGGGTCAGGAAGCTGATCGGCAGCCGCGGCATCAGGAAGGTCCCCGCGTAC AGCGCGGTGGAGGTCGACGGCGTGGTGAGGTCGTTCGTCGCCGACGACCAGGCGCACCCG CAGCGCGTGGAGATATGGGAGGTGCTCGGGCTGCTTGCCGACCAAATGGGAGAGGAGCCG GACGAGGAGGAGGCCATGGCCGCGCTCTCGTGA

Peptide Sequence

PEP ID	Os03t0158900-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:3156837:3158309:1 gene:Os03g0158900 transcript:Os03t0158900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pentatricopeptide (PPR) repeat-containing protein. (Os03t0158900-00)
Sequence	MRPYIPKQTFAFCHSLLSSRLLLPSAAAAPTAPALPVQALLTTAGLLPRHPDLSLVALNS LLRVLSRRASSPAHPLLALRLLLLMLSPASPLPPPDHLSFPFALSAAATVSPSPGAQLHA LLVKNGHFPSDHYVTTALLQLQLHAARPDDARRVFDELPRREAIHYDLVIGAYTRTGMAG EGLGVFRAMFVDGVAPDAVVLTTAIAACAQAGALECGEWVHRYVEASAPWLLGDAFVGSA LVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAFAVHGMAEEAVSCLDRMAREDGVRP DGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGVAPGHEHYACTVDMLCRVGRLEDAVAL IETMPMAPLASVWGSVLTGCRTYANVELAEVAAAELGKLGADEGVYVQLSNIYLDSNRKD DARRVRKLIGSRGIRKVPAYSAVEVDGVVRSFVADDQAHPQRVEIWEVLGLLADQMGEEP DEEEAMAALS

Transcript Sequence

Transcript ID	Os03t0158900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3156837:3158309:1 gene:Os03g0158900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pentatricopeptide (PPR) repeat-containing protein. (Os03t0158900-00)
Sequence	ATGCGTCCGTACATCCCCAAGCAAACCTTCGCTTTCTGCCACTCCCTCCTCTCCTCGCGT CTCCTCCTCCCGTCCGCCGCCGCCGCCCCCACGGCGCCGGCCCTACCCGTGCAGGCGCTA CTCACCACCGCCGGCCTCCTGCCGCGCCACCCCGACCTCTCCCTGGTCGCGCTCAACTCG CTCCTCCGCGTCCTCTCCCGGCGCGCCTCCTCCCCGGCCCACCCGCTCCTCGCGCTCCGC CTCCTCCTGCTCATGCTCTCCCCCGCCTCTCCCCTCCCGCCGCCCGACCACCTCTCCTTT CCCTTCGCGCTCTCCGCCGCCGCCACCGTCTCCCCGTCCCCCGGGGCCCAGCTCCACGCG CTCCTCGTGAAGAATGGCCACTTCCCCTCCGACCACTACGTCACCACCGCGCTGCTGCAG CTGCAGCTGCACGCGGCCCGGCCGGATGACGCGCGAAGGGTGTTCGACGAATTGCCCAGG CGGGAGGCTATACATTACGACCTGGTGATCGGCGCGTACACGCGCACGGGGATGGCGGGC GAGGGGCTGGGGGTGTTCAGGGCGATGTTTGTGGATGGGGTGGCGCCGGACGCCGTTGTG CTCACGACGGCCATCGCGGCATGCGCGCAGGCTGGCGCGCTGGAGTGCGGGGAGTGGGTG CACCGGTACGTGGAGGCGAGCGCGCCGTGGCTGCTCGGGGACGCGTTCGTCGGGTCGGCG CTGGTGAGCATGTACGCCAAGTGCGGCTGCCTGGAGCAGGCGGTGCGGGTGTTCGACGGC ATGCCGGAGCGGAACGACTACGTCTGGGGCACCATGGTCGGCGCGTTTGCGGTGCACGGC ATGGCGGAGGAGGCCGTGTCGTGCCTGGACAGGATGGCGAGGGAGGACGGCGTGCGACCG GATGGCGTGGCGGTGCTTGGAGCGCTCTCCGCGTGTGCGCACGCCGGCAAGGTGGAGGAC GGGCTCAGGCTGCTCAAGGAGATGCGCCGCCGGTATGGCGTCGCGCCGGGGCACGAGCAC TACGCCTGCACAGTGGACATGCTCTGCCGTGTCGGTCGGCTGGAGGACGCGGTGGCACTG ATCGAGACAATGCCAATGGCCCCGCTCGCCTCCGTCTGGGGCTCCGTCTTGACCGGCTGC CGGACATACGCCAACGTGGAGCTGGCGGAGGTGGCCGCCGCCGAGCTCGGCAAGCTCGGC GCCGACGAGGGTGTGTATGTGCAGCTCTCCAACATCTACCTCGACTCCAACCGGAAGGAC GACGCGCGGAGGGTCAGGAAGCTGATCGGCAGCCGCGGCATCAGGAAGGTCCCCGCGTAC AGCGCGGTGGAGGTCGACGGCGTGGTGAGGTCGTTCGTCGCCGACGACCAGGCGCACCCG CAGCGCGTGGAGATATGGGAGGTGCTCGGGCTGCTTGCCGACCAAATGGGAGAGGAGCCG GACGAGGAGGAGGCCATGGCCGCGCTCTCGTGA