Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0146400-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:2576653:2580404:1 gene:Os03g0146400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Pheophorbide a oxygenase description:Pheophorbide a oxygenase, Leaf senescence, Wound responses (Os03t0146400-01);Similar to Lethal leaf-spot 1 (Fragment). (Os03t0146400-02)
Sequence	ATGCCCGTGATGGCTCCGACCGCATCTCTTCTCCTCTCCCCGAGGCCGCTGCCGGCGAGC CGCCGGGTCCCCTCGCTCCCGGCGCTCTCGGCTTCCGGTCGCCTGCGCCTCCGCCGCGCC CGCGCCGACACACGGCTCCGCGTGGCGGCGCCGCCGTCCGTCCCCGGGGAGGCGGACCAG GCGCCCGGGGAGACCGAGCCGAGCACGTCGTCGGCCGACGAGAAGTTCGTGTGGAGGGAC CACTGGTACCCCGTGTCCCTCGTCGAGGACCTCGACCCCAGCGTGCCCACCCCGTTCCAG CTCCTCAACCGCGACCTCGTCATCTGGAAGGACCCAAAATCCGGCGAGTGGGTCGCCCTC GACGACCGTTGCCCCCATCGCCTCGCGCCCCTCTCGGAGGGGCGGATCGATGAGACGGGG TGCTTGCAGTGCTCATACCACGGCTGGTCATTCGATGGCTCCGGCGCGTGCACCCGGATC CCGCAGGCGGCGCCCGAGGGGCCGGAGGCCAAGGCTGTGAGGTCGCCGAAGGCGTGCGCG ATCAAGTTCCCCACCCTCGTCTCGCAAGGGCTGCTCTTCGTGTGGCCCGACGAGAATGGG TGGGAGAAGGCCACGGCTACCAAGCCTCCGATGTTACCGAAGGAGTTTGAGGATCCTGCG TTCTCCACGGTGACCATCCAGAGGGATCTGTACTATGGCTATGATACATTGATGGAGAAC GTCTCTGATCCGTCGCATATAGAATTTGCTCACCACAAGGTCACTGGTCGAAGAGATCGA GCCAGGCCTTTGCCATTCAAGATGGAATCAAGTGGTGCATGGGGATATTCAGGGTCAAAT TCTGGAAACCCTCGCATCAGTGCAACTTTTGTGGCCCCTTGCTATGCACTGAACAAAATT GAGATAGACACAAAGTTACCCATTTTTGGAGATCAGAAATGGGTCATATGGATTTGCTCT TTCAACATTCCAATGGCCCCAGGGAAGACTCGTTCTATAGTTTGTAGTGCTCGGAACTTT TTCCAGTTTAGCATGCCAGGAAAAGCATGGTGGCAGCTTGTCCCTCGATGGTATGAGCAT TGGACTTCAAATTTGGTCTATGATGGTGATATGATAGTTCTGCAAGGGCAAGAGAAGATT TTCTTGTCTGCATCGAAGGAGTCTTCTGCAGATATTAATCAGCAGTACACAAAGATCACG TTTACACCCACGCAGGCTGACCGTTTTGTTTTGGCATTCCGGGCATGGCTAAGGAAATTT GGTAACAGCCAACCTGACTGGTTTGGAAATCCTAGCCAAGAAGTGTTGCCTTCCACTGTC CTTTCAAAGCGTGAGATGCTAGATAGATATGAGCAGCACACACTGAAATGCTCATCTTGC AAAGGGGCATACAACGCCTTCCAGACTCTGCAAAAGGTCTTCATGGGAGCGACAGTGGCG TTCTGTGCAACTGCTGGGATTCCTGCGGATGTTCAGTTCAGATTATTGCTTGCCGCTGCT GCTTTGGTTAGTGCCGCTGTAGCGTACGCATTTTATACGCTCCAGAAGAATTTTGTATTT GTAGATTACGTGCATGCTGAGATTGATTAA

Peptide Sequence

PEP ID	Os03t0146400-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:2576653:2580404:1 gene:Os03g0146400 transcript:Os03t0146400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Pheophorbide a oxygenase description:Pheophorbide a oxygenase, Leaf senescence, Wound responses (Os03t0146400-01);Similar to Lethal leaf-spot 1 (Fragment). (Os03t0146400-02)
Sequence	MPVMAPTASLLLSPRPLPASRRVPSLPALSASGRLRLRRARADTRLRVAAPPSVPGEADQ APGETEPSTSSADEKFVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVAL DDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACA IKFPTLVSQGLLFVWPDENGWEKATATKPPMLPKEFEDPAFSTVTIQRDLYYGYDTLMEN VSDPSHIEFAHHKVTGRRDRARPLPFKMESSGAWGYSGSNSGNPRISATFVAPCYALNKI EIDTKLPIFGDQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKAWWQLVPRWYEH WTSNLVYDGDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAFRAWLRKF GNSQPDWFGNPSQEVLPSTVLSKREMLDRYEQHTLKCSSCKGAYNAFQTLQKVFMGATVA FCATAGIPADVQFRLLLAAAALVSAAVAYAFYTLQKNFVFVDYVHAEID

Transcript Sequence

Transcript ID	Os03t0146400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:2576653:2580404:1 gene:Os03g0146400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Pheophorbide a oxygenase description:Pheophorbide a oxygenase, Leaf senescence, Wound responses (Os03t0146400-01);Similar to Lethal leaf-spot 1 (Fragment). (Os03t0146400-02)
Sequence	AGTTTCTCACCTCTCCGCACGAGAAAATTCGAATCCCCCTTCCGGCTGCTGGTTTTCGTG CCAGAAACAGGCGATTTTACCAGTGCCAGTTAGCTCTCGCCTTCCTCCTCCTCCATCGTG CTACTACTCTGTTCTTCTGGAAGAACACTGGTCTCCTCGCCTACCTCAGTCACCACTCAC CACACCAGGTGCGAGCTATAAAAACCGGCACGCCAAAAATCTTCAAAACCACACAGAAAC CTCAGATCTCCGAGGCTTCCCAAGCGAGTCGACGAAAATGCCCGTGATGGCTCCGACCGC ATCTCTTCTCCTCTCCCCGAGGCCGCTGCCGGCGAGCCGCCGGGTCCCCTCGCTCCCGGC GCTCTCGGCTTCCGGTCGCCTGCGCCTCCGCCGCGCCCGCGCCGACACACGGCTCCGCGT GGCGGCGCCGCCGTCCGTCCCCGGGGAGGCGGACCAGGCGCCCGGGGAGACCGAGCCGAG CACGTCGTCGGCCGACGAGAAGTTCGTGTGGAGGGACCACTGGTACCCCGTGTCCCTCGT CGAGGACCTCGACCCCAGCGTGCCCACCCCGTTCCAGCTCCTCAACCGCGACCTCGTCAT CTGGAAGGACCCAAAATCCGGCGAGTGGGTCGCCCTCGACGACCGTTGCCCCCATCGCCT CGCGCCCCTCTCGGAGGGGCGGATCGATGAGACGGGGTGCTTGCAGTGCTCATACCACGG CTGGTCATTCGATGGCTCCGGCGCGTGCACCCGGATCCCGCAGGCGGCGCCCGAGGGGCC GGAGGCCAAGGCTGTGAGGTCGCCGAAGGCGTGCGCGATCAAGTTCCCCACCCTCGTCTC GCAAGGGCTGCTCTTCGTGTGGCCCGACGAGAATGGGTGGGAGAAGGCCACGGCTACCAA GCCTCCGATGTTACCGAAGGAGTTTGAGGATCCTGCGTTCTCCACGGTGACCATCCAGAG GGATCTGTACTATGGCTATGATACATTGATGGAGAACGTCTCTGATCCGTCGCATATAGA ATTTGCTCACCACAAGGTCACTGGTCGAAGAGATCGAGCCAGGCCTTTGCCATTCAAGAT GGAATCAAGTGGTGCATGGGGATATTCAGGGTCAAATTCTGGAAACCCTCGCATCAGTGC AACTTTTGTGGCCCCTTGCTATGCACTGAACAAAATTGAGATAGACACAAAGTTACCCAT TTTTGGAGATCAGAAATGGGTCATATGGATTTGCTCTTTCAACATTCCAATGGCCCCAGG GAAGACTCGTTCTATAGTTTGTAGTGCTCGGAACTTTTTCCAGTTTAGCATGCCAGGAAA AGCATGGTGGCAGCTTGTCCCTCGATGGTATGAGCATTGGACTTCAAATTTGGTCTATGA TGGTGATATGATAGTTCTGCAAGGGCAAGAGAAGATTTTCTTGTCTGCATCGAAGGAGTC TTCTGCAGATATTAATCAGCAGTACACAAAGATCACGTTTACACCCACGCAGGCTGACCG TTTTGTTTTGGCATTCCGGGCATGGCTAAGGAAATTTGGTAACAGCCAACCTGACTGGTT TGGAAATCCTAGCCAAGAAGTGTTGCCTTCCACTGTCCTTTCAAAGCGTGAGATGCTAGA TAGATATGAGCAGCACACACTGAAATGCTCATCTTGCAAAGGGGCATACAACGCCTTCCA GACTCTGCAAAAGGTCTTCATGGGAGCGACAGTGGCGTTCTGTGCAACTGCTGGGATTCC TGCGGATGTTCAGTTCAGATTATTGCTTGCCGCTGCTGCTTTGGTTAGTGCCGCTGTAGC GTACGCATTTTATACGCTCCAGAAGAATTTTGTATTTGTAGATTACGTGCATGCTGAGAT TGATTAAACAAGCATGACATCTGATCTGAGATCTGGTGAAGCGACATCACACGATCATTT GTGCAACGTAAGCTAGGGAATATAGATTGTCGGTGGATATAGTCTAATGTTGCATTGTAG GCAATAGGTTTGTAATTTGTATTAGCTCTTCGGAGATGATGTACAAAAGTTGAAATGAAA AATGTAATTTTGCT