Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0145600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:2528998:2530420:-1 gene:Os03g0145600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-62 description:WD40/YVTN repeat-like domain containing protein. (Os03t0145600-01)
Sequence

ATGGCGGCGGTGCAGCTCCTTCCCCTTCCTCCCGCCGCCCCTCCTCAGCCGCGCCGCGGC
AAACCTGGTTGCTGGAACACGCCGCCAGCGCCGCCGAAGGTTTGCCACTACTGGAAGTCC
GGCAGGTGCAGCCGGAACCCCTGCCGATTCCTCCACACCGACGCGCCTGATCCGGCGCCG
CCGATCGCCGCCGTCAACACGCGCAGCAACACGTGGGTCAACCCGTCCTGCGTCGCCGCG
AATTCGGATGGCAAGGGTAGGGCTCCTCCGGTTCAGCCGGCGAAGCGGCAGGTTGAGGCG
CCGCCGGAAACGCCTGCCAAGCGCCGATGCGGCGGCGGCGCGTGGTGCGTCGGCGACGGC
TTCTGCGGCGTCGCGCGGCTCAAGGGTCACGCCAAGGCGGTCACCGGCTTCGCGCTGCCG
GAAGGGTCGGACAAGCTGTTCTCCGGCAGCCTGGACAGCACGGTGCGCGCCTGGGACTGC
AGCACCGGGCAGTGCGTCCGCGTCGAGGAGATGCAAGAAGGGGAGGTGCACAAGCTGATC
GCCATGGGCCCGTGGGTCCTCGCCGGCGTGCGCGGCGCCGTCAAGGCGATCCACACGGGG
ACCGGCAAGGAGCTCCGGCTGCGAGGGCCCGCGTCGCAGATCACCGCCATGCTAGCCGAG
GACGAGGACCACCTCTTCGCCGGCGCGGAGGACGGTGCCGTGTTCATGTGGAGGATGAAC
CAAGAACAGCAATCGTTCGACGAGGTCGCCGCGCTCACCGGCCACTACAAGGCCGTCGTG
TCGCTCGCGCAGGGCAAGGGCGCGCTCTACTCCGGCTCAACAGACGGCAGCATCAGGGTC
TGGGACCTCGACACCCACCGCTGCATCTACAGCTTCGCCGGCCACTCGTCGACGGTCACC
GCATTGCTCTGCTGGGAGCGGTTCTTGCTCTCCTCGTCCGACGATGGCACCGTGAAGGTC
TGGCAGTGGAAGCCTGATCACGACGACCTCGACCTCGAGGTGCACTACACCCACAAGGAA
GACGAACGGGTCGTTTCCATGGACGGAACGTACGACGCCGACGAGAAGCCCGTGCTGCTT
GTCTCCCGCGGCGATGGCGTTGTCCGTGTCTACGATCTCCCGTCGCTGAAGAAGAGAGGG
GATATTATCTGCGACGACGAGGTCAGGACGATATCCGTCAGGTCGCGCGGCGTCGTCTTC
ACCGGAGATGCGTCCGGCGAGGTCAGAGTGGTGAAGTGGACATCACTGAGTGATGCAGCA
GAGTCTTATTTAGCTATGGCCTGA

Peptide Sequence

PEP ID

Os03t0145600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:2528998:2530420:-1 gene:Os03g0145600 transcript:Os03t0145600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-62 description:WD40/YVTN repeat-like domain containing protein. (Os03t0145600-01)
Sequence

MAAVQLLPLPPAAPPQPRRGKPGCWNTPPAPPKVCHYWKSGRCSRNPCRFLHTDAPDPAP
PIAAVNTRSNTWVNPSCVAANSDGKGRAPPVQPAKRQVEAPPETPAKRRCGGGAWCVGDG
FCGVARLKGHAKAVTGFALPEGSDKLFSGSLDSTVRAWDCSTGQCVRVEEMQEGEVHKLI
AMGPWVLAGVRGAVKAIHTGTGKELRLRGPASQITAMLAEDEDHLFAGAEDGAVFMWRMN
QEQQSFDEVAALTGHYKAVVSLAQGKGALYSGSTDGSIRVWDLDTHRCIYSFAGHSSTVT
ALLCWERFLLSSSDDGTVKVWQWKPDHDDLDLEVHYTHKEDERVVSMDGTYDADEKPVLL
VSRGDGVVRVYDLPSLKKRGDIICDDEVRTISVRSRGVVFTGDASGEVRVVKWTSLSDAA
ESYLAMA

Transcript Sequence

Transcript ID

Os03t0145600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:2528998:2530420:-1 gene:Os03g0145600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-62 description:WD40/YVTN repeat-like domain containing protein. (Os03t0145600-01)
Sequence

AAGTCCCAACCACGACGATGGCGGCGGTGCAGCTCCTTCCCCTTCCTCCCGCCGCCCCTC
CTCAGCCGCGCCGCGGCAAACCTGGTTGCTGGAACACGCCGCCAGCGCCGCCGAAGGTTT
GCCACTACTGGAAGTCCGGCAGGTGCAGCCGGAACCCCTGCCGATTCCTCCACACCGACG
CGCCTGATCCGGCGCCGCCGATCGCCGCCGTCAACACGCGCAGCAACACGTGGGTCAACC
CGTCCTGCGTCGCCGCGAATTCGGATGGCAAGGGTAGGGCTCCTCCGGTTCAGCCGGCGA
AGCGGCAGGTTGAGGCGCCGCCGGAAACGCCTGCCAAGCGCCGATGCGGCGGCGGCGCGT
GGTGCGTCGGCGACGGCTTCTGCGGCGTCGCGCGGCTCAAGGGTCACGCCAAGGCGGTCA
CCGGCTTCGCGCTGCCGGAAGGGTCGGACAAGCTGTTCTCCGGCAGCCTGGACAGCACGG
TGCGCGCCTGGGACTGCAGCACCGGGCAGTGCGTCCGCGTCGAGGAGATGCAAGAAGGGG
AGGTGCACAAGCTGATCGCCATGGGCCCGTGGGTCCTCGCCGGCGTGCGCGGCGCCGTCA
AGGCGATCCACACGGGGACCGGCAAGGAGCTCCGGCTGCGAGGGCCCGCGTCGCAGATCA
CCGCCATGCTAGCCGAGGACGAGGACCACCTCTTCGCCGGCGCGGAGGACGGTGCCGTGT
TCATGTGGAGGATGAACCAAGAACAGCAATCGTTCGACGAGGTCGCCGCGCTCACCGGCC
ACTACAAGGCCGTCGTGTCGCTCGCGCAGGGCAAGGGCGCGCTCTACTCCGGCTCAACAG
ACGGCAGCATCAGGGTCTGGGACCTCGACACCCACCGCTGCATCTACAGCTTCGCCGGCC
ACTCGTCGACGGTCACCGCATTGCTCTGCTGGGAGCGGTTCTTGCTCTCCTCGTCCGACG
ATGGCACCGTGAAGGTCTGGCAGTGGAAGCCTGATCACGACGACCTCGACCTCGAGGTGC
ACTACACCCACAAGGAAGACGAACGGGTCGTTTCCATGGACGGAACGTACGACGCCGACG
AGAAGCCCGTGCTGCTTGTCTCCCGCGGCGATGGCGTTGTCCGTGTCTACGATCTCCCGT
CGCTGAAGAAGAGAGGGGATATTATCTGCGACGACGAGGTCAGGACGATATCCGTCAGGT
CGCGCGGCGTCGTCTTCACCGGAGATGCGTCCGGCGAGGTCAGAGTGGTGAAGTGGACAT
CACTGAGTGATGCAGCAGAGTCTTATTTAGCTATGGCCTGAATTAGTTTTGATTTAAGAG
AACCATCAGCCAATTTTTGCTTTGTGGTCTTGTGATTCAGTACTCCGATGTATGTAGTGT
ACACAACGTTGTAAACAGTGGAACCGCTACGCGGCTTGTGAAT