Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0152000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:2866379:2868145:-1 gene:Os03g0152000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os03t0152000-01)
Sequence

ATGGGGGATGAGAAGGCTGCTCCGAAGGCGGGCGCCACCGCCGACCCGGTGGTGCTGAGG
ATGGAGTTGCATTGCGCCGGCTGCGCGCAGAAGGTCAAGAAGTCCATCAAGCACTTGGCC
GGGGTGGAGTCGGTGGCGGCGGACGTGGCGACGAACACGGTCGTCGTGGCGGGGACGGCC
GAAGCGGCCGCGCTCAAGGCGAGGATCGAGGCGAAGACCAAGAAGCCCGTCGAGGTTGTC
TCCGCCGGCGGCGGTGGCGCCGCCGCCAAGAAACCCGCCGCCGAGCCCAAGGCCGTCAAG
GACGATGGCGGCGAGAAGAAGGACGCCCAGGCGAAAGAGGAGAAGGGGAAGAAGCAACCG
CCAGAGGAGAAGAAACCCAAAGAGGAAACGGTGCTGCTCAGGATTCGCCTCCACTGCGAT
GGCTGCGCCGACCGCATCAGGCGACGCATCTACAAGATCAAAGGGGTGAAGGAAGTGGTA
ATGGACGGCAATGCCAAGGATGAGGTGAAGGTGTCGGGCACAATGGACGTGCCGGCCATG
CTGACCTATCTCACCGAGAAGCTCAACCGCGCCGTGGAGGCCGTGGCGCCCGGCAGCAAG
AAAGACGAGAAGAAGAAGGACAAGGGCGGTGACGCCGACGGCGGCGAGAAGAAGAAAGAC
GCCGCCGGCGGCGACAAGAAGGACAAAGGCAAGAGCATCGAGGTCGCCGGCCCGTCCACC
GCCGCCGCCGCGGCGTCCATGGCGCCGGCGCCGGCCGAGGCGAGCACGTACCACGTCTCG
CCGTACGGCCACGGCTACTTCGCGTACCCGCAGCAGCAGGGACCTCCCCCCAGCTACTAC
CAGTACTACGGCGGCGGCAATGGCGACGGCGTGGGCTACGCCAACCCCAATGCCGGCGGC
GCCGGCGGCTACTACCACCCCCACCCCAACGACGTCCCTACCTACCAGCCGCCGCCGTCG
TACCCGCCGTACCCCTACCAGCTCGACATGTCGCCGGCGCCGCAGCTGTTCAGCGACGAG
AACCCCAACGCCTGCTCGGTGATGTGA

Peptide Sequence

PEP ID

Os03t0152000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:2866379:2868145:-1 gene:Os03g0152000 transcript:Os03t0152000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os03t0152000-01)
Sequence

MGDEKAAPKAGATADPVVLRMELHCAGCAQKVKKSIKHLAGVESVAADVATNTVVVAGTA
EAAALKARIEAKTKKPVEVVSAGGGGAAAKKPAAEPKAVKDDGGEKKDAQAKEEKGKKQP
PEEKKPKEETVLLRIRLHCDGCADRIRRRIYKIKGVKEVVMDGNAKDEVKVSGTMDVPAM
LTYLTEKLNRAVEAVAPGSKKDEKKKDKGGDADGGEKKKDAAGGDKKDKGKSIEVAGPST
AAAAASMAPAPAEASTYHVSPYGHGYFAYPQQQGPPPSYYQYYGGGNGDGVGYANPNAGG
AGGYYHPHPNDVPTYQPPPSYPPYPYQLDMSPAPQLFSDENPNACSVM

Transcript Sequence

Transcript ID

Os03t0152000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:2866379:2868145:-1 gene:Os03g0152000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os03t0152000-01)
Sequence

GTCAGAACTCAAAATCTCAAATTCCAGACTTCCAGAGGCGAGCACAGGAGGAGGTTGGAA
AAATCCATCCATGGGGGATGAGAAGGCTGCTCCGAAGGCGGGCGCCACCGCCGACCCGGT
GGTGCTGAGGATGGAGTTGCATTGCGCCGGCTGCGCGCAGAAGGTCAAGAAGTCCATCAA
GCACTTGGCCGGGGTGGAGTCGGTGGCGGCGGACGTGGCGACGAACACGGTCGTCGTGGC
GGGGACGGCCGAAGCGGCCGCGCTCAAGGCGAGGATCGAGGCGAAGACCAAGAAGCCCGT
CGAGGTTGTCTCCGCCGGCGGCGGTGGCGCCGCCGCCAAGAAACCCGCCGCCGAGCCCAA
GGCCGTCAAGGACGATGGCGGCGAGAAGAAGGACGCCCAGGCGAAAGAGGAGAAGGGGAA
GAAGCAACCGCCAGAGGAGAAGAAACCCAAAGAGGAAACGGTGCTGCTCAGGATTCGCCT
CCACTGCGATGGCTGCGCCGACCGCATCAGGCGACGCATCTACAAGATCAAAGGGGTGAA
GGAAGTGGTAATGGACGGCAATGCCAAGGATGAGGTGAAGGTGTCGGGCACAATGGACGT
GCCGGCCATGCTGACCTATCTCACCGAGAAGCTCAACCGCGCCGTGGAGGCCGTGGCGCC
CGGCAGCAAGAAAGACGAGAAGAAGAAGGACAAGGGCGGTGACGCCGACGGCGGCGAGAA
GAAGAAAGACGCCGCCGGCGGCGACAAGAAGGACAAAGGCAAGAGCATCGAGGTCGCCGG
CCCGTCCACCGCCGCCGCCGCGGCGTCCATGGCGCCGGCGCCGGCCGAGGCGAGCACGTA
CCACGTCTCGCCGTACGGCCACGGCTACTTCGCGTACCCGCAGCAGCAGGGACCTCCCCC
CAGCTACTACCAGTACTACGGCGGCGGCAATGGCGACGGCGTGGGCTACGCCAACCCCAA
TGCCGGCGGCGCCGGCGGCTACTACCACCCCCACCCCAACGACGTCCCTACCTACCAGCC
GCCGCCGTCGTACCCGCCGTACCCCTACCAGCTCGACATGTCGCCGGCGCCGCAGCTGTT
CAGCGACGAGAACCCCAACGCCTGCTCGGTGATGTGATCGCCATGTCTCCGGCGACAGAG
CTCAGAGGCCAATCTGACGACATGTACATACCGAGGACTTTAGACTTAGAAGATCAGAGG
CATCCACCAAACGTGTTGTTATGCTTTCGATCAATTTTTGTCCAAACTTACCCCTTCTGT
TGTAGCGTCATTTTTTTTAGATCAATTCTTGACTGGTTAAGCGAAATTTGATTTTAACTA
GAGTATTAGCGGATGAAATGGACTGATGGAGTGATGATCTTTTGGTCGCAAAATGCGTGC
CTAGTCAGAGATGTTGGTTG