Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0157600-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:3096030:3096880:-1 gene:Os03g0157600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein Hsp20 domain containing protein. (Os03t0157600-00)
Sequence

ATGGCCGCCGCCGCTGCTGCCGCCACCTCGCCGCGCAACTACACCGACTTCGTTCCGCCG
CACCAGCTGGTCGAGGAGGCCGGCAAGAAGGCAAGAGCATTATTCCTTCCCACCTCTTCG
CTTATGAGCCGCAACAAAATTAAATTTCAATTTTGGGAACTGCAGTTTGATTTTAGAGGG
TTCAAGAAGGAGCAGCTGAGAGTGCAGATCGACAACCACGGGAAGCTGCGGATAAGCGGC
GAGCGGCAGGTCTCCGGCAACCGGTGGAGCCGCTTCCACAAGGATTTCCAGGTCCCCGAT
GACTGCAACGCCGGCGACGTCCGCGCCAGGTTCGACTCCAGGGACCGCGTCCTCCACATC
ACCATGCCCAAGCTGTCGCCGGCGGAAGAGGAGCCCAAGGCCGCCGCCGCCGCCGCACCC
GCCGATCATGGCGCCGCGCAGGCGCAGCAAACCGCTGCACCAGCAGATCAAGAGAAGGAG
GACAAGGAAGAAGAAGATGACGATGGCGCGGCCAACGACGGGGCGGCGGCGGGTGGCACC
GCCTTGGTGACCGGCCGGAGGAAGACGCCGTGGAGGGTGGTCCTCGCCGTCGTGCTGGCG
TTGGTGGCCGCCGCCGGCTTCTACGCCAAGTACAGGCTGATGATGGATCCGTCGGCGGCG
GACGGCGGACATGGTCTCATCGGCTTCTCCGACCATTGA

Peptide Sequence

PEP ID

Os03t0157600-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:3096030:3096880:-1 gene:Os03g0157600 transcript:Os03t0157600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein Hsp20 domain containing protein. (Os03t0157600-00)
Sequence

MAAAAAAATSPRNYTDFVPPHQLVEEAGKKARALFLPTSSLMSRNKIKFQFWELQFDFRG
FKKEQLRVQIDNHGKLRISGERQVSGNRWSRFHKDFQVPDDCNAGDVRARFDSRDRVLHI
TMPKLSPAEEEPKAAAAAAPADHGAAQAQQTAAPADQEKEDKEEEDDDGAANDGAAAGGT
ALVTGRRKTPWRVVLAVVLALVAAAGFYAKYRLMMDPSAADGGHGLIGFSDH

Transcript Sequence

Transcript ID

Os03t0157600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3096030:3096880:-1 gene:Os03g0157600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein Hsp20 domain containing protein. (Os03t0157600-00)
Sequence

ATGGCCGCCGCCGCTGCTGCCGCCACCTCGCCGCGCAACTACACCGACTTCGTTCCGCCG
CACCAGCTGGTCGAGGAGGCCGGCAAGAAGGCAAGAGCATTATTCCTTCCCACCTCTTCG
CTTATGAGCCGCAACAAAATTAAATTTCAATTTTGGGAACTGCAGTTTGATTTTAGAGGG
TTCAAGAAGGAGCAGCTGAGAGTGCAGATCGACAACCACGGGAAGCTGCGGATAAGCGGC
GAGCGGCAGGTCTCCGGCAACCGGTGGAGCCGCTTCCACAAGGATTTCCAGGTCCCCGAT
GACTGCAACGCCGGCGACGTCCGCGCCAGGTTCGACTCCAGGGACCGCGTCCTCCACATC
ACCATGCCCAAGCTGTCGCCGGCGGAAGAGGAGCCCAAGGCCGCCGCCGCCGCCGCACCC
GCCGATCATGGCGCCGCGCAGGCGCAGCAAACCGCTGCACCAGCAGATCAAGAGAAGGAG
GACAAGGAAGAAGAAGATGACGATGGCGCGGCCAACGACGGGGCGGCGGCGGGTGGCACC
GCCTTGGTGACCGGCCGGAGGAAGACGCCGTGGAGGGTGGTCCTCGCCGTCGTGCTGGCG
TTGGTGGCCGCCGCCGGCTTCTACGCCAAGTACAGGCTGATGATGGATCCGTCGGCGGCG
GACGGCGGACATGGTCTCATCGGCTTCTCCGACCATTGA