Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0158700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3151603:3165238:-1 gene:Os03g0158700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subtilisin 27, SUBTILISIN 27 description:Similar to PA domain containing protein, expressed. (Os03t0158700-01);Similar to P69C protein. (Os03t0158700-02)
Sequence	ATGGGGTGTTCGGGCACATATCTACTGGATGTGATTCAAGATATCCTGCTAAAATCGTAC CACACGATCAATCAGGTTCATATTGTGTACTTGGGCCACAACGATGGCCTCAATGCTTCC CTTACTGCAAGTCTTCATCTCCAACTTCTATCAGGAGTCTTTACAAGGTCGGATGAAGCA AGAGATGCTATTCTGTATAGCTACAGCTATGGATTCTCTGGTTTTGCTGCAATGCTCAAT TCAACGCAAGCTGCCAAATTATCTGAAGCAGAAGAGGTCATATCAATATTCAGGAGTAGG ATGCTCGAGATCCATACAACAAGAAGCTGGGACTTCATGGGCCTCAGCCTGCATATTCAG AATGAACAATCAGCCGGAATGCAATTGAAATACGGAGACGATATAATTGTCGGTATTCTT GATACAGGTGTGTGGCCTGAATCCCAGAGCTTCAGGGATGATGGCCACCTAGGCGACATC CCGTCGTCATGGCGCGGCACGTGTGTGGAGGGCGAGAAGTTCGACCCGGCCACGGCGTGC AACCGGAAGCTCATCGGCGCGCGCTACTACCTCGCCGGCTTCGAGAGCGAGGTCGGTCCG CTCAACACCAGCGGCGGCGCCGAGTACCGGTCGCCGCGGGACCGCGTCGGGCACGGCACG CACACGGCGTCGACGGCGGTGGGCGCCGTGTCGCCCGACGCCAGCTACGTCGGCGGCCTG GGCCGCGGCGTGGCGCGCGGGGGCGCGCCGTGGTCGCGGCTCGCCGTGTACAAGGTGTGC TGGTTCAAGGACCTGACGGGCCGGTGCAGCGACGCCGACATCCTGGCGGCGTTCGACGAC GCGCTGCGCGACGGCGTCCACGTGATCTCGGCGTCCCTCGGCTCGACGCCGCCGCTCATG CCGCTGTTCATGACGAGCACCGAGATCGGGGCGTTCCACGCGATGCAGCTCGGCGTGCCG GCGGTGTTCTCGGCCGGGAACGACGGGCCCGACGCCGCCATGGTGCAGAACGTGTCGCCG TGGGTGATCACCGTCGCCGCCAGCACCATCGACAGGAGGTTCCCGACGGTGATCACGCTC GGCAACAATGTCTCCCTCGTGGGAGAGAGCTTCAATGTGAATGACATGAAGATGAGATTA GTAGAAAGCGGCAGTGTCTTCTCCGATGGGTCTTGCTCATTCGACCAGCTAACCAACGGG AGCCGGGCGGCGGCGTCCGGCAGGATCGTTCTGTGCTTCTCCACCACGACGGCGTCCAGC GGCGTCGCGGCGCTGGCGGTGTACGCCGCCGGCGGCGCCGGCCTGATCTTCGCCGAGACC ATCTCCCGCAGGTCGACGCAGGACAACTTCCTCCCCACCGTCCACGTCGACCTCCGCCAG GGCACCCGGATCCTCGACTACATCCGCGGCAGCAGCCGCCCGCCGACCGCGCGCTTCTCC CCGAGCACGACGCTCGTCGGCAAGTCGCCGGCGCCGGCCGTCGCCTACTTCTCCTCCAGG GGCCCCAGCTCCATCTCCCCTCACATCCTTAAGCCTGATGTCACCGCTCCCGGCGTGAAC ATCCTGGCGGCGTGGCCACCCATGTCGTCGCCGACGGTGATCCCGCTGGACAAGCGCTCC GTGACGTGGAACTTCGACTCGGGCACGTCCATGTCGTGCCCGCACGTCTCCGGCATCGTC GCCGTCGTCAGGGCCGTGCACCCGACGTGGTCGCCGGCAGCCATCAAGTCGGCGCTGATG ACCACGGCATACATGTACGACGACACGTCCGACGTGATGCTGGCCGGCGGGACGCTGAAG GCGGCGGACGCGTTCGACGTCGGCGCCGGCCACGTCGACCCGCTGCGCGCGCTGGACCCG GGCCTCGTCTACGACGCCGGCGTGCGCGACCACGTCCTCTTCCTCTGCGGCCTCGGCTAC ACCAGGTACCAGATACGCCAGATGGTGCTCCCCTCGCCGTCGCTCGACACGAGCTGCGGC GGCGAGGGCGGCGGCGCGGCGCCGCCGGAGTACGACCTCAACTACCCGGCCATCGTGCTC CCGCGGCTCAACGCGACGGTGACCGTGAAGCGGACGGTGACGAACATGGGGCCCCGGAGG GACGCCGTGTACCGCGCCGCCGTCGTCAGCCCGCACGGCGCGCGCGCCGCCGTGTGGCCG CCGGCGCTGTCCTTCTCCCCGTACCGCGACACGGCCTCCTACTACGTGACCGTCGCGCCG GCGAAGCTGTCGCGCGGCCGGTACGACTTCGGCGAGATCGTCTGGTCCGACGGCTACCAC CGCGTCCGCACGCCGCTCGTCGTCAGGGTCACCACCATGCCCGACACCGACACCGGCGTC GACGTCGACGTCGCCGCCGCGCGCGCCATGGACACGGCTACTGCCACCCAGCTGCAGGAT TCCTAG

Peptide Sequence

PEP ID	Os03t0158700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3151603:3165238:-1 gene:Os03g0158700 transcript:Os03t0158700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subtilisin 27, SUBTILISIN 27 description:Similar to PA domain containing protein, expressed. (Os03t0158700-01);Similar to P69C protein. (Os03t0158700-02)
Sequence	MGCSGTYLLDVIQDILLKSYHTINQVHIVYLGHNDGLNASLTASLHLQLLSGVFTRSDEA RDAILYSYSYGFSGFAAMLNSTQAAKLSEAEEVISIFRSRMLEIHTTRSWDFMGLSLHIQ NEQSAGMQLKYGDDIIVGILDTGVWPESQSFRDDGHLGDIPSSWRGTCVEGEKFDPATAC NRKLIGARYYLAGFESEVGPLNTSGGAEYRSPRDRVGHGTHTASTAVGAVSPDASYVGGL GRGVARGGAPWSRLAVYKVCWFKDLTGRCSDADILAAFDDALRDGVHVISASLGSTPPLM PLFMTSTEIGAFHAMQLGVPAVFSAGNDGPDAAMVQNVSPWVITVAASTIDRRFPTVITL GNNVSLVGESFNVNDMKMRLVESGSVFSDGSCSFDQLTNGSRAAASGRIVLCFSTTTASS GVAALAVYAAGGAGLIFAETISRRSTQDNFLPTVHVDLRQGTRILDYIRGSSRPPTARFS PSTTLVGKSPAPAVAYFSSRGPSSISPHILKPDVTAPGVNILAAWPPMSSPTVIPLDKRS VTWNFDSGTSMSCPHVSGIVAVVRAVHPTWSPAAIKSALMTTAYMYDDTSDVMLAGGTLK AADAFDVGAGHVDPLRALDPGLVYDAGVRDHVLFLCGLGYTRYQIRQMVLPSPSLDTSCG GEGGGAAPPEYDLNYPAIVLPRLNATVTVKRTVTNMGPRRDAVYRAAVVSPHGARAAVWP PALSFSPYRDTASYYVTVAPAKLSRGRYDFGEIVWSDGYHRVRTPLVVRVTTMPDTDTGV DVDVAAARAMDTATATQLQDS

Transcript Sequence

Transcript ID	Os03t0158700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3151603:3165238:-1 gene:Os03g0158700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subtilisin 27, SUBTILISIN 27 description:Similar to PA domain containing protein, expressed. (Os03t0158700-01);Similar to P69C protein. (Os03t0158700-02)
Sequence	GGAGTTGAGACTTGAGACCCCTTGACCTTGGTTGGGTTTGGTTGGGTTTGCTTTGCCCTC ACTCCTTTCCAAACTGCTTTCTTGGTTGTGGTTGGGAGTTGCAAGGAATGCACTCATCTA GCCTCCATCTGCTGCTTGAATCTTGATCTTTCAGTGAGATGGATGGATGGAATGATGGGG TTTCTTGGTGGACTTGGATATGGTGGTGACTAGTGGTGCCCATCACCACCCACTAATCAC TACTCCTACTCAGTAACTGCGGCCACAGATTTTTCAGGAATACTGGGACACTTTGCCCTC TCTTCGAAAAATCTTGTCAATGCGACTTCTCTAGATATCACAGCTGACAGTGATGAGTTT GATGCTTTGCAAGGCAGGTTGGGAGGACAGTTCAATAAATACTCCACAGTTTCCATCCCA TGTCTGATGAAGGTTCAGGAGTTCATGTGTTGGAAAGCCTACCTGCAAGGCTGCAACTGG CCATAAGAATCCTCCTGCAAAAAATGTATACTCATTTTTCATGAACTGCGTAGAATGGAC AGTTGCCATCATCAATCCATCCTTGCCAGTTGCCACCCAGATGCCAGAAAATGATTTGGC ATCTGAAGTTTCATAACTATACAAAATATGCAGAACTTAAAATTGATAGTACACCATGCA GTAAGCTTCTACGGTGAGTCTAAAAACATGTACTCCTGTATCAAAACCATTGTTCTGACA ATACCGACCAGCCTCCCAAATCTCAATTGGATGGAACATCATCAATTGACATGAATGCAG GCAGCCACTGAACATGAATGCAGATCCAACCCATATGGAACCCATTGTTTGCTCTGTTGT ATCCAATGATGCAAATTTACATATTATAATGCACAGAAAAGGCAAGATTGATGGTCGGTG AAGCATGGTTTTTCTGTGAAGTGAAGAAATGTGATTGATTGAATTCATGTCATGGGGTGT TCGGGCACATATCTACTGGATGTGATTCAAGATATCCTGCTAAAATCGTACCACACGATC AATCAGGTTCATATTGTGTACTTGGGCCACAACGATGGCCTCAATGCTTCCCTTACTGCA AGTCTTCATCTCCAACTTCTATCAGGAGTCTTTACAAGGTCGGATGAAGCAAGAGATGCT ATTCTGTATAGCTACAGCTATGGATTCTCTGGTTTTGCTGCAATGCTCAATTCAACGCAA GCTGCCAAATTATCTGAAGCAGAAGAGGTCATATCAATATTCAGGAGTAGGATGCTCGAG ATCCATACAACAAGAAGCTGGGACTTCATGGGCCTCAGCCTGCATATTCAGAATGAACAA TCAGCCGGAATGCAATTGAAATACGGAGACGATATAATTGTCGGTATTCTTGATACAGGT GTGTGGCCTGAATCCCAGAGCTTCAGGGATGATGGCCACCTAGGCGACATCCCGTCGTCA TGGCGCGGCACGTGTGTGGAGGGCGAGAAGTTCGACCCGGCCACGGCGTGCAACCGGAAG CTCATCGGCGCGCGCTACTACCTCGCCGGCTTCGAGAGCGAGGTCGGTCCGCTCAACACC AGCGGCGGCGCCGAGTACCGGTCGCCGCGGGACCGCGTCGGGCACGGCACGCACACGGCG TCGACGGCGGTGGGCGCCGTGTCGCCCGACGCCAGCTACGTCGGCGGCCTGGGCCGCGGC GTGGCGCGCGGGGGCGCGCCGTGGTCGCGGCTCGCCGTGTACAAGGTGTGCTGGTTCAAG GACCTGACGGGCCGGTGCAGCGACGCCGACATCCTGGCGGCGTTCGACGACGCGCTGCGC GACGGCGTCCACGTGATCTCGGCGTCCCTCGGCTCGACGCCGCCGCTCATGCCGCTGTTC ATGACGAGCACCGAGATCGGGGCGTTCCACGCGATGCAGCTCGGCGTGCCGGCGGTGTTC TCGGCCGGGAACGACGGGCCCGACGCCGCCATGGTGCAGAACGTGTCGCCGTGGGTGATC ACCGTCGCCGCCAGCACCATCGACAGGAGGTTCCCGACGGTGATCACGCTCGGCAACAAT GTCTCCCTCGTGGGAGAGAGCTTCAATGTGAATGACATGAAGATGAGATTAGTAGAAAGC GGCAGTGTCTTCTCCGATGGGTCTTGCTCATTCGACCAGCTAACCAACGGGAGCCGGGCG GCGGCGTCCGGCAGGATCGTTCTGTGCTTCTCCACCACGACGGCGTCCAGCGGCGTCGCG GCGCTGGCGGTGTACGCCGCCGGCGGCGCCGGCCTGATCTTCGCCGAGACCATCTCCCGC AGGTCGACGCAGGACAACTTCCTCCCCACCGTCCACGTCGACCTCCGCCAGGGCACCCGG ATCCTCGACTACATCCGCGGCAGCAGCCGCCCGCCGACCGCGCGCTTCTCCCCGAGCACG ACGCTCGTCGGCAAGTCGCCGGCGCCGGCCGTCGCCTACTTCTCCTCCAGGGGCCCCAGC TCCATCTCCCCTCACATCCTTAAGCCTGATGTCACCGCTCCCGGCGTGAACATCCTGGCG GCGTGGCCACCCATGTCGTCGCCGACGGTGATCCCGCTGGACAAGCGCTCCGTGACGTGG AACTTCGACTCGGGCACGTCCATGTCGTGCCCGCACGTCTCCGGCATCGTCGCCGTCGTC AGGGCCGTGCACCCGACGTGGTCGCCGGCAGCCATCAAGTCGGCGCTGATGACCACGGCA TACATGTACGACGACACGTCCGACGTGATGCTGGCCGGCGGGACGCTGAAGGCGGCGGAC GCGTTCGACGTCGGCGCCGGCCACGTCGACCCGCTGCGCGCGCTGGACCCGGGCCTCGTC TACGACGCCGGCGTGCGCGACCACGTCCTCTTCCTCTGCGGCCTCGGCTACACCAGGTAC CAGATACGCCAGATGGTGCTCCCCTCGCCGTCGCTCGACACGAGCTGCGGCGGCGAGGGC GGCGGCGCGGCGCCGCCGGAGTACGACCTCAACTACCCGGCCATCGTGCTCCCGCGGCTC AACGCGACGGTGACCGTGAAGCGGACGGTGACGAACATGGGGCCCCGGAGGGACGCCGTG TACCGCGCCGCCGTCGTCAGCCCGCACGGCGCGCGCGCCGCCGTGTGGCCGCCGGCGCTG TCCTTCTCCCCGTACCGCGACACGGCCTCCTACTACGTGACCGTCGCGCCGGCGAAGCTG TCGCGCGGCCGGTACGACTTCGGCGAGATCGTCTGGTCCGACGGCTACCACCGCGTCCGC ACGCCGCTCGTCGTCAGGGTCACCACCATGCCCGACACCGACACCGGCGTCGACGTCGAC GTCGCCGCCGCGCGCGCCATGGACACGGCTACTGCCACCCAGCTGCAGGATTCCTAGCTC AGCTTGTTCAGAAACCTGGTTTCATCTGGTCATCAAATCATCAGACTACAAAAATTGAGA TCTTTTTGGGTGTGGATTTCTCGAGCTTGGAGTTAAAATTTCTTCGGACAAGTAGCCACT AGGTGTCAGTGTGTCACTGGTCAAGTACTACTAAATGAGCAAATTTCTGGATGCT