Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0152800-03
CDS Infomation

cds chromosome:IRGSP-1.0:3:2909533:2912610:1 gene:Os03g0152800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0152800-01);Hypothetical conserved gene. (Os03t0152800-02);Similar to predicted protein. (Os03t0152800-03)
Sequence

TTGCAAGTGAATGTTGGTGTTAACAAAATGGAAGCTCCAGTGCTAGAAGTTCTTCAATTT
GAGAAATCTTCATCAAGCAATTATATAACCAAGAATCTGGTCAATGGACTTTCTAGTGGT
GATGAGGATCCATGTCAGGAGCTGCTAAGCTGGCTGCTCCCTTTGGATCGCACACTTCCT
CCGCGATCCTTATCACCTCCTACTCTCAATCCTAGTGCATCACACAAGCAATCTTATTCT
GCTTCTGGTTCTCAAATTTTTTCATTAAGTCACTTCAGAAGCTATTCCATGCCTTCAGCC
TCCTCCACTCAACCACCCAACATTAGGCCACCACCAATTTCTGAAAGTCAAGAATTTGTG
CCTGAAAAGCCTGCGAAAACACCTGATATTATAAATGATGGACAACTTTCCTTTAGAGGA
GTTCCATTGGAGCCTGAACGGTATTCCGTACGTTGTGGTCTAGAAGGTGTATATCTACCA
GGGAAAAGATGGCGGAGAAAAGTTGAGATCATTCAACCAATTGAGGTTCACTCTTTTGCC
GCAAAATGTACTTCGGAAAATCTTCTGTGTGTTCTAATCAAGAATATTTCTCCACAGCAT
GTGAAAGATATAGTTGTATTGGTAGATGCAATTACAATTGTCTTTGAGGAGGCATCCAAA
GGAGGTGCTCCTTTGTCACTCCCAATTGCCAGTATTGAGGTTGGGCACGGGCATAGCTTA
CCAAATCTTGCACTCAGGAGAGGCGAGGAGCACTCTTTTATTCTCAAGCCAGCAACTATG
TCGTTTAGGGACCGGAGGACCAACAATGATGCACCTCTGACTTTGTCACTCCCTAAGATG
AATGGAACTGCCACAAATGTTTCTTTGGCTAAGGTTGGCGAGACCATTGGCTCTCTTATG
GATCAGTATGCTGTACTTGTATCATATCGCTGCAATTACACAGAATCAAAACTTTTCTTC
AAGCAGGCCACCAGCTGGCGACCCTGTGTTGCTAGTGACCTTATGATCTCTGTATCATCA
GAACTGTCTTTGCGAAATCCTATTTCGAGTGCTCGAGTTCCTCAACTCCCAGTGCAGGTC
TTAACCCTTGAGGCTACTAATATGACATCAGAAAACCTTACCGTAACGGTTCTTGCTCCA
GAAGCGTCTGGTTCTTCTTCAGTTGTATCCTTGAACTCAGCTCCAACCACACCAAATAGT
TCGTATGACAATCTTAATGAGTCTGTGAGAAGATCTGGCTTGGGTAAACATCGAGCTGGT
TTTCGAAGAATGAATTCAGTCCTTGCTGGCTCACCAAAAGAAAGTGACAATGGAGGAAAT
AGAATTAGCACTTCTGGAGGCTGTACTCATCTGTGGTTGCAGAGTGCGGTTCCTTTAGGG
TGTATTCCTGCACGTTCAAGCACCACCGTCAAGCTTGAGCTACTTCCATTAACGGATGGG
ATCATTACACTGGATACACTTCAAATAACGATAAGGGAGAAAGGTCTTACATACATACCA
GAGCACTCCTTGGAGATATATGCGTCAGCTGCCAATTCAACGGGAAGTTCATAG

Peptide Sequence

PEP ID

Os03t0152800-03
PEP Infomation

pep chromosome:IRGSP-1.0:3:2909533:2912610:1 gene:Os03g0152800 transcript:Os03t0152800-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0152800-01);Hypothetical conserved gene. (Os03t0152800-02);Similar to predicted protein. (Os03t0152800-03)
Sequence

LQVNVGVNKMEAPVLEVLQFEKSSSSNYITKNLVNGLSSGDEDPCQELLSWLLPLDRTLP
PRSLSPPTLNPSASHKQSYSASGSQIFSLSHFRSYSMPSASSTQPPNIRPPPISESQEFV
PEKPAKTPDIINDGQLSFRGVPLEPERYSVRCGLEGVYLPGKRWRRKVEIIQPIEVHSFA
AKCTSENLLCVLIKNISPQHVKDIVVLVDAITIVFEEASKGGAPLSLPIASIEVGHGHSL
PNLALRRGEEHSFILKPATMSFRDRRTNNDAPLTLSLPKMNGTATNVSLAKVGETIGSLM
DQYAVLVSYRCNYTESKLFFKQATSWRPCVASDLMISVSSELSLRNPISSARVPQLPVQV
LTLEATNMTSENLTVTVLAPEASGSSSVVSLNSAPTTPNSSYDNLNESVRRSGLGKHRAG
FRRMNSVLAGSPKESDNGGNRISTSGGCTHLWLQSAVPLGCIPARSSTTVKLELLPLTDG
IITLDTLQITIREKGLTYIPEHSLEIYASAANSTGSS

Transcript Sequence

Transcript ID

Os03t0152800-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:2909533:2912610:1 gene:Os03g0152800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0152800-01);Hypothetical conserved gene. (Os03t0152800-02);Similar to predicted protein. (Os03t0152800-03)
Sequence

TTTGCAAGTGAATGTTGGTGTTAACAAAATGGAAGCTCCAGTGCTAGAAGTTCTTCAATT
TGAGAAATCTTCATCAAGCAATTATATAACCAAGAATCTGGTCAATGGACTTTCTAGTGG
TGATGAGGATCCATGTCAGGAGCTGCTAAGCTGGCTGCTCCCTTTGGATCGCACACTTCC
TCCGCGATCCTTATCACCTCCTACTCTCAATCCTAGTGCATCACACAAGCAATCTTATTC
TGCTTCTGGTTCTCAAATTTTTTCATTAAGTCACTTCAGAAGCTATTCCATGCCTTCAGC
CTCCTCCACTCAACCACCCAACATTAGGCCACCACCAATTTCTGAAAGTCAAGAATTTGT
GCCTGAAAAGCCTGCGAAAACACCTGATATTATAAATGATGGACAACTTTCCTTTAGAGG
AGTTCCATTGGAGCCTGAACGGTATTCCGTACGTTGTGGTCTAGAAGGTGTATATCTACC
AGGGAAAAGATGGCGGAGAAAAGTTGAGATCATTCAACCAATTGAGGTTCACTCTTTTGC
CGCAAAATGTACTTCGGAAAATCTTCTGTGTGTTCTAATCAAGAATATTTCTCCACAGCA
TGTGAAAGATATAGTTGTATTGGTAGATGCAATTACAATTGTCTTTGAGGAGGCATCCAA
AGGAGGTGCTCCTTTGTCACTCCCAATTGCCAGTATTGAGGTTGGGCACGGGCATAGCTT
ACCAAATCTTGCACTCAGGAGAGGCGAGGAGCACTCTTTTATTCTCAAGCCAGCAACTAT
GTCGTTTAGGGACCGGAGGACCAACAATGATGCACCTCTGACTTTGTCACTCCCTAAGAT
GAATGGAACTGCCACAAATGTTTCTTTGGCTAAGGTTGGCGAGACCATTGGCTCTCTTAT
GGATCAGTATGCTGTACTTGTATCATATCGCTGCAATTACACAGAATCAAAACTTTTCTT
CAAGCAGGCCACCAGCTGGCGACCCTGTGTTGCTAGTGACCTTATGATCTCTGTATCATC
AGAACTGTCTTTGCGAAATCCTATTTCGAGTGCTCGAGTTCCTCAACTCCCAGTGCAGGT
CTTAACCCTTGAGGCTACTAATATGACATCAGAAAACCTTACCGTAACGGTTCTTGCTCC
AGAAGCGTCTGGTTCTTCTTCAGTTGTATCCTTGAACTCAGCTCCAACCACACCAAATAG
TTCGTATGACAATCTTAATGAGTCTGTGAGAAGATCTGGCTTGGGTAAACATCGAGCTGG
TTTTCGAAGAATGAATTCAGTCCTTGCTGGCTCACCAAAAGAAAGTGACAATGGAGGAAA
TAGAATTAGCACTTCTGGAGGCTGTACTCATCTGTGGTTGCAGAGTGCGGTTCCTTTAGG
GTGTATTCCTGCACGTTCAAGCACCACCGTCAAGCTTGAGCTACTTCCATTAACGGATGG
GATCATTACACTGGATACACTTCAAATAACGATAAGGGAGAAAGGTCTTACATACATACC
AGAGCACTCCTTGGAGATATATGCGTCAGCTGCCAATTCAACGGGAAGTTCATAGAGTCA
ATATCAGAGTGTCAAATGGTGCAATTACTGTCTTGGTGAATTGGGGTCTGGGGTCTCAAC
CTCTGCGCAGAGTGTGAGGTCACTGGATCAAGTGTATTGTTGCTCATTTGTATCCGATTT
TTGACGTAGAAGCTCCTACAGCACGATCTCGAAGCCAAATAACGCTATTTGTACGTGGGA
AGGATTTTGCTGCCTACAGTGGAGAAATGGGCACAATGATCTGTCTATAGACTATAAATT
GGGTTTCCAAATCCATTCATACACGGGGGTTGCTGAGCTGCTAGTGTTGTCTATACAGGC
TCATCGAAAATCTGTAATGTTTGTGTTGCATAGTTCAGATTCCATTTTTGTGGTGTTCAT
TTTTGTTCCGTGTAAACCTGGACAGTGCCCATCTTTTGTTCGACAATCGACAGGCAGATG
TATCATGCATATGGTGTAGCGAGGAAGGAGAAATTCGCAGATGT