Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0157900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3110725:3112384:1 gene:Os03g0157900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT). (Os03t0157900-01)
Sequence	ATGGCCGCCGCCGCCGCCGCCGCCACCACCCCCAACTCCCTCCTCCTCCGCCGCCCGGCG GCACCCAAGCCGGCCTCCGCGGCGGCCTCGCCGCTCCGTCTCCCCACGCGGGCAGCCAGG ATCTCCTGCGCGGCCGTGGCCACGCCCGCGCAGTCCTCCTCCTCCCCCGCCGCCGCCGCC GCCGACCGCGGGGTCTACAACTTCGCCGCGGGCCCGGCCACGCTGCCGCTCTCCGTGCTC CAGAGGGCGCAGGCGGAGCTCGTCGACTACCGCGGCTCCGGCATGAGCATCATGGAGATG AGCCACCGCGGGAAGGAGTTCGACGCCGCGATCAAGAAGGCGGAGGCCGACCTCCGCGCG CTCCTCGCCGTGCCCGACACCCACGAGGTGCTCTTCCTCCAGGGCGGCGCCACCTCCCAG TTCGCCGCCGCGCCGCTCAACCTCTGCGCCTCCCCCTCCGACCCCGCCGACTTCGTCGTC TCCGGGTCGTGGAGCGACAAGGCGTTCAAGGAGGCCAAGAAGTTCTCCGCCGCGTCCGTC GCCTGGTCCGGCAAGGACGGCAAGTACACCTCCCTCCCGCCCTTCGACGCCATCGAGCAG AACCCCGAGGCAAGGTTCCTCCACATCTGCTCCAACGAGACCATCCATGGCGTCGAGTTC AAGGACTACCCGGAGCCCAAGAACAAGTCGGGCATCCTCGTCGCCGACATGTCCTCCAAC TTCTGCTCCAAGCCCGTCGACGTCTCCCGCTTCGGCCTCATCTACGCCGGCGCGCAGAAG AACGTCGGCCCCTCCGGCGTCACCATCGCCATCGTCCGCAAGGACCTCGTCGGCAGCGCG CAGCCCATCACCCCGGTGATGCTCGACTACAAGACGCACGCGGACAACGCCTCCCTGTAC AACACCCCGCCGTGCTTCGCCATCTACATCTGCGGCCTCGTGTTCGAGGACCTGCTCGCG CAGGGCGGCCTCGCCGAGGTCGAGAAGAAGAACGCCCACAAGGCCGGCATCCTCTACGAC GCCATTGATGCCAGCGGCGGATACTACATCTGCCCCGTGGAGAAATCCGTGCGATCGCTG ATGAATGTGCCGTTCACCCTCGCCAAGGGTGGGGATTTTGAGAAGCAGTTCATCGCCGAG GCGGCCAAGGAGGGAATGGTGCAGCTCAAGGGGCACAGGTCGGTCGGCGGCGTGCGCGCC TCCATCTACAACGCCATGCCGCTCGCCGGTGTGGAGAAGCTCGTCGCGTTCATGAAGGAT TTCCAAGCCAGGAACCCTTAA

Peptide Sequence

PEP ID	Os03t0157900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3110725:3112384:1 gene:Os03g0157900 transcript:Os03t0157900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT). (Os03t0157900-01)
Sequence	MAAAAAAATTPNSLLLRRPAAPKPASAAASPLRLPTRAARISCAAVATPAQSSSSPAAAA ADRGVYNFAAGPATLPLSVLQRAQAELVDYRGSGMSIMEMSHRGKEFDAAIKKAEADLRA LLAVPDTHEVLFLQGGATSQFAAAPLNLCASPSDPADFVVSGSWSDKAFKEAKKFSAASV AWSGKDGKYTSLPPFDAIEQNPEARFLHICSNETIHGVEFKDYPEPKNKSGILVADMSSN FCSKPVDVSRFGLIYAGAQKNVGPSGVTIAIVRKDLVGSAQPITPVMLDYKTHADNASLY NTPPCFAIYICGLVFEDLLAQGGLAEVEKKNAHKAGILYDAIDASGGYYICPVEKSVRSL MNVPFTLAKGGDFEKQFIAEAAKEGMVQLKGHRSVGGVRASIYNAMPLAGVEKLVAFMKD FQARNP

Transcript Sequence

Transcript ID	Os03t0157900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3110725:3112384:1 gene:Os03g0157900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT). (Os03t0157900-01)
Sequence	CACTAGACAAAGCCCAAACCAAGGCCAAAACCCTCCTCCCCTCCTCTCCTCTCCATTCCG CCGCCATGGCCGCCGCCGCCGCCGCCGCCACCACCCCCAACTCCCTCCTCCTCCGCCGCC CGGCGGCACCCAAGCCGGCCTCCGCGGCGGCCTCGCCGCTCCGTCTCCCCACGCGGGCAG CCAGGATCTCCTGCGCGGCCGTGGCCACGCCCGCGCAGTCCTCCTCCTCCCCCGCCGCCG CCGCCGCCGACCGCGGGGTCTACAACTTCGCCGCGGGCCCGGCCACGCTGCCGCTCTCCG TGCTCCAGAGGGCGCAGGCGGAGCTCGTCGACTACCGCGGCTCCGGCATGAGCATCATGG AGATGAGCCACCGCGGGAAGGAGTTCGACGCCGCGATCAAGAAGGCGGAGGCCGACCTCC GCGCGCTCCTCGCCGTGCCCGACACCCACGAGGTGCTCTTCCTCCAGGGCGGCGCCACCT CCCAGTTCGCCGCCGCGCCGCTCAACCTCTGCGCCTCCCCCTCCGACCCCGCCGACTTCG TCGTCTCCGGGTCGTGGAGCGACAAGGCGTTCAAGGAGGCCAAGAAGTTCTCCGCCGCGT CCGTCGCCTGGTCCGGCAAGGACGGCAAGTACACCTCCCTCCCGCCCTTCGACGCCATCG AGCAGAACCCCGAGGCAAGGTTCCTCCACATCTGCTCCAACGAGACCATCCATGGCGTCG AGTTCAAGGACTACCCGGAGCCCAAGAACAAGTCGGGCATCCTCGTCGCCGACATGTCCT CCAACTTCTGCTCCAAGCCCGTCGACGTCTCCCGCTTCGGCCTCATCTACGCCGGCGCGC AGAAGAACGTCGGCCCCTCCGGCGTCACCATCGCCATCGTCCGCAAGGACCTCGTCGGCA GCGCGCAGCCCATCACCCCGGTGATGCTCGACTACAAGACGCACGCGGACAACGCCTCCC TGTACAACACCCCGCCGTGCTTCGCCATCTACATCTGCGGCCTCGTGTTCGAGGACCTGC TCGCGCAGGGCGGCCTCGCCGAGGTCGAGAAGAAGAACGCCCACAAGGCCGGCATCCTCT ACGACGCCATTGATGCCAGCGGCGGATACTACATCTGCCCCGTGGAGAAATCCGTGCGAT CGCTGATGAATGTGCCGTTCACCCTCGCCAAGGGTGGGGATTTTGAGAAGCAGTTCATCG CCGAGGCGGCCAAGGAGGGAATGGTGCAGCTCAAGGGGCACAGGTCGGTCGGCGGCGTGC GCGCCTCCATCTACAACGCCATGCCGCTCGCCGGTGTGGAGAAGCTCGTCGCGTTCATGA AGGATTTCCAAGCCAGGAACCCTTAATTTGACTCATGGTGGTTATGGTATTTTGATGCTG TCTTCAGTAGGAATGGTCTCTGTTCTTCATCATAGCATAATTAGGCTCCTTGCAAGAGCT GCTTTGCGCGTAAGAGATTTTCGATCCATCTGTTGTATCGGTACCAGTAACTATTTCGCG ATGCTGCTGCTACTGCTTTTCATGTGTTCATGGGATCTCATTCCCATTTTGTGCCATTGA ATGTTAGTATGGGAATAAAGGTAGATTCTTAGCTATCTGAGAGGAGTATATGCTGATGCT GATGCATAATAACAAGGTTGCTTGGTCTTCTTGTGTGATC