Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0152400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:2883005:2887887:-1 gene:Os03g0152400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 1 description:Similar to 4-coumarate--CoA ligase-like 1. (Os03t0152400-01)
Sequence	ATGGCGAGCGCGTCGGTGCCGGCCGCCGGCTACGGCGCGGACGGCGTGTACCGCTCGCTG CGCCCGCCCGCGCCCGTCGCGTCCGACCCGGGCCTCTCCCTCACCGACCTCCTCCTCCGC CGCGCCGACGCCTGCCCCTCCGCGGTCGCGCTCGCCGACGCGGCCGCCGGCGGCCGCGCC CTCACCTTCGCGGAGCTGAGGTCGGCCGTCCTCTCCACCGCCGTCGCGCTCTCCTCCCGC GCGGGCGTGCGACCCGGCGACGCCGTGCTCCTCCTCGCGCCCAACTGCGTGCTCTACCCG GTCTGCTTCTTCGCCGTCACCGCCCTCGGCGCCGTCGGCACCACCGTCAACCCGGACTAC ACCCCGCGGGAGATCGCCAAGCAGGTCTCCGACGCGCGCGCCAAGCTCGTCATCACCATC TCCGCCCTGGTGCCCAAGATTGCGGGGCTCCGCCTCCCCGTCATCCTCCTCGACGACGAC GCGAACGCCGCGGCCGCCTCCTTGCCTCCGGACGCCACCGTCACGCTCTACACCAACCTC GTCGCCGGCGTGAAGGAGGCGGATTACCGCCGCCCACCAATCAAGCAGAGCGACACGGCG GCTCTCCTCTACTCGTCGGGCACGACGGGGGATAGCAAGGGCGTCATCCTGACGCACCGC AACTTCATCGCCGCGGCGAGGATGGTGACCTCCGACCAAGACGAGCGCCGGGAGGGGCCC AACGTGTTCCTCTGCTTCCTCCCCATGTTCCACATCTTCGGCCTGTCCGTCATCACGTAC GCGCAGCTGCATCGCGGGAACGCCATCATCGCCATGTCGCGGTTCGACATCAACTCCCTG ATGGAGGCCGTGCAGAGGCACCGCGTCACGCACCTGTTCTGCGTGCCGCCGGTCATTATC GCGCTCGCCAAGCACGGGAAGGCCGGTAAGTACGATCTCAGCTCTCTCAAGTTCATCGGC TCCGGCGCCGCGCCGCTCGGCAAGGATGTGATGGAGGTCGTGGCCAAGAAATTCCCGGAC AGTGAGATTGTTCAGGGTTATGGTATGACTGAGACTTGTGGAATCATATCGCTCGAGTAC CCAGAAAAAGGACAGGCTCGTGAATTTGGGTCAACTGGCACGCTTGTCTCAGGAGTTGAG GCAAAGATTGTCGACATAAAGACATTAAAACATCTACCGCCCAATCAAGTAGGAGAAATT TGTGTTCGAGGGCCAAATGTAATGCAAGGGTATTTCAACAATGTGCAAGCTACTGAATTT ACAATCAAGCAAGGGTGGTTGCACACTGGTGATCTTGGATACTTCGACGGAGGAGGCCAG CTTTTTGTTGTTGATAGACTTAAAGAACTGATTAAGTACAAAGGTTTCCAGATTGCACCT GCCGAGCTTGAAGGGTTACTTCTATCTCATCCAGAGATTCTAGATGCTGTTGTTATCCCG TTTCCTGATGCTAAAGCTGGGGAGGTTCCCATTGCCTATGTTGTTCGGTCACCTGACAGT TCATTGACAGAAGTTGATGTCCAAAAATTTATTGAAAAACAGGTGGCGTACTACAAAAGA TTGAAGAGAGTTACCTTTGTGGGCAGCGTGCCCAAATCAGCTTCAGGAAAGATTCTGAGA AGGCAGCTTATCGCCCAAGTGAGATCATCCAAGTTGTAG

Peptide Sequence

PEP ID	Os03t0152400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:2883005:2887887:-1 gene:Os03g0152400 transcript:Os03t0152400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 1 description:Similar to 4-coumarate--CoA ligase-like 1. (Os03t0152400-01)
Sequence	MASASVPAAGYGADGVYRSLRPPAPVASDPGLSLTDLLLRRADACPSAVALADAAAGGRA LTFAELRSAVLSTAVALSSRAGVRPGDAVLLLAPNCVLYPVCFFAVTALGAVGTTVNPDY TPREIAKQVSDARAKLVITISALVPKIAGLRLPVILLDDDANAAAASLPPDATVTLYTNL VAGVKEADYRRPPIKQSDTAALLYSSGTTGDSKGVILTHRNFIAAARMVTSDQDERREGP NVFLCFLPMFHIFGLSVITYAQLHRGNAIIAMSRFDINSLMEAVQRHRVTHLFCVPPVII ALAKHGKAGKYDLSSLKFIGSGAAPLGKDVMEVVAKKFPDSEIVQGYGMTETCGIISLEY PEKGQAREFGSTGTLVSGVEAKIVDIKTLKHLPPNQVGEICVRGPNVMQGYFNNVQATEF TIKQGWLHTGDLGYFDGGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIP FPDAKAGEVPIAYVVRSPDSSLTEVDVQKFIEKQVAYYKRLKRVTFVGSVPKSASGKILR RQLIAQVRSSKL

Transcript Sequence

Transcript ID	Os03t0152400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:2883005:2887887:-1 gene:Os03g0152400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 1 description:Similar to 4-coumarate--CoA ligase-like 1. (Os03t0152400-01)
Sequence	AAACCCAAGAGGCGGGGGAAGCCATGGCGAGCGCGTCGGTGCCGGCCGCCGGCTACGGCG CGGACGGCGTGTACCGCTCGCTGCGCCCGCCCGCGCCCGTCGCGTCCGACCCGGGCCTCT CCCTCACCGACCTCCTCCTCCGCCGCGCCGACGCCTGCCCCTCCGCGGTCGCGCTCGCCG ACGCGGCCGCCGGCGGCCGCGCCCTCACCTTCGCGGAGCTGAGGTCGGCCGTCCTCTCCA CCGCCGTCGCGCTCTCCTCCCGCGCGGGCGTGCGACCCGGCGACGCCGTGCTCCTCCTCG CGCCCAACTGCGTGCTCTACCCGGTCTGCTTCTTCGCCGTCACCGCCCTCGGCGCCGTCG GCACCACCGTCAACCCGGACTACACCCCGCGGGAGATCGCCAAGCAGGTCTCCGACGCGC GCGCCAAGCTCGTCATCACCATCTCCGCCCTGGTGCCCAAGATTGCGGGGCTCCGCCTCC CCGTCATCCTCCTCGACGACGACGCGAACGCCGCGGCCGCCTCCTTGCCTCCGGACGCCA CCGTCACGCTCTACACCAACCTCGTCGCCGGCGTGAAGGAGGCGGATTACCGCCGCCCAC CAATCAAGCAGAGCGACACGGCGGCTCTCCTCTACTCGTCGGGCACGACGGGGGATAGCA AGGGCGTCATCCTGACGCACCGCAACTTCATCGCCGCGGCGAGGATGGTGACCTCCGACC AAGACGAGCGCCGGGAGGGGCCCAACGTGTTCCTCTGCTTCCTCCCCATGTTCCACATCT TCGGCCTGTCCGTCATCACGTACGCGCAGCTGCATCGCGGGAACGCCATCATCGCCATGT CGCGGTTCGACATCAACTCCCTGATGGAGGCCGTGCAGAGGCACCGCGTCACGCACCTGT TCTGCGTGCCGCCGGTCATTATCGCGCTCGCCAAGCACGGGAAGGCCGGTAAGTACGATC TCAGCTCTCTCAAGTTCATCGGCTCCGGCGCCGCGCCGCTCGGCAAGGATGTGATGGAGG TCGTGGCCAAGAAATTCCCGGACAGTGAGATTGTTCAGGGTTATGGTATGACTGAGACTT GTGGAATCATATCGCTCGAGTACCCAGAAAAAGGACAGGCTCGTGAATTTGGGTCAACTG GCACGCTTGTCTCAGGAGTTGAGGCAAAGATTGTCGACATAAAGACATTAAAACATCTAC CGCCCAATCAAGTAGGAGAAATTTGTGTTCGAGGGCCAAATGTAATGCAAGGGTATTTCA ACAATGTGCAAGCTACTGAATTTACAATCAAGCAAGGGTGGTTGCACACTGGTGATCTTG GATACTTCGACGGAGGAGGCCAGCTTTTTGTTGTTGATAGACTTAAAGAACTGATTAAGT ACAAAGGTTTCCAGATTGCACCTGCCGAGCTTGAAGGGTTACTTCTATCTCATCCAGAGA TTCTAGATGCTGTTGTTATCCCGTTTCCTGATGCTAAAGCTGGGGAGGTTCCCATTGCCT ATGTTGTTCGGTCACCTGACAGTTCATTGACAGAAGTTGATGTCCAAAAATTTATTGAAA AACAGGTGGCGTACTACAAAAGATTGAAGAGAGTTACCTTTGTGGGCAGCGTGCCCAAAT CAGCTTCAGGAAAGATTCTGAGAAGGCAGCTTATCGCCCAAGTGAGATCATCCAAGTTGT AGCAAATTAATCTGCTTCTCTTTGGGAATCAATCGTGCTTATGTTTTGCCTTGATTCAGC CATTTTCAAAACTTGTCCGCGAAGGTTTATGTAGCATTGTGAAGACCACGTGAATGTATG ATGTATCAGAATGGAACCCCCATACTGTGCATTATAATAATGGAACATAAATGCCAATTT CAAGATAACATACTCTGGAAAGGATATAGTACTAAAGAAAAAAAAAGCTCTGAC