Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0150600-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:2807616:2809540:-1 gene:Os03g0150600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE TRANSPORTER 1 description:Pi transporter, Pi homeostasis (Os03t0150600-01);Similar to Isoform 2 of Inorganic phosphate transporter 1-1. (Os03t0150600-02)
Sequence	ATGGCGGGAGGGCAGCTCAACGTGCTGAGCACGCTCGACCAGGCGAAGACGCAATGGTAC CACTTCATGGCGATCGTCATCGCCGGCATGGGCTTCTTCACCGACGCCTACGACCTCTTC TGCATTTCCCTCGTCACCAAGCTGCTCGGCCGCATCTACTACACCGACGATTCCAAGGAC ACCCCCGGCGCGCTCCCGCCCAACGTGTCGGCCGCCGTCACCGGCGTCGCGCTCTGCGGC ACGCTCGCCGGCCAGCTTTTCTTCGGATGGCTCGGCGACAAGCTCGGACGCAAGAGCGTG TATGGTTTCACGCTGATTCTGATGGTCGTGTGCTCGGTCGCGTCCGGGCTCTCGTTCGGG AGCTCGGCCAAGGGCGTCGTGTCTACGCTCTGCTTCTTCCGGTTCTGGCTCGGCTTCGGC ATCGGCGGCGACTACCCGCTCAGCGCCACCATCATGTCGGAGTACGCGAACAAGAGGACG CGCGGGGCCTTCATCGCCGCCGTGTTCGCCATGCAGGGGTTCGGGATCCTCTTCGGCGCC ATCGTCGCGCTCGCGGTGTCGGCGGGGTTCCGGCACGCGTACCCGGCGCCGTCCTACTCC GACAACCACGCCGCGTCGCTCGTCCCGCAGGCCGACTACGTGTGGCGCATCATCCTCATG TTCGGCACCGTCCCGGCGGCGCTCACCTACTACTGGCGGATGAAGATGCCCGAGACGGCG CGGTACACGGCGCTCATCGCCCGCAACGCGAAGCAGGCGGCGGCCGACATGTCCAAGGTG CTGCACACCCAGATTGAGGAGAGCGCGGACCGCGCCGAGACGGTGGCCGTCGGCGGCGAG AGCTGGGGCCTCTTCTCGCGCCAGTTCCTGCGCCGCCACGGCCTCCACCTCCTCGCCACC ACCAGCACGTGGTTCCTCCTCGACATCGCCTTCTACAGCCAGAACCTGTTCCAGAAGGAC ATCTTCAGCAAGGTCGGGTGGATCCCGCCGGCGAAGACCATGAACGCGCTCGAGGAGCTC TACCGCATCGCCCGCGCCCAGGCGCTCATCGCGCTCTGCGGCACCATCCCGGGCTACTGG TTCACCGTCGCATTCATCGAGATCATGGGCAGGTTCTGGATCCAGATCATGGGCTTCGCC ATGATGACGGCGTTCATGCTCGGCCTCGCCATCCCGTACCACCACTGGACGACGCCGGGG CACCACACCGGCTTCATCGTCATGTACGGATTCACCTTCTTCTTCGCGAACTTCGGGCCA AACAGCACCACCTTCATCGTGCCGGCGGAGATATACCCGGCGCGGCTCCGGTCGACGTGC CACGGCATCAAGAACGCGCTCTTCGTGCTCGCCGGCACAAACTTCCTCGGGACGATCATG ACGCTGCTCGTGCCGGAGTCCAAGGGCATGTCGCTCGAGGTTATCTCGCAGGAGGTCGCC GACGGCGACGACGAGGAGGCGGCCTACCCGAAGTAA

Peptide Sequence

PEP ID	Os03t0150600-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:2807616:2809540:-1 gene:Os03g0150600 transcript:Os03t0150600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE TRANSPORTER 1 description:Pi transporter, Pi homeostasis (Os03t0150600-01);Similar to Isoform 2 of Inorganic phosphate transporter 1-1. (Os03t0150600-02)
Sequence	MAGGQLNVLSTLDQAKTQWYHFMAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDDSKD TPGALPPNVSAAVTGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLILMVVCSVASGLSFG SSAKGVVSTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILFGA IVALAVSAGFRHAYPAPSYSDNHAASLVPQADYVWRIILMFGTVPAALTYYWRMKMPETA RYTALIARNAKQAAADMSKVLHTQIEESADRAETVAVGGESWGLFSRQFLRRHGLHLLAT TSTWFLLDIAFYSQNLFQKDIFSKVGWIPPAKTMNALEELYRIARAQALIALCGTIPGYW FTVAFIEIMGRFWIQIMGFAMMTAFMLGLAIPYHHWTTPGHHTGFIVMYGFTFFFANFGP NSTTFIVPAEIYPARLRSTCHGIKNALFVLAGTNFLGTIMTLLVPESKGMSLEVISQEVA DGDDEEAAYPK

Transcript Sequence

Transcript ID	Os03t0150600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:2807616:2809540:-1 gene:Os03g0150600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE TRANSPORTER 1 description:Pi transporter, Pi homeostasis (Os03t0150600-01);Similar to Isoform 2 of Inorganic phosphate transporter 1-1. (Os03t0150600-02)
Sequence	AGCGGCAAAGCAAAAGAAAAAGTTAGATCAGAGGAGAGCTCAGAGCTCAAAGAGTTGGGA AGCCATGGCGGGAGGGCAGCTCAACGTGCTGAGCACGCTCGACCAGGCGAAGACGCAATG GTACCACTTCATGGCGATCGTCATCGCCGGCATGGGCTTCTTCACCGACGCCTACGACCT CTTCTGCATTTCCCTCGTCACCAAGCTGCTCGGCCGCATCTACTACACCGACGATTCCAA GGACACCCCCGGCGCGCTCCCGCCCAACGTGTCGGCCGCCGTCACCGGCGTCGCGCTCTG CGGCACGCTCGCCGGCCAGCTTTTCTTCGGATGGCTCGGCGACAAGCTCGGACGCAAGAG CGTGTATGGTTTCACGCTGATTCTGATGGTCGTGTGCTCGGTCGCGTCCGGGCTCTCGTT CGGGAGCTCGGCCAAGGGCGTCGTGTCTACGCTCTGCTTCTTCCGGTTCTGGCTCGGCTT CGGCATCGGCGGCGACTACCCGCTCAGCGCCACCATCATGTCGGAGTACGCGAACAAGAG GACGCGCGGGGCCTTCATCGCCGCCGTGTTCGCCATGCAGGGGTTCGGGATCCTCTTCGG CGCCATCGTCGCGCTCGCGGTGTCGGCGGGGTTCCGGCACGCGTACCCGGCGCCGTCCTA CTCCGACAACCACGCCGCGTCGCTCGTCCCGCAGGCCGACTACGTGTGGCGCATCATCCT CATGTTCGGCACCGTCCCGGCGGCGCTCACCTACTACTGGCGGATGAAGATGCCCGAGAC GGCGCGGTACACGGCGCTCATCGCCCGCAACGCGAAGCAGGCGGCGGCCGACATGTCCAA GGTGCTGCACACCCAGATTGAGGAGAGCGCGGACCGCGCCGAGACGGTGGCCGTCGGCGG CGAGAGCTGGGGCCTCTTCTCGCGCCAGTTCCTGCGCCGCCACGGCCTCCACCTCCTCGC CACCACCAGCACGTGGTTCCTCCTCGACATCGCCTTCTACAGCCAGAACCTGTTCCAGAA GGACATCTTCAGCAAGGTCGGGTGGATCCCGCCGGCGAAGACCATGAACGCGCTCGAGGA GCTCTACCGCATCGCCCGCGCCCAGGCGCTCATCGCGCTCTGCGGCACCATCCCGGGCTA CTGGTTCACCGTCGCATTCATCGAGATCATGGGCAGGTTCTGGATCCAGATCATGGGCTT CGCCATGATGACGGCGTTCATGCTCGGCCTCGCCATCCCGTACCACCACTGGACGACGCC GGGGCACCACACCGGCTTCATCGTCATGTACGGATTCACCTTCTTCTTCGCGAACTTCGG GCCAAACAGCACCACCTTCATCGTGCCGGCGGAGATATACCCGGCGCGGCTCCGGTCGAC GTGCCACGGCATCAAGAACGCGCTCTTCGTGCTCGCCGGCACAAACTTCCTCGGGACGAT CATGACGCTGCTCGTGCCGGAGTCCAAGGGCATGTCGCTCGAGGTTATCTCGCAGGAGGT CGCCGACGGCGACGACGAGGAGGCGGCCTACCCGAAGTAATTTGACCGCGCGCGTGATCA CGCAGGGAGTGGTTGCCGCTAACCATTGGTGTCATCTCTTTTCCCAACTGTAACAACTCT AGTCGTCGCTTCCGTACGAGTGGTAGTTTTTTCTTTTTCTTGGATAAGTTTGTAGAAATT TCAATTAGTGACTAGTTTGTAGTATATGTGAGTGAGATGTGTGTATATGTTCTTGAAGAA TTGGTGAACTTTTCCCTGGATTTGAAAGAACCGTGTAGTTTGAAAAAAGAATGCAATGGA TATGCTAGTAGTTCAGG