Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0157800-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:3103895:3109735:1 gene:Os03g0157800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0157800-01);Helicase and RNase D C-terminal, HRDC domain containing protein. (Os03t0157800-02);Non-protein coding transcript. (Os03t0157800-03)
Sequence	ATGGACGAGTTCAAAGGCCCAGGGGAGAAGGAGAAGGAGGAGGAGGCCGGGGACAAGGCC GCGGCGGAGGAGGCGGGGGACGGATTCCAGGTGGTGCGCGGTAAGAAGAAGAAGCGGCCC AATGGTGGTTCGGCTTCGGGTGCTGGGTCGGGGACGATGATGGCCAAGGACAAGGCGGCG GCGGCGGCGGCCGCGGAGCCGTGGACGAAGGCGAAGGTGTCTTTCCACGATCCCAACATT CCGCGGCCGCAGGATGTGTACGCAATCAGAGTGAACAACTACAACGTGCCGTTCGACCAT GTCTGGCTAGAGCGCACCGAAGATGGCAGCCGCCCTATCCACCCTCTGGAAAAACTGCCA ATGGAGCAGTTTATTGACAGAAATGTTCCTGAAAGTGAACCTGTAAAGCCAGCTGATTTG GAGGATACCCCATTTACGCTAGTTGAAGATAAGAATGGTTTAGCAGACTTAGCTAAAAAG TTGAAGAGTGTAAATGAATTTGCTGTTGACTTGGAGCACAATCAATATAGGTCATTTCAG GGTTTGACCTGCTTGATGCAGATTTCAACAAGAACAGAGGATTTTGTTGTAGACACCCTT AAACTTCGCATATACATTGGTCTCTACTTGAAAGAACATTTTAAAGATCCAACCAAGAGA AAGGTAATGCATGGGGCTGATCGTGATATTATGTGGCTCCAACGGGATTTCCACATATAT GTTTGCAATCTTTTTGACACAGGACAGGCTTCAAGGGTTTTACAGATGGAGCGAAACAGC CTAGAGCACCTATTGCGTCACTTTTGTGGAGTCACAGCAAATAAAGAATATCAAAACGCT GATTGGAGGTCAAGGCCACTTTCTGATGAAATGATAAAGTATGCTAGAGAAGATACACAC TATCTGTTGTATATGTATGACTTGATGAGGTTGAGACTGCAAAAGGAGTCGACATCTGAC AATGATCTTCTTCTAGAGGTGCAAAAGCGCAGTAATGAAATTTGTTTACAGTTGTATGAA AAGGAACTGCTGACAGATACATCTTATCTCCACATATACGGGTTGCAAGAACATGACCTG GATGCAAAACAGCTGGCTGTTGTATATGCTCTACATCAATGGAGAGATTATATAGCTCGT GAAGTAGATGAGAGCACTGGTTATGTGTTACCAAATAAGGCTTTAATTGAGATAGCAAAG AAGATGCCTACAGATACTGCAGAGTTAAAAAGAATGGTGAAATCAAAATATCCATTTGTT GATGAAAATCTGGACCAAGTCGTAGGCATCATATGGAATGCAACTGAATCTTCTTATGCC TTTGAAAGCAGAGCTGAACAACTAAAGAAGGAACGTCTGGAGCAGCTAACGGACAGGGTT CAGACTATATCATCACCTGAGATGAAGACATCTATGAACTTATCAGGCCAGATTAGATCA ATGGATAAGGAAATACTGAGCGATAACATACATCAGCAGGTGGCACAGGCTACTTTTCAA GAACTGAAGAGACCTATGGCTTTGGGAGCAGTAGGGAATTCAACATCCGGGGGACAGAGA GATTTCTTTGGAGGGTTTTCAAATAAGTCTGAGAAGATGGAGAAGGCTAAATCCTATCCA GCCTTTTACTACCCCCAGCTTCCACAATATAGCCCTGAAGTTGGGTACGGCTTTCAATCA ATAAACCGAACTATGGCGGGAACAGCACAGTCTCCTACTGGCAATAAGGAGAGGGATCTC CAGAACCCTAGAAGACGTCAATCTTTCCCACCTTCCGGTAACATAAGTGATACACACCAG TAA

Peptide Sequence

PEP ID	Os03t0157800-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:3103895:3109735:1 gene:Os03g0157800 transcript:Os03t0157800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0157800-01);Helicase and RNase D C-terminal, HRDC domain containing protein. (Os03t0157800-02);Non-protein coding transcript. (Os03t0157800-03)
Sequence	MDEFKGPGEKEKEEEAGDKAAAEEAGDGFQVVRGKKKKRPNGGSASGAGSGTMMAKDKAA AAAAAEPWTKAKVSFHDPNIPRPQDVYAIRVNNYNVPFDHVWLERTEDGSRPIHPLEKLP MEQFIDRNVPESEPVKPADLEDTPFTLVEDKNGLADLAKKLKSVNEFAVDLEHNQYRSFQ GLTCLMQISTRTEDFVVDTLKLRIYIGLYLKEHFKDPTKRKVMHGADRDIMWLQRDFHIY VCNLFDTGQASRVLQMERNSLEHLLRHFCGVTANKEYQNADWRSRPLSDEMIKYAREDTH YLLYMYDLMRLRLQKESTSDNDLLLEVQKRSNEICLQLYEKELLTDTSYLHIYGLQEHDL DAKQLAVVYALHQWRDYIAREVDESTGYVLPNKALIEIAKKMPTDTAELKRMVKSKYPFV DENLDQVVGIIWNATESSYAFESRAEQLKKERLEQLTDRVQTISSPEMKTSMNLSGQIRS MDKEILSDNIHQQVAQATFQELKRPMALGAVGNSTSGGQRDFFGGFSNKSEKMEKAKSYP AFYYPQLPQYSPEVGYGFQSINRTMAGTAQSPTGNKERDLQNPRRRQSFPPSGNISDTHQ

Transcript Sequence

Transcript ID	Os03t0157800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3103895:3109735:1 gene:Os03g0157800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0157800-01);Helicase and RNase D C-terminal, HRDC domain containing protein. (Os03t0157800-02);Non-protein coding transcript. (Os03t0157800-03)
Sequence	ATCCACCATTCCACCCACACGCCGAGCGCGAGGCGGAGGCGGCCGCGTCTATAAAACCAG AGGCGCGCCTCGCCGCGCCGCGCCGCGTTCTCTTCCTCCCCGGAGTAGAAACCGCCCGCC ATTTGGATCCCCCCAATTCCCCTCCTCGCCCAAAACCCTAGCCGCACCCCCGCCGCGCGC CCTCCGCCTCCGCCTCCGCCGCGGCGTGCGGGCTCCGTCGTCCGTCGGCTCCTCGCCACT GGCGTCGCGAGGCGTCGTCACCGGAGGTAGCGGGAGCTCAGGGGACACGATCTCGAAGGC GCGCGCCAGGACGAACAGCTCGAGCGCGCCGCGGGGGGCCTTCGGTTCTGAGATAAATCA CCCCGTCCGCATCATCGACGCCTCCCTCCCCGCGCTTGGCGCCAGCTCGTTCTAGGGGGG GAAGATCTCGGCGACGAGCAGCTTGGGCGCGTTCGCCTCGATGGACGAGTTCAAAGGCCC AGGGGAGAAGGAGAAGGAGGAGGAGGCCGGGGACAAGGCCGCGGCGGAGGAGGCGGGGGA CGGATTCCAGGTGGTGCGCGGTAAGAAGAAGAAGCGGCCCAATGGTGGTTCGGCTTCGGG TGCTGGGTCGGGGACGATGATGGCCAAGGACAAGGCGGCGGCGGCGGCGGCCGCGGAGCC GTGGACGAAGGCGAAGGTGTCTTTCCACGATCCCAACATTCCGCGGCCGCAGGATGTGTA CGCAATCAGAGTGAACAACTACAACGTGCCGTTCGACCATGTCTGGCTAGAGCGCACCGA AGATGGCAGCCGCCCTATCCACCCTCTGGAAAAACTGCCAATGGAGCAGTTTATTGACAG AAATGTTCCTGAAAGTGAACCTGTAAAGCCAGCTGATTTGGAGGATACCCCATTTACGCT AGTTGAAGATAAGAATGGTTTAGCAGACTTAGCTAAAAAGTTGAAGAGTGTAAATGAATT TGCTGTTGACTTGGAGCACAATCAATATAGGTCATTTCAGGGTTTGACCTGCTTGATGCA GATTTCAACAAGAACAGAGGATTTTGTTGTAGACACCCTTAAACTTCGCATATACATTGG TCTCTACTTGAAAGAACATTTTAAAGATCCAACCAAGAGAAAGGTAATGCATGGGGCTGA TCGTGATATTATGTGGCTCCAACGGGATTTCCACATATATGTTTGCAATCTTTTTGACAC AGGACAGGCTTCAAGGGTTTTACAGATGGAGCGAAACAGCCTAGAGCACCTATTGCGTCA CTTTTGTGGAGTCACAGCAAATAAAGAATATCAAAACGCTGATTGGAGGTCAAGGCCACT TTCTGATGAAATGATAAAGTATGCTAGAGAAGATACACACTATCTGTTGTATATGTATGA CTTGATGAGGTTGAGACTGCAAAAGGAGTCGACATCTGACAATGATCTTCTTCTAGAGGT GCAAAAGCGCAGTAATGAAATTTGTTTACAGTTGTATGAAAAGGAACTGCTGACAGATAC ATCTTATCTCCACATATACGGGTTGCAAGAACATGACCTGGATGCAAAACAGCTGGCTGT TGTATATGCTCTACATCAATGGAGAGATTATATAGCTCGTGAAGTAGATGAGAGCACTGG TTATGTGTTACCAAATAAGGCTTTAATTGAGATAGCAAAGAAGATGCCTACAGATACTGC AGAGTTAAAAAGAATGGTGAAATCAAAATATCCATTTGTTGATGAAAATCTGGACCAAGT CGTAGGCATCATATGGAATGCAACTGAATCTTCTTATGCCTTTGAAAGCAGAGCTGAACA ACTAAAGAAGGAACGTCTGGAGCAGCTAACGGACAGGGTTCAGACTATATCATCACCTGA GATGAAGACATCTATGAACTTATCAGGCCAGATTAGATCAATGGATAAGGAAATACTGAG CGATAACATACATCAGCAGGTGGCACAGGCTACTTTTCAAGAACTGAAGAGACCTATGGC TTTGGGAGCAGTAGGGAATTCAACATCCGGGGGACAGAGAGATTTCTTTGGAGGGTTTTC AAATAAGTCTGAGAAGATGGAGAAGGCTAAATCCTATCCAGCCTTTTACTACCCCCAGCT TCCACAATATAGCCCTGAAGTTGGGTACGGCTTTCAATCAATAAACCGAACTATGGCGGG AACAGCACAGTCTCCTACTGGCAATAAGGAGAGGGATCTCCAGAACCCTAGAAGACGTCA ATCTTTCCCACCTTCCGGTAACATAAGTGATACACACCAGTAATTGCTCTGATGTATGCC TTCAAATTCATCCTTCTGTGCAGAAAATAGCTGTAGAGAAATGGAAACTGGGCTGTTTTT ATCCGTGCCCCCTAATATGAGAAACTATGCCTCCCTCAGATTTTTTTGGCTAGACTAACA GAAATATGAGAATAGCCCATATCATTGACATTAGATGCAGAGCATGGGAAATGCCAATGT GGATTGGCTTGTGTGTAACAACTGACAAACATGTGCTGTGCAATTGTGAATACTGGAGTT GTACAAGTGGTATACTGTAATACTGTTATAGCATAGCATCAGAATACAAAGACAGAAATG AAC