Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0158200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3115986:3120267:1 gene:Os03g0158200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 38 description:DEAD-like helicase, N-terminal domain containing protein. (Os03t0158200-01)
Sequence	ATGGCCGACGGCGGGAAGCCCCCGACGCCGGAGAAGAAGTCGTGGGCCGACGTAGAGGAG GAGGAGGAGGCCAAGGCGAAGGCGGCCGCGGCGGCGGAGGCGGCCTCCTCGTCTTCGTCG AACGAGCCGGCGGTGGACGCGCAGGCGAAGCAGATTGAGGCGCTGTCTCTCTCCGTGCCG GAGGAGCATGGCGGCAGCGGCGGCGGCGGGGACGACCAGGGCCCGCCTCTCCTCGACGAC TCGGATGAGTCCCAAATCCAAGCCGTGACCTCGGGCGGCACGGTGTACGAGTCGGCGGCG GCCTTCGAGGATCTGAAGCTGACGCCGGAGCTGCTCAAGGGGCTCCACGACGAGATGGGG TTCAGCCGGCCGAGTAAGATCCAGGCGGTGACCCTCCCCATGATCCTCACGCCGCCATAC AAGGACCTGATCGCGCAGGCGCACAACGGCTCCGGGAAGACCACCTGCTTCGTCCTCGGC ATGCTCAGCCGCGTCGACCCTAACCGGAAGGTCACGCAGGCCATCTGCATCTGCCCCACC AGGGAGCTTGCCCAGCAGAATAAATCGGTGCTTATGAGAATGGGGAAGTTTACTGGCATT ACCTGTGCATGTGCGATCCCACCGGCTCAGAAAGATTATGTGCCGATCGCTAAAATGCCA AAGATTACTGACCAGGTGGTGATCGGCACTTCTGGGACACTTATGAAGTGGATTAATCAT AAGAAGATCTTGACAAATGATATCAAGATACTTGTGTTTGATGAGGCAGACCATATGCTT GCCGAGGATGGCTTCAGGAGTGATTCTGAAAGGATTATGAGGGATATACAAAGAAGCGCT GGTGGCTGTCAGGTGCTTCTCTTTTCTGCGACATTCAATGAGAGAGTTAAAGATTTTGTT ACAAGGGTCATTAAGGATGGGAATCAAATATTTGTGAAGAAGGAAGAGCTTACTTTGGAA AAAGTCAAGCAATATAAAGTTCAAGTCCCTGATGAAAGGGCAAAAATAGCAGTCATAAAG GACAAGATTTTTGAGTTTGGACAAAAAGTTGGACAGGTTATCATTTTTGTTAGAACAAAG CAAAGTACTAAGGATGTCCACAATGCTTTGACATTAGAGGACTATGTATGCTCCTCGATT CAAGGATCCCTTGACCAATCAGAGAGGGAAAAGATAATACAGGAATTCAAAAATGGGTAC ACCAAGGTTCTTATATCAACTGATGTTCTTGCTCGAGGTTTCGACCAAGCACAGGTTAAC CTCGTCATCAATTATGACATGCCAATCAAGTTTGGCACAAGAGATGAACCTGATTATGAA GTGTACCTGCACAGAATTGGCAGAGCTGGTCGCTTTGGCCGAAAAGGAGCTGTTTTCAAC TTGCTATGCGGCGAAACAGATAACACTGTGATGAGAAAGATTGAGACCTACTTCCAGCAC AATGTTCCTGAGGTTCGTAATTGGCAAAGCGAGGAAGATTTTGAAAGAGCTCTGAAGGAT GCCGGCTTGGTTGAGTAA

Peptide Sequence

PEP ID	Os03t0158200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3115986:3120267:1 gene:Os03g0158200 transcript:Os03t0158200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 38 description:DEAD-like helicase, N-terminal domain containing protein. (Os03t0158200-01)
Sequence	MADGGKPPTPEKKSWADVEEEEEAKAKAAAAAEAASSSSSNEPAVDAQAKQIEALSLSVP EEHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMG FSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPT RELAQQNKSVLMRMGKFTGITCACAIPPAQKDYVPIAKMPKITDQVVIGTSGTLMKWINH KKILTNDIKILVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNERVKDFV TRVIKDGNQIFVKKEELTLEKVKQYKVQVPDERAKIAVIKDKIFEFGQKVGQVIIFVRTK QSTKDVHNALTLEDYVCSSIQGSLDQSEREKIIQEFKNGYTKVLISTDVLARGFDQAQVN LVINYDMPIKFGTRDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGETDNTVMRKIETYFQH NVPEVRNWQSEEDFERALKDAGLVE

Transcript Sequence

Transcript ID	Os03t0158200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3115986:3120267:1 gene:Os03g0158200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 38 description:DEAD-like helicase, N-terminal domain containing protein. (Os03t0158200-01)
Sequence	AGAAAGAAAAAAAACAAACGCGAACCGACTGCGAGTAGTAAGTAAGGCTAAGCATCCGTC TCCCCCCTTCTCGATTGTTCTCGATCTGCGGCGGCGGCGGCGGCGATGGCCGACGGCGGG AAGCCCCCGACGCCGGAGAAGAAGTCGTGGGCCGACGTAGAGGAGGAGGAGGAGGCCAAG GCGAAGGCGGCCGCGGCGGCGGAGGCGGCCTCCTCGTCTTCGTCGAACGAGCCGGCGGTG GACGCGCAGGCGAAGCAGATTGAGGCGCTGTCTCTCTCCGTGCCGGAGGAGCATGGCGGC AGCGGCGGCGGCGGGGACGACCAGGGCCCGCCTCTCCTCGACGACTCGGATGAGTCCCAA ATCCAAGCCGTGACCTCGGGCGGCACGGTGTACGAGTCGGCGGCGGCCTTCGAGGATCTG AAGCTGACGCCGGAGCTGCTCAAGGGGCTCCACGACGAGATGGGGTTCAGCCGGCCGAGT AAGATCCAGGCGGTGACCCTCCCCATGATCCTCACGCCGCCATACAAGGACCTGATCGCG CAGGCGCACAACGGCTCCGGGAAGACCACCTGCTTCGTCCTCGGCATGCTCAGCCGCGTC GACCCTAACCGGAAGGTCACGCAGGCCATCTGCATCTGCCCCACCAGGGAGCTTGCCCAG CAGAATAAATCGGTGCTTATGAGAATGGGGAAGTTTACTGGCATTACCTGTGCATGTGCG ATCCCACCGGCTCAGAAAGATTATGTGCCGATCGCTAAAATGCCAAAGATTACTGACCAG GTGGTGATCGGCACTTCTGGGACACTTATGAAGTGGATTAATCATAAGAAGATCTTGACA AATGATATCAAGATACTTGTGTTTGATGAGGCAGACCATATGCTTGCCGAGGATGGCTTC AGGAGTGATTCTGAAAGGATTATGAGGGATATACAAAGAAGCGCTGGTGGCTGTCAGGTG CTTCTCTTTTCTGCGACATTCAATGAGAGAGTTAAAGATTTTGTTACAAGGGTCATTAAG GATGGGAATCAAATATTTGTGAAGAAGGAAGAGCTTACTTTGGAAAAAGTCAAGCAATAT AAAGTTCAAGTCCCTGATGAAAGGGCAAAAATAGCAGTCATAAAGGACAAGATTTTTGAG TTTGGACAAAAAGTTGGACAGGTTATCATTTTTGTTAGAACAAAGCAAAGTACTAAGGAT GTCCACAATGCTTTGACATTAGAGGACTATGTATGCTCCTCGATTCAAGGATCCCTTGAC CAATCAGAGAGGGAAAAGATAATACAGGAATTCAAAAATGGGTACACCAAGGTTCTTATA TCAACTGATGTTCTTGCTCGAGGTTTCGACCAAGCACAGGTTAACCTCGTCATCAATTAT GACATGCCAATCAAGTTTGGCACAAGAGATGAACCTGATTATGAAGTGTACCTGCACAGA ATTGGCAGAGCTGGTCGCTTTGGCCGAAAAGGAGCTGTTTTCAACTTGCTATGCGGCGAA ACAGATAACACTGTGATGAGAAAGATTGAGACCTACTTCCAGCACAATGTTCCTGAGGTT CGTAATTGGCAAAGCGAGGAAGATTTTGAAAGAGCTCTGAAGGATGCCGGCTTGGTTGAG TAACACCATTGGAAATATGGCATCAGATGCGCTCTTCACTTGTGACGAACAGGCGCGTGA TATTTACCAGCTGAAACAGCTTCTAAAGCAAAGCAATCGAGCTTCTTGAGCTCATCCTTG GTTATTATGTCGAGAGCTGTGAATTCTGTTAAAGGGACTCATCCAAACAATTTTGATGCT ATGAGCTTATATGAAGCAAAGGTGTTCCTTCGCTATTTCGTGGGAACTTGTTGCCAGGAC TAGATCTACACTTGCATTATACTCTGTTACTTCGTGTACTTAACTGGGAACCTGTTTTGG TTTTTATGGCTTTGTCGTCGAGATGCGGTCACCGGTGTACGTTACGCCCTTGTGAAAAAA CTGGAAACCTCTTTCTGGGTCAGTG