Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0151800-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:2852295:2856681:-1 gene:Os03g0151800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PREMATURE SENESCENCE AND DEATH 128 description:Similar to Cell division control protein 48 homolog A (AtCDC48a). (Os03t0151800-02);Hypothetical conserved gene. (Os03t0151800-03)
Sequence	ATGGCGAGCCAGGGAGAGCCCTCCTCCTCCTCCGATCCGAAGGGGAAGAAGGATTTCTCG ACGGCGATCCTCGAGAGGAAGAAGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAAC GATGATAACTCCGTCATCGGGATGCACCCCGACACCATGGAGAAGCTCCAGCTTTTCCGC GGCGACACTGTGCTGCTCAAGGGTAAGAAGAGAAAAGACACCATCTGCATTGTTCTTGCT GATGACACCTGCGAGGAGCCGAAGATCAGAATGAACAAGGTTGTCAGGAAGAACCTGAGA GTACGACTTGGTGATGTCGTGTCTGTTCATCAATGCCCAGATGTCAAATACGGCAAGCGT GTGCACATACTTCCAATTGATGATACTGTTGAGGGCATCACCGGAAACTTGTTTGATGCC TTCCTGAAACCGTACTTCCTTGAAGCATACCGTCCTTTGAGGAAAGGAGACCTTTTCCTT GTTAGGGGTGGGATGAGAAGTGTTGAATTCAAAGTTATAGAGACTGACCCTGCAGAGTAC TGCATTGTTGCACCTGATACGGAGATATTCTGTGATGGTGAGCCTATTAAGAGGGAGGAT GAGGAAAGACTTGATGAAGTTGGTTACGATGATGTTGGTGGAGTTAGGAAGCAGATGGCC CAAATCAGAGAACTTGTTGAGCTCCCATTGCGCCATCCCCAACTTTTCAAGTCTATTGGT GTGAAGCCTCCAAAGGGCATACTGCTTTATGGACCCCCTGGCTCTGGAAAGACCCTCATT GCTAGAGCTGTTGCTAATGAAACAGGTGCTTTCTTCTTTCTGATTAATGGCCCGGAGATT ATGTCAAAGCTAGCAGGAGAAAGTGAGAGTAATCTCAGGAAGGCATTTGAAGAAGCTGAG AAGAATGCACCATCAATCATTTTCATCGATGAGATAGACTCCATAGCACCAAAGAGAGAG AAGACCCATGGAGAAGTTGAGAGGCGCATCGTTTCACAGCTGTTGACTCTTATGGATGGG CTCAAAGCTCGTTCCCATGTCATTGTCATGGGTGCTACAAACCGGCCAAACAGTATTGAT CCTGCTCTCAGAAGGTTTGGTAGGTTCGATCGGGAGATTGACATTGGTGTTCCTGATGAA GTTGGGCGGCTTGAAGTTCTTCGGATTCACACCAAAAACATGAAGCTGGCTGAAGATGTT GACCTGGAACACATTGCCAAAGACACTCATGGGTATGTGGGTGCTGATCTTGCTGCTCTT TGCACTGAGGCTGCTCTCCAATGCATCCGTGAGAAGATGGATATTATAGATCTTGAGGAT GAGACCATAGATGCTGAGATACTTAACTCGATGGCTGTTACAAATGATCACTTCAAGACT GCACTAGGGACAAGCAACCCGTCTGCTCTCCGTGAAACTGTTGTTGAAGTTCCAAATGTC TCTTGGGAGGATATTGGTGGACTGGAGAATGTCAAACGGGAGCTGCAGGAGACTGTCCAA TATCCAGTGGAGCATCCTGAGAAATTTGAGAAGTTTGGCATGTCTCCGTCCAAAGGTGTT CTGTTCTATGGCCCTCCTGGCTGTGGTAAGACTTTGTTGGCCAAGGCAATTGCTAACGAG TGCCAGGCTAACTTCATTAGTGTCAAGGGACCTGAGCTGCTTACCATGTGGTTTGGTGAG AGTGAGGCCAATGTGCGTGAGATTTTTGACAAGGCTAGGCAGTCAGCTCCTTGTGTCCTC TTCTTTGATGAGCTTGACTCAATTGCTACCCAGAGAGGAAGCAGTGTTGGTGATGCCGGA GGTGCTGCTGATAGAGTGCTGAACCAGTTGTTGACTGAGATGGACGGCATGAACGCGAAG AAAACCGTGTTCATTATTGGTGCTACTAACAGGCCAGATATCATTGACCCTGCCTTGCTA AGGCCAGGGCGTCTTGATCAGCTTATCTACATTCCTCTGCCTGATGATCAATCTAGGCTG CAGATCTTCAAAGCTTGCCTCCGGAAGTCACCTGTGGCCAAGGATGTAGACCTGAATGCT CTTGCCAAATACACCCAAGGTTTCAGTGGTGCTGATATTACAGAAATCTGCCAGCGTGCA TGCAAATACGCCATCAGAGAGAACATTGAAAAGGACATCGAGATGGAGAAGCGGAGGAAG GACAACCCTGAAGCCATGGAGGAGGACGAGGTTGATGATATTGCTGAGATCAAGGCGGCT CACTTCGAGGAGTCGATGAAGTACGCACGCCGGAGTGTGAGTGACGCCGACATCCGCAAG TACCAGGCCTTCGCCCAGACTCTGCAGCAGTCTCGTGGGTTCGGCACCGAGTTTAGGTTC GCTGACCAGCCAGCGTCTGGCGCCGGCGCCGCCGCTGACCCCTTCGCATCCGCTGCCGCC GCAGCTGACGATGATGATTTATATAGTTAG

Peptide Sequence

PEP ID	Os03t0151800-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:2852295:2856681:-1 gene:Os03g0151800 transcript:Os03t0151800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PREMATURE SENESCENCE AND DEATH 128 description:Similar to Cell division control protein 48 homolog A (AtCDC48a). (Os03t0151800-02);Hypothetical conserved gene. (Os03t0151800-03)
Sequence	MASQGEPSSSSDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFR GDTVLLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKR VHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEY CIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG VKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAE KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSID PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAAL CTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNV SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAG GAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDDQSRL QIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIEMEKRRK DNPEAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRF ADQPASGAGAAADPFASAAAAADDDDLYS

Transcript Sequence

Transcript ID	Os03t0151800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:2852295:2856681:-1 gene:Os03g0151800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PREMATURE SENESCENCE AND DEATH 128 description:Similar to Cell division control protein 48 homolog A (AtCDC48a). (Os03t0151800-02);Hypothetical conserved gene. (Os03t0151800-03)
Sequence	ACAATCACTTCTCCCCCCGGAATATCTCCGCCAAGAGAAGAGAAGAGACACCCAACAACC CAAAACCTAGCGCCTCTGCGCTCGAGGCCCCCCCGAATCCGCGAATCCGCCGACTCCCAT GGCGAGCCAGGGAGAGCCCTCCTCCTCCTCCGATCCGAAGGGGAAGAAGGATTTCTCGAC GGCGATCCTCGAGAGGAAGAAGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAACGA TGATAACTCCGTCATCGGGATGCACCCCGACACCATGGAGAAGCTCCAGCTTTTCCGCGG CGACACTGTGCTGCTCAAGGGTAAGAAGAGAAAAGACACCATCTGCATTGTTCTTGCTGA TGACACCTGCGAGGAGCCGAAGATCAGAATGAACAAGGTTGTCAGGAAGAACCTGAGAGT ACGACTTGGTGATGTCGTGTCTGTTCATCAATGCCCAGATGTCAAATACGGCAAGCGTGT GCACATACTTCCAATTGATGATACTGTTGAGGGCATCACCGGAAACTTGTTTGATGCCTT CCTGAAACCGTACTTCCTTGAAGCATACCGTCCTTTGAGGAAAGGAGACCTTTTCCTTGT TAGGGGTGGGATGAGAAGTGTTGAATTCAAAGTTATAGAGACTGACCCTGCAGAGTACTG CATTGTTGCACCTGATACGGAGATATTCTGTGATGGTGAGCCTATTAAGAGGGAGGATGA GGAAAGACTTGATGAAGTTGGTTACGATGATGTTGGTGGAGTTAGGAAGCAGATGGCCCA AATCAGAGAACTTGTTGAGCTCCCATTGCGCCATCCCCAACTTTTCAAGTCTATTGGTGT GAAGCCTCCAAAGGGCATACTGCTTTATGGACCCCCTGGCTCTGGAAAGACCCTCATTGC TAGAGCTGTTGCTAATGAAACAGGTGCTTTCTTCTTTCTGATTAATGGCCCGGAGATTAT GTCAAAGCTAGCAGGAGAAAGTGAGAGTAATCTCAGGAAGGCATTTGAAGAAGCTGAGAA GAATGCACCATCAATCATTTTCATCGATGAGATAGACTCCATAGCACCAAAGAGAGAGAA GACCCATGGAGAAGTTGAGAGGCGCATCGTTTCACAGCTGTTGACTCTTATGGATGGGCT CAAAGCTCGTTCCCATGTCATTGTCATGGGTGCTACAAACCGGCCAAACAGTATTGATCC TGCTCTCAGAAGGTTTGGTAGGTTCGATCGGGAGATTGACATTGGTGTTCCTGATGAAGT TGGGCGGCTTGAAGTTCTTCGGATTCACACCAAAAACATGAAGCTGGCTGAAGATGTTGA CCTGGAACACATTGCCAAAGACACTCATGGGTATGTGGGTGCTGATCTTGCTGCTCTTTG CACTGAGGCTGCTCTCCAATGCATCCGTGAGAAGATGGATATTATAGATCTTGAGGATGA GACCATAGATGCTGAGATACTTAACTCGATGGCTGTTACAAATGATCACTTCAAGACTGC ACTAGGGACAAGCAACCCGTCTGCTCTCCGTGAAACTGTTGTTGAAGTTCCAAATGTCTC TTGGGAGGATATTGGTGGACTGGAGAATGTCAAACGGGAGCTGCAGGAGACTGTCCAATA TCCAGTGGAGCATCCTGAGAAATTTGAGAAGTTTGGCATGTCTCCGTCCAAAGGTGTTCT GTTCTATGGCCCTCCTGGCTGTGGTAAGACTTTGTTGGCCAAGGCAATTGCTAACGAGTG CCAGGCTAACTTCATTAGTGTCAAGGGACCTGAGCTGCTTACCATGTGGTTTGGTGAGAG TGAGGCCAATGTGCGTGAGATTTTTGACAAGGCTAGGCAGTCAGCTCCTTGTGTCCTCTT CTTTGATGAGCTTGACTCAATTGCTACCCAGAGAGGAAGCAGTGTTGGTGATGCCGGAGG TGCTGCTGATAGAGTGCTGAACCAGTTGTTGACTGAGATGGACGGCATGAACGCGAAGAA AACCGTGTTCATTATTGGTGCTACTAACAGGCCAGATATCATTGACCCTGCCTTGCTAAG GCCAGGGCGTCTTGATCAGCTTATCTACATTCCTCTGCCTGATGATCAATCTAGGCTGCA GATCTTCAAAGCTTGCCTCCGGAAGTCACCTGTGGCCAAGGATGTAGACCTGAATGCTCT TGCCAAATACACCCAAGGTTTCAGTGGTGCTGATATTACAGAAATCTGCCAGCGTGCATG CAAATACGCCATCAGAGAGAACATTGAAAAGGACATCGAGATGGAGAAGCGGAGGAAGGA CAACCCTGAAGCCATGGAGGAGGACGAGGTTGATGATATTGCTGAGATCAAGGCGGCTCA CTTCGAGGAGTCGATGAAGTACGCACGCCGGAGTGTGAGTGACGCCGACATCCGCAAGTA CCAGGCCTTCGCCCAGACTCTGCAGCAGTCTCGTGGGTTCGGCACCGAGTTTAGGTTCGC TGACCAGCCAGCGTCTGGCGCCGGCGCCGCCGCTGACCCCTTCGCATCCGCTGCCGCCGC AGCTGACGATGATGATTTATATAGTTAGATCGCTGTGCTATTTATATTTAACCTCCGTGC TTTTGTTCAGTATGTCTATTTCGCTTTGGTAAACTTTATCATATGTAACATACGGGGAAA CAGTGTACTATTTTTAAGTTAATATTTTGAGAGGTACTGAACCGAATTGCATGTTTCTGT ATGGATGTGTCGTGGATGAGCATGGTTGCGGGTTGTATTCATCGATTGGAGCATGGATAG ATTTGCGTTGTATGTTTGTGAGGTTTATAGATGCTCCTGCAAGGCTGGAACTTGTTGAAG TTTGTTTTTATAGTGTTAATCCGAGGCTTCATTTGGTCGGCGAGACACCAACCGACAAAA AAAAACAAAGGTCAGAGGGCAGACATAAGTTG