Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0145200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:2506064:2507170:1 gene:Os03g0145200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 4 description:Zinc finger, NHR/GATA-type domain containing protein. (Os03t0145200-01)
Sequence

ATGGTTGGTGATAAGGACGCGGCGGCGCTGGCTGGAGAGCTGACCGGCGACGCGGGCGCC
AGCTTGAACGGCTTCTTTGACCACACGGGTTTGGAGTCGGCGGTGGTAGGGGAGGGGCAA
GGGGAAGGGGAGGAGGAGGAGGAGCTGGAGTGGCTTTCGAACAAGGACGCGTTCCCGTCG
GTGGACACCATGGCGGCGGAGGTGGAGTCGGCGGCGCCCGGGGCGCCGGCGCGCGCGGCG
GTGGGGCCGAGGACCAAGGGTTTGCGGCGGCGCCGGCGGGTGACTGCTCCGTGGAGCCTG
GCGCCCCTTCTGTCGCGCCCGCGTCAGGCGGCGGCGGCGGCGGCGGACGCGGGGGCGCCG
CGGCGCCGGTGCACCCACTGCGCCGTGGATGAGACGCCGCAGTGGCGGCTCGGGCCGGAC
GGCCCCCGCACGCTGTGCAACGCGTGCGGCGTGCGGTTCAAGTCCGGGCGCCTCTTCCCG
GAGTACCGCCCGGCGAACAGCCCCACCTTCTCGCCGCTGCTGCACTCCAACTCCCACCGC
CGCGTCATGGAGATGCGCCTCCAGAGCGAGGAGGACGCCTCGGCCGCCAGCCGCGTCAAC
GCCAAGGCACGCCGCGCCGAGCGCGCGGCGGCGCGCCTCGCCGGCAAGGACAAGAAGTGA

Peptide Sequence

PEP ID

Os03t0145200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:2506064:2507170:1 gene:Os03g0145200 transcript:Os03t0145200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 4 description:Zinc finger, NHR/GATA-type domain containing protein. (Os03t0145200-01)
Sequence

MVGDKDAAALAGELTGDAGASLNGFFDHTGLESAVVGEGQGEGEEEEELEWLSNKDAFPS
VDTMAAEVESAAPGAPARAAVGPRTKGLRRRRRVTAPWSLAPLLSRPRQAAAAAADAGAP
RRRCTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHR
RVMEMRLQSEEDASAASRVNAKARRAERAAARLAGKDKK

Transcript Sequence

Transcript ID

Os03t0145200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:2506064:2507170:1 gene:Os03g0145200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 4 description:Zinc finger, NHR/GATA-type domain containing protein. (Os03t0145200-01)
Sequence

AAGAAAAATCGAATAAAAATTTTCCATTTCTTTATCCCCCGAGTCGTGACGGCGGCGGCG
GCGGACATGGTTGGTGATAAGGACGCGGCGGCGCTGGCTGGAGAGCTGACCGGCGACGCG
GGCGCCAGCTTGAACGGCTTCTTTGACCACACGGGTTTGGAGTCGGCGGTGGTAGGGGAG
GGGCAAGGGGAAGGGGAGGAGGAGGAGGAGCTGGAGTGGCTTTCGAACAAGGACGCGTTC
CCGTCGGTGGACACCATGGCGGCGGAGGTGGAGTCGGCGGCGCCCGGGGCGCCGGCGCGC
GCGGCGGTGGGGCCGAGGACCAAGGGTTTGCGGCGGCGCCGGCGGGTGACTGCTCCGTGG
AGCCTGGCGCCCCTTCTGTCGCGCCCGCGTCAGGCGGCGGCGGCGGCGGCGGACGCGGGG
GCGCCGCGGCGCCGGTGCACCCACTGCGCCGTGGATGAGACGCCGCAGTGGCGGCTCGGG
CCGGACGGCCCCCGCACGCTGTGCAACGCGTGCGGCGTGCGGTTCAAGTCCGGGCGCCTC
TTCCCGGAGTACCGCCCGGCGAACAGCCCCACCTTCTCGCCGCTGCTGCACTCCAACTCC
CACCGCCGCGTCATGGAGATGCGCCTCCAGAGCGAGGAGGACGCCTCGGCCGCCAGCCGC
GTCAACGCCAAGGCACGCCGCGCCGAGCGCGCGGCGGCGCGCCTCGCCGGCAAGGACAAG
AAGTGATGGAACAAAAAACCGTTGCCTCTTCCCCGGCGGAGGCGAAGTTGGACGGAGACG
ATTAGCGCGTGTCATCTCATCTCCTTTTGCATTTCTTTTCAATTTCCATTTTGTAGAACA
TTAGGATTAGAGAGAGGTTTAAGAACATCTGCCAAATCTTAGTTCTTGGCAAGGAAAGAT
CGACAGACATCAAAGCAGCCTCTCGTCATGCTCAATTTTTCCTGAAACCATGGCAACCTT
GGTGTTGTAAACAAAGCAAGCGGTGAAAGTGCTGTTGCTGTTTTTGC