Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0147700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:2678302:2682146:-1 gene:Os03g0147700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB1691 (EMBRYO DEFECTIVE 1691); S-adenosylmethionine-dependent methyltransferase/ methyltransferase/ nucleic acid binding. (Os03t0147700-01);Similar to MT-A70 family protein, expressed. (Os03t0147700-02)
Sequence	ATGGACTCACGATCACCGAAAATTCCACGGAGAAGTCCTGATGATTCCAAGGATAAGGAC TCCGACAGGAACAGGGGAAGAGATGAAAAGAATGATTGGGACTCATCAAGAACATATGGT TCTGAGACTGATTGCAAGGAGGAAAGGTGTGATACCAATAAGAGGAAGGGTTCTGCCATG GGGGAGGATGTTGGTGATGATAGCAGATCAGTGGATAGAAGTCATGAAACTGAAGTGCAT GTGTTTAATGATAAGCAGGATAAAGCTGTAGAGATAAAAAACATTTTGCATGATGGAGTT GGACAGAGTGACTATGGTCAACGCCAACTAGGCTTGGACAATGAAAGAAGAAATGGTACA GTAGATAAATCAAGAGTGGATGCCCACATAGATGACAAATTGGGCAGCGGGAGGGACAGA AACTGGACTGGCAAAACACAGGAGCCTGAAGGATCTGTGGACTATTTGAGGAGTTGTAAA TCGCAAGATTCTAAAGAGGCAAGTGACTCGGAATGGAAGAATGCACAGGAAAGACAGGAT GGTGGGGGTTTCCATGGGCGAGTTGGTTACCGGCGAGATTTTAGGGGTAGATCTGAAAGT ACTAGAGGTTCTTCAACCTATGGAAGTCGGTATGACACTTCTGATTCGATAGAGATTCGA CCAAATAATAGTCTTGATTTTGGACGAGAGGGCTCTGTTTCTGGAAGATATGACGTGGGA GTGGGAGCTCATCGAGATGTAACATATGGAACAAACGGTGATAAAGTCACCAATTCTGAA CCAGATCAAAGTGGCAGTGCCAGCATGATTTCTCAATTTCCTCAACATGGTCATAAAGGT GATAGACCCTCCAGAGGAGGAAGGGGTAGACCAAATGGCAGGGATTCTCAAAGAGTTGGA GTCACATTACCAATTATGCCCCCTCCTTTTGGTCCTCTTGGTCTGCCACCGGGACCAATG CAACATATTGGGCCAAATATTCCCCACTCTCCAGGCCATCCTCTTCTACCTGGTGTTTTT GTGCCGCCATTTCCTGGGGGCCCTCTTTTGTGGCCTGGGGCTCGAGGTGTTGATGTGAAT ATGCTTTCTGTTCCACCCAACCTTCCCATCCCTCCTCCAGTTGCTGGTGAACATAGTTTC ACTCCAGGTATGGGAGCTGGACCTAATATTCACTTAAACCAATTTGGCTCCGGAATAGGT GCTCCAACAAATATGTCTGGATTGAGTTTCCATCAATTGGGCACTCAAAGCCGTGAAATG GTACATGGCAAACCTCCCGTTGGTGGTGGTTGGACACCAAATAGAAACAGTGGACCAACC AGAAAAGCTCCTTCAAGAGGTGAACAGAATGATTACTCACAGAACTTTGTGGACACTGGC ATGCGGCCTCAAAATTTCATTAGAGAATTGGATCTTACAAGCGTAGCAGAGGACTATCCA AAACTGAGAGAACTCATACAGAGGAAAGATGAAATTGTTGCCAAGTCTGCTTCACCACCA ATGTATTATAAGTGTGATCTGCGGCAACATGTTCTTTCTCCAGAATTTTTTGGTACGAAG TTTGATGTTATTCTTGTGGATCCCCCATGGGAGGAATATGTTCACCGGGCACCAGGAATC ACAGATCACATAGAGTACTGGAACGGTGAGGAGATTATGAATTTAAAGATTGAGGCTATA GCAGACACTCCATCGTTTGTCTTCCTCTGGGTCGGTGATGGTGTAGGTCTTGAACAGGGC CGTCAGTGTTTAAAGAAGTGGGGATTTCGAAGATGTGAGGATGTTTGCTGGGTGAAAACC AACAAGAAAAGTGCAACACCCAGTCTGCGGCATGACTCTCATACAATACTGCAACACTCA AAGGAGCATTGCTTGATGGGTATAAAAGGAACAGTGCGACGTAGCACTGATGGACATGTC ATCCATGCGAATATTGACACAGATATAATAATAGCCGATGAACCAACCGATGGTATTGTT TCATATGTTCTATTCAAAGATGCTTCTTGTTCTTCATATATGCTTGTGTACTAG

Peptide Sequence

PEP ID	Os03t0147700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:2678302:2682146:-1 gene:Os03g0147700 transcript:Os03t0147700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB1691 (EMBRYO DEFECTIVE 1691); S-adenosylmethionine-dependent methyltransferase/ methyltransferase/ nucleic acid binding. (Os03t0147700-01);Similar to MT-A70 family protein, expressed. (Os03t0147700-02)
Sequence	MDSRSPKIPRRSPDDSKDKDSDRNRGRDEKNDWDSSRTYGSETDCKEERCDTNKRKGSAM GEDVGDDSRSVDRSHETEVHVFNDKQDKAVEIKNILHDGVGQSDYGQRQLGLDNERRNGT VDKSRVDAHIDDKLGSGRDRNWTGKTQEPEGSVDYLRSCKSQDSKEASDSEWKNAQERQD GGGFHGRVGYRRDFRGRSESTRGSSTYGSRYDTSDSIEIRPNNSLDFGREGSVSGRYDVG VGAHRDVTYGTNGDKVTNSEPDQSGSASMISQFPQHGHKGDRPSRGGRGRPNGRDSQRVG VTLPIMPPPFGPLGLPPGPMQHIGPNIPHSPGHPLLPGVFVPPFPGGPLLWPGARGVDVN MLSVPPNLPIPPPVAGEHSFTPGMGAGPNIHLNQFGSGIGAPTNMSGLSFHQLGTQSREM VHGKPPVGGGWTPNRNSGPTRKAPSRGEQNDYSQNFVDTGMRPQNFIRELDLTSVAEDYP KLRELIQRKDEIVAKSASPPMYYKCDLRQHVLSPEFFGTKFDVILVDPPWEEYVHRAPGI TDHIEYWNGEEIMNLKIEAIADTPSFVFLWVGDGVGLEQGRQCLKKWGFRRCEDVCWVKT NKKSATPSLRHDSHTILQHSKEHCLMGIKGTVRRSTDGHVIHANIDTDIIIADEPTDGIV SYVLFKDASCSSYMLVY

Transcript Sequence

Transcript ID	Os03t0147700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:2678302:2682146:-1 gene:Os03g0147700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB1691 (EMBRYO DEFECTIVE 1691); S-adenosylmethionine-dependent methyltransferase/ methyltransferase/ nucleic acid binding. (Os03t0147700-01);Similar to MT-A70 family protein, expressed. (Os03t0147700-02)
Sequence	AGCCAACCACCGGCGGCGGCGGCGACTACCTCGCGCACGGCGGACGGCGGCGAGCGGCGA TCTGCCTCCGCCGCGCTCGTGCCTCGTCCCGCCGTGTAACCAAGGCTCGTCTACTTGAAG CGAACCCTCACCTCCCATCCTGTGAAACCTGAAGTTTCTAGCCAAGGTTTTTGAGCTCAG TAGTATTATTGGGAGGAAGGGTACACTATTTTGCATTCTTGAAGTTCACTGACCATCATT TGAGAATGGACTCACGATCACCGAAAATTCCACGGAGAAGTCCTGATGATTCCAAGGATA AGGACTCCGACAGGAACAGGGGAAGAGATGAAAAGAATGATTGGGACTCATCAAGAACAT ATGGTTCTGAGACTGATTGCAAGGAGGAAAGGTGTGATACCAATAAGAGGAAGGGTTCTG CCATGGGGGAGGATGTTGGTGATGATAGCAGATCAGTGGATAGAAGTCATGAAACTGAAG TGCATGTGTTTAATGATAAGCAGGATAAAGCTGTAGAGATAAAAAACATTTTGCATGATG GAGTTGGACAGAGTGACTATGGTCAACGCCAACTAGGCTTGGACAATGAAAGAAGAAATG GTACAGTAGATAAATCAAGAGTGGATGCCCACATAGATGACAAATTGGGCAGCGGGAGGG ACAGAAACTGGACTGGCAAAACACAGGAGCCTGAAGGATCTGTGGACTATTTGAGGAGTT GTAAATCGCAAGATTCTAAAGAGGCAAGTGACTCGGAATGGAAGAATGCACAGGAAAGAC AGGATGGTGGGGGTTTCCATGGGCGAGTTGGTTACCGGCGAGATTTTAGGGGTAGATCTG AAAGTACTAGAGGTTCTTCAACCTATGGAAGTCGGTATGACACTTCTGATTCGATAGAGA TTCGACCAAATAATAGTCTTGATTTTGGACGAGAGGGCTCTGTTTCTGGAAGATATGACG TGGGAGTGGGAGCTCATCGAGATGTAACATATGGAACAAACGGTGATAAAGTCACCAATT CTGAACCAGATCAAAGTGGCAGTGCCAGCATGATTTCTCAATTTCCTCAACATGGTCATA AAGGTGATAGACCCTCCAGAGGAGGAAGGGGTAGACCAAATGGCAGGGATTCTCAAAGAG TTGGAGTCACATTACCAATTATGCCCCCTCCTTTTGGTCCTCTTGGTCTGCCACCGGGAC CAATGCAACATATTGGGCCAAATATTCCCCACTCTCCAGGCCATCCTCTTCTACCTGGTG TTTTTGTGCCGCCATTTCCTGGGGGCCCTCTTTTGTGGCCTGGGGCTCGAGGTGTTGATG TGAATATGCTTTCTGTTCCACCCAACCTTCCCATCCCTCCTCCAGTTGCTGGTGAACATA GTTTCACTCCAGGTATGGGAGCTGGACCTAATATTCACTTAAACCAATTTGGCTCCGGAA TAGGTGCTCCAACAAATATGTCTGGATTGAGTTTCCATCAATTGGGCACTCAAAGCCGTG AAATGGTACATGGCAAACCTCCCGTTGGTGGTGGTTGGACACCAAATAGAAACAGTGGAC CAACCAGAAAAGCTCCTTCAAGAGGTGAACAGAATGATTACTCACAGAACTTTGTGGACA CTGGCATGCGGCCTCAAAATTTCATTAGAGAATTGGATCTTACAAGCGTAGCAGAGGACT ATCCAAAACTGAGAGAACTCATACAGAGGAAAGATGAAATTGTTGCCAAGTCTGCTTCAC CACCAATGTATTATAAGTGTGATCTGCGGCAACATGTTCTTTCTCCAGAATTTTTTGGTA CGAAGTTTGATGTTATTCTTGTGGATCCCCCATGGGAGGAATATGTTCACCGGGCACCAG GAATCACAGATCACATAGAGTACTGGAACGGTGAGGAGATTATGAATTTAAAGATTGAGG CTATAGCAGACACTCCATCGTTTGTCTTCCTCTGGGTCGGTGATGGTGTAGGTCTTGAAC AGGGCCGTCAGTGTTTAAAGAAGTGGGGATTTCGAAGATGTGAGGATGTTTGCTGGGTGA AAACCAACAAGAAAAGTGCAACACCCAGTCTGCGGCATGACTCTCATACAATACTGCAAC ACTCAAAGGAGCATTGCTTGATGGGTATAAAAGGAACAGTGCGACGTAGCACTGATGGAC ATGTCATCCATGCGAATATTGACACAGATATAATAATAGCCGATGAACCAACCGATGGTA TTGTTTCATATGTTCTATTCAAAGATGCTTCTTGTTCTTCATATATGCTTGTGTACTAGA TTGCTTTGTGGAAGAAGGACTTTTAGTCTATGCCGTTGTTTGTTGAGAATGTCAGTATGT CACATTTGGTGCCTTTATGAATAATTATGTTCTTGTCGCTTCATT