Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0158500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3126216:3130478:-1 gene:Os03g0158500 gene_biotype:protein_coding transcript_biotype:protein_coding description:YT521-B-like protein family protein. (Os03t0158500-01);Similar to YT521-B-like family protein, expressed. (Os03t0158500-02);Similar to YT521-B-like family protein, expressed. (Os03t0158500-03);Similar to YT521-B-like family protein, expressed. (Os03t0158500-04)
Sequence	ATGGCCGCCGTCGCGCCGCCTCAGGTCCCGGTCGTCGCGCCGGCGCCCGCTGCTGCTGCT GCTCCTCCTGCCCCGGCTCCTGCCGCCGCCGCCACCGCTGCCCCCGTCGCGGATCAAACC ACGGATCTGCTGCAGAAGTTGTCTTTGGATTCGCAGCCCAAGGCGGTGGATGCGGCCACC GAGCCCGCCGGCGCTAAGAAGGGGCCTGCAGCCAGCCAGCCTCTTAGCGTGGCGATTCCT CCTGAGCGGTCCATCACGCCAGTGCTTCAGGATTTTATGGATCCCAACATGTTCTACCTG CCAGCATACTACTATGGAGGTTACGACGGATCTGTGAGCGAGTGGGATGATTATCCTAGA TATGTAAATCCAGATGGAGTGGAGATTACCCCAGCAGTATATGGAGATATTTATGGATAT GGGTATGCTCCTTATGGTGCATACTCCCCTGCTAGTTCCCCAGTTCCAACGGTTGATGGC CAAATGTTTGGCCAGCACTATCAGTATCCAACTTCGTATTATCAGCCTCCTACACCAGTT CCTTCTACCACTCAAGGCGACCTGCAGCCTTCTGCCAATCCTGACAAGCCAACAGCTAAG GCAGATCCAGCTAAAACAACCACAAATGGTGCTCCTAATGGTACTGTTCACAGTAACAGT GGAACTGTACCCCTTGGATCAAGCCAGCAAAATTCATCACTGACCCCTGATGGAACTTAT AGGGCACCCTTGCTAGGTGGAGTTCCTTCTGCTGGTTACCTGGACTCTACATATGGGTAT GACAGCACAGGAGCACACTTTGCATGGTATGATGGTTCTGCTTATACAAATGGACAGCAG AGAACAACTACAACCAATCACATGTCGTCTTCAACATTCAGTAATGGCTCTTCTGCAAGG ACTCAAAACAAGGGCTCCACACCTCAGCAGATGGGCATGAATAACAGAAGACCTACAACT ACAACAGGATCAGCTGCTCCTACATATCCGAATAGGATGTACCCGAGCACCCGGTCTTAC AGCCAGTATGGAAACTCATACAAAACTGGTCTTTCGTACAGCACAAATGGTTATGGAAGT AATGGCTATGGTAGTAATGGTTATGATTCCAGGCTATATGGTCGGTGGGGTCTTAGTATG GATAACAGGTACAAGCCAAGAGGCCGTGGTAACGGGTACTATGGTTTTGGCAATGAGAGT CAGGATGGAACAATTGAGTTGAACAGAGGTCCTAGATCAGGCCGTTTCAAGAACCAGAAA TTGTTTGGCCATACTGTCACTATTGCTGTGAAAGGGCAGAGCCTTCCTACAAGTGACAGC ATGAATGCTACTGATGTACCTGATAGAACACAGTTCAACCGAGATGACTTCCCTGTCCAA TATGATGATGCAAAGTTCTTTGTCATTAAATCATACAGTGAGGATGATATCCATAAGAGC ATAAAGTACAATGTGTGGGCAAGTACCACTAATGGAAACAAGAAGCTTGATGCTGCTTAT CAGGAAGCTCAGGCTAAGAGCTCCAAATGCCCAATATTCTTGTTTTTCTCGGTTAATACT AGTGGGCAGTTTGTTGGTGTTGCTGAAATGACTGGCGCTGTTGATTTTGAGAAGACCTTG GAGTACTGGCAACAAGATAAGTGGAATGGTTCCTTATCTCTCAAGTGGCACATTGTCAAA GATGTGCCCAACAATATTCTCAAGCACATCATCCTAGAGAACAATGAGAACAAGCCAGTG ACAAATAGCCGTGACACACAAGAGGTAAACCTTGACCAAGGCATTCAAATGCTTAAGATA TTCAAGGAGCATGTCAGTAAGACCTCCATCTTGGATGACTTTGCTTTCTATGAGAACCGT CAGAAGTTGATGCAGGAAAAGAGGGTGAAACAACAGCAGATCCAAAAGCAGGTCTGGGAC AGTAGGGCTCCAAGTTCTGTCACTGGAGAGAAGCAGCAGGATGCTGCTACTGCGAAGCCA AAGCTACCAAATGGCGTCAATGGAGAACTGAAGGTTCCTGCAGAGAACGGCACAGCTCCA GTCGTTACCTATGCAGCGAAGGTCGCCCAAACAGCAGCGACTGAGAAGCCTGCCCTTGCC AACGGCACCGTCAAAGCTAGTTAA

Peptide Sequence

PEP ID	Os03t0158500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3126216:3130478:-1 gene:Os03g0158500 transcript:Os03t0158500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:YT521-B-like protein family protein. (Os03t0158500-01);Similar to YT521-B-like family protein, expressed. (Os03t0158500-02);Similar to YT521-B-like family protein, expressed. (Os03t0158500-03);Similar to YT521-B-like family protein, expressed. (Os03t0158500-04)
Sequence	MAAVAPPQVPVVAPAPAAAAAPPAPAPAAAATAAPVADQTTDLLQKLSLDSQPKAVDAAT EPAGAKKGPAASQPLSVAIPPERSITPVLQDFMDPNMFYLPAYYYGGYDGSVSEWDDYPR YVNPDGVEITPAVYGDIYGYGYAPYGAYSPASSPVPTVDGQMFGQHYQYPTSYYQPPTPV PSTTQGDLQPSANPDKPTAKADPAKTTTNGAPNGTVHSNSGTVPLGSSQQNSSLTPDGTY RAPLLGGVPSAGYLDSTYGYDSTGAHFAWYDGSAYTNGQQRTTTTNHMSSSTFSNGSSAR TQNKGSTPQQMGMNNRRPTTTTGSAAPTYPNRMYPSTRSYSQYGNSYKTGLSYSTNGYGS NGYGSNGYDSRLYGRWGLSMDNRYKPRGRGNGYYGFGNESQDGTIELNRGPRSGRFKNQK LFGHTVTIAVKGQSLPTSDSMNATDVPDRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKS IKYNVWASTTNGNKKLDAAYQEAQAKSSKCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTL EYWQQDKWNGSLSLKWHIVKDVPNNILKHIILENNENKPVTNSRDTQEVNLDQGIQMLKI FKEHVSKTSILDDFAFYENRQKLMQEKRVKQQQIQKQVWDSRAPSSVTGEKQQDAATAKP KLPNGVNGELKVPAENGTAPVVTYAAKVAQTAATEKPALANGTVKAS

Transcript Sequence

Transcript ID	Os03t0158500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3126216:3130478:-1 gene:Os03g0158500 gene_biotype:protein_coding transcript_biotype:protein_coding description:YT521-B-like protein family protein. (Os03t0158500-01);Similar to YT521-B-like family protein, expressed. (Os03t0158500-02);Similar to YT521-B-like family protein, expressed. (Os03t0158500-03);Similar to YT521-B-like family protein, expressed. (Os03t0158500-04)
Sequence	TTTTCCCCTTTCACACCGTACTGCCGGTTTGCTAGCCGCCTCGCTGCTCCGGCTCCGCCT CTCCACCCATCCCGCCGCCACCGCCGCCGCCGCCGCCTCATCCTCCTCTCTACCCGCGCC GCCGCGCCTAGCTATCTCTAGGAAGGGAGGAGAAGGGGCCGGGTGCGCGCGCGCTCGCTC GCTCGCTCGTCTCGCCGGATCTACAGCCGCCGCCGCCGCCTCCGGGTGTTCTCTGCTTGG GATCTATCTCGTGAGCCAAAGCCATGGCCGCCGTCGCGCCGCCTCAGGTCCCGGTCGTCG CGCCGGCGCCCGCTGCTGCTGCTGCTCCTCCTGCCCCGGCTCCTGCCGCCGCCGCCACCG CTGCCCCCGTCGCGGATCAAACCACGGATCTGCTGCAGAAGTTGTCTTTGGATTCGCAGC CCAAGGCGGTGGATGCGGCCACCGAGCCCGCCGGCGCTAAGAAGGGGCCTGCAGCCAGCC AGCCTCTTAGCGTGGCGATTCCTCCTGAGCGGTCCATCACGCCAGTGCTTCAGGATTTTA TGGATCCCAACATGTTCTACCTGCCAGCATACTACTATGGAGGTTACGACGGATCTGTGA GCGAGTGGGATGATTATCCTAGATATGTAAATCCAGATGGAGTGGAGATTACCCCAGCAG TATATGGAGATATTTATGGATATGGGTATGCTCCTTATGGTGCATACTCCCCTGCTAGTT CCCCAGTTCCAACGGTTGATGGCCAAATGTTTGGCCAGCACTATCAGTATCCAACTTCGT ATTATCAGCCTCCTACACCAGTTCCTTCTACCACTCAAGGCGACCTGCAGCCTTCTGCCA ATCCTGACAAGCCAACAGCTAAGGCAGATCCAGCTAAAACAACCACAAATGGTGCTCCTA ATGGTACTGTTCACAGTAACAGTGGAACTGTACCCCTTGGATCAAGCCAGCAAAATTCAT CACTGACCCCTGATGGAACTTATAGGGCACCCTTGCTAGGTGGAGTTCCTTCTGCTGGTT ACCTGGACTCTACATATGGGTATGACAGCACAGGAGCACACTTTGCATGGTATGATGGTT CTGCTTATACAAATGGACAGCAGAGAACAACTACAACCAATCACATGTCGTCTTCAACAT TCAGTAATGGCTCTTCTGCAAGGACTCAAAACAAGGGCTCCACACCTCAGCAGATGGGCA TGAATAACAGAAGACCTACAACTACAACAGGATCAGCTGCTCCTACATATCCGAATAGGA TGTACCCGAGCACCCGGTCTTACAGCCAGTATGGAAACTCATACAAAACTGGTCTTTCGT ACAGCACAAATGGTTATGGAAGTAATGGCTATGGTAGTAATGGTTATGATTCCAGGCTAT ATGGTCGGTGGGGTCTTAGTATGGATAACAGGTACAAGCCAAGAGGCCGTGGTAACGGGT ACTATGGTTTTGGCAATGAGAGTCAGGATGGAACAATTGAGTTGAACAGAGGTCCTAGAT CAGGCCGTTTCAAGAACCAGAAATTGTTTGGCCATACTGTCACTATTGCTGTGAAAGGGC AGAGCCTTCCTACAAGTGACAGCATGAATGCTACTGATGTACCTGATAGAACACAGTTCA ACCGAGATGACTTCCCTGTCCAATATGATGATGCAAAGTTCTTTGTCATTAAATCATACA GTGAGGATGATATCCATAAGAGCATAAAGTACAATGTGTGGGCAAGTACCACTAATGGAA ACAAGAAGCTTGATGCTGCTTATCAGGAAGCTCAGGCTAAGAGCTCCAAATGCCCAATAT TCTTGTTTTTCTCGGTTAATACTAGTGGGCAGTTTGTTGGTGTTGCTGAAATGACTGGCG CTGTTGATTTTGAGAAGACCTTGGAGTACTGGCAACAAGATAAGTGGAATGGTTCCTTAT CTCTCAAGTGGCACATTGTCAAAGATGTGCCCAACAATATTCTCAAGCACATCATCCTAG AGAACAATGAGAACAAGCCAGTGACAAATAGCCGTGACACACAAGAGGTAAACCTTGACC AAGGCATTCAAATGCTTAAGATATTCAAGGAGCATGTCAGTAAGACCTCCATCTTGGATG ACTTTGCTTTCTATGAGAACCGTCAGAAGTTGATGCAGGAAAAGAGGGTGAAACAACAGC AGATCCAAAAGCAGGTCTGGGACAGTAGGGCTCCAAGTTCTGTCACTGGAGAGAAGCAGC AGGATGCTGCTACTGCGAAGCCAAAGCTACCAAATGGCGTCAATGGAGAACTGAAGGTTC CTGCAGAGAACGGCACAGCTCCAGTCGTTACCTATGCAGCGAAGGTCGCCCAAACAGCAG CGACTGAGAAGCCTGCCCTTGCCAACGGCACCGTCAAAGCTAGTTAACTGGATCACATAC CCCATGTTCCCTAGCTAGCCATGAAGAACAAGACGGTCCTGAAGAACTCAACAGGCATGT GGTCCCAAGGAACTGATGGTCTGGAAAACTCTTATCTGTGAAACTGGCAGCACGGGCCCA AGATCCTGCTGCTTGGCTGCTACTGGGGAGCAGTTGGCTAGTTAGTTTTGCCTAGTTTTC TTTTGCCGTATTCCCGTTTTCGGTTTGCTTTTTTTTAGCTCGCTCTAAGACTCCGTTTAT AGTATCGTCGAAAATGCCAGAAAAAAACCTAGCGGCAAAGACAACAAGTTGCAAAGACCA TGTCTGGCTTTGGTGCGTTGCGTTTCGCGCTTATTCAGTGGGGGGTGGAGTACTATAATC CCGTTGTTGAGTGGTTCTGGAAGTGGGTTAGATTGGTGCTATTTATTTTACTTAAAAGAA TCTTGCTTTATATACATCTGATGATGCAGGGTCTCGCCTCT