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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0156000-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:3026522:3027521:1 gene:Os03g0156000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-EXPANSIN 19 description:Alpha-expansin OsEXPA19. (Os03t0156000-00)
Sequence

ATGGGGAACATTTTCCTGCAGCTGCTCGCCGTTGTTGCACTCTGCATTGCACCGGCGAGG
TCGGACTGGCTCCCGGGCACCGCCACGTTCTACGGCGGCGCCGACGGCTCCGGCACCATG
GGTGGTGCGTGCGGGTACGGGAACCTGTACGACCAGGGGTACGGCATCAACAACGCAGCG
CTGAGCACGCCGCTGTTCAACGACGGCGCGTCGTGCGGGCAGTGCTACCTCATCATCTGC
GACTACAGCAAGGCGCCCGACTGGTGCAAGCTCGGCAAGGCGATCACCGTGACGGGCACC
AACTACTGTCCGCCCAACTATGACCTCCCATACGGCGGCTGGTGCAACGCTACCCGCCCT
CACTTCGACATGTCCCAACCTGCCTGGGAGAACATTGGCATCTACAACGCCGGCATCATC
CCCATCCTCTACCAACAGGTGAAGTGCTGGAGGTACGGGGGCGTGAGGTTCACCATCAAC
GGGTTCAACTACTTCGAGCTGGTGCTGGTGACCAACATGGCCGGGAGCGGGTCGATCGCG
AGCATGTCGGTGAAGGGGTCATGCACGGGGTGGATCCAGATGACGAGGAATTGGGGCGCC
AATTGGCAGTGTCTCGCTGGACTGGCCGGACAGGCGCTCAGCTTCAATGTCACCTCCACC
GGCGGCCAGACCATCGTCTTCGACGATGCCGTGCCGGCGGGGTGGTCGTTCGGCCAAACA
TTCAGCACCTACCACCAATTCGACTACTAA

Peptide Sequence

PEP ID

Os03t0156000-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:3026522:3027521:1 gene:Os03g0156000 transcript:Os03t0156000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-EXPANSIN 19 description:Alpha-expansin OsEXPA19. (Os03t0156000-00)
Sequence

MGNIFLQLLAVVALCIAPARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAA
LSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPYGGWCNATRP
HFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIA
SMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQT
FSTYHQFDY

Transcript Sequence

Transcript ID

Os03t0156000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3026522:3027521:1 gene:Os03g0156000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-EXPANSIN 19 description:Alpha-expansin OsEXPA19. (Os03t0156000-00)
Sequence

CTAGCTAAGAGGAAATGGGGAACATTTTCCTGCAGCTGCTCGCCGTTGTTGCACTCTGCA
TTGCACCGGCGAGGTCGGACTGGCTCCCGGGCACCGCCACGTTCTACGGCGGCGCCGACG
GCTCCGGCACCATGGGTGGTGCGTGCGGGTACGGGAACCTGTACGACCAGGGGTACGGCA
TCAACAACGCAGCGCTGAGCACGCCGCTGTTCAACGACGGCGCGTCGTGCGGGCAGTGCT
ACCTCATCATCTGCGACTACAGCAAGGCGCCCGACTGGTGCAAGCTCGGCAAGGCGATCA
CCGTGACGGGCACCAACTACTGTCCGCCCAACTATGACCTCCCATACGGCGGCTGGTGCA
ACGCTACCCGCCCTCACTTCGACATGTCCCAACCTGCCTGGGAGAACATTGGCATCTACA
ACGCCGGCATCATCCCCATCCTCTACCAACAGGTGAAGTGCTGGAGGTACGGGGGCGTGA
GGTTCACCATCAACGGGTTCAACTACTTCGAGCTGGTGCTGGTGACCAACATGGCCGGGA
GCGGGTCGATCGCGAGCATGTCGGTGAAGGGGTCATGCACGGGGTGGATCCAGATGACGA
GGAATTGGGGCGCCAATTGGCAGTGTCTCGCTGGACTGGCCGGACAGGCGCTCAGCTTCA
ATGTCACCTCCACCGGCGGCCAGACCATCGTCTTCGACGATGCCGTGCCGGCGGGGTGGT
CGTTCGGCCAAACATTCAGCACCTACCACCAATTCGACTACTAAGCAGGGTTCAGACG