Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0143700-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:2417244:2419564:1 gene:Os03g0143700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3741 domain containing protein. (Os03t0143700-01);Hypothetical conserved gene. (Os03t0143700-02)
Sequence

TTAAAACCTAGCACTGCTCTTACTTCAATGGAGCATTTTCAGAAAAATGGGCATGATAAC
CTGGATTATTCTGAAGCCCCTGTTATATCAAGGCATTTGAGTGATGAAATAAATTGGTCG
GCACAGGACATGTGCCACCAACATGATGAATCTTTTCGAGGTTGCATGCAGTCAAATATG
TTCATCAGAGATAGAGTGTACTATGGATATGCTGAAGAAGAGGGTAGTAGCTTCAGTGAC
TCGGAAATTGGAAGTCCAACATCACGCCATTCCTGGGAGTACATATACCGGTTTAGCAAT
CCTTACTTCGGCTCAACTTTAAGCCATGCTTCTTGTTCTCCTGACTCGCTTGTAACTAGG
GAGGCTAAGAAGCATACCTCTGATAGGTGGCCAACTGTATCTTCTAATGAGATTAGCCAA
GAAAAGGTGCTGGTGCGGAGGAGCTTGAGCACACTCGGTGAAATGCTTGCGATGTCTGAT
ATGAAGAAAAAAGGGGCTGCTGAACAAGTGGTCACTAATACCAGCAACCAGTTGTGCAGC
AATGAACCAAGACTTGCAGTACCATCTAAATGTTCTGTTGATGGAGACGGAGAGAGCTCC
CTCAGGAAAATTTCAAGGTCAAAATCTGTTCCAGTCTCATCAGCAGCCTTTGACAGCCTG
AGGTTAGATGATGGATGCTCAAATCCTGAACATGAAGAACCCACATCATCAAAAGAGGAG
ATCAAACCCAAGAATGGCAAGTCATCTCTCAAGGGAAAGATTTCAAGTTTCTTCCTGAAA
CGCAAGAAATCAGGAAAAGATAAGCTTGCCCCATCCCCCTTGGGGGCCTTGGGTACCAGA
GTTCCGTTGGCCAGTAATGCATCAATAGTTAGCTCAGATGTATCACAGACTGAATGGACT
AGCTTACAAGATGATGTTGCTTCAGAAAATTTAGAGAAGTTTGATATTGCACCAACAGTA
GTTCCGGTCAATGAACCTGAAGCAACTTCTTCATCTAAGCCTCCCATAATTACTCTTGAG
AAAGCACTCTCGTTTGAGATCCGAAATTCCCACTTTGATCAGCCCAGCCCTACATCAGTT
CTTGATGCATCATTTGAGGATGCTAGTGAGAAGTCACCCAATTCATCCGAGCACGCAATT
ATCGCTAAACAAGAACCTCTATCAAGATCTCTTCCTATTGGATCAATCGCGCGGACTTTA
TCATGGGATGATTCTTCACAAGAGGCTACATTGTGTTCAGCCAAAGGAGATAGCCACGAA
CAAGATCAACACGAATTTGTCGAAAAGATTCTATCTTCTGTTGGGTTCGACAACGAAAAG
ACCAGCGATATTTTCGTGCGGTGGCATTCGCATGATTTCCCTCTAGGCACCGGCGTGCTT
GACCAGTTCTTGGAACGCAAGGTGGAGGATGCCAAGTGCAGGGAGAGGCGGTCAAACCAG
AGGCTCCTCATCGATTCCGTCAATGCTGCCCTACTAGACATCGGCCAAAGCAAGCTTTGG
GGAGCTTACCCTTGCACTGACCCACAAGTTAACAATGCACGGAGAGTTGCCACAGGCGAG
GTGCTGGTTGTTGATGAGGTATGGAGGTTAGTGAAAGGCTGGCTCTCGGACGATGATGGC
GAGAAACATATGGTCAATGCGGAGGACAATGCGGGGTTAGTGGCTGATTGGGTTGTCGGC
AAGGAGATTCAAGGCAGGTCATGGCCCGAAGCACTGCGGTTGGAGGTGGATGAAATCAGC
ACGGAGATATGTGGGGAGGTCCTGGACGAGTTGGTTGGGGAGGCATTTTCAGAACTAGTT
GGGTGTCATTGA

Peptide Sequence

PEP ID

Os03t0143700-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:2417244:2419564:1 gene:Os03g0143700 transcript:Os03t0143700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3741 domain containing protein. (Os03t0143700-01);Hypothetical conserved gene. (Os03t0143700-02)
Sequence

LKPSTALTSMEHFQKNGHDNLDYSEAPVISRHLSDEINWSAQDMCHQHDESFRGCMQSNM
FIRDRVYYGYAEEEGSSFSDSEIGSPTSRHSWEYIYRFSNPYFGSTLSHASCSPDSLVTR
EAKKHTSDRWPTVSSNEISQEKVLVRRSLSTLGEMLAMSDMKKKGAAEQVVTNTSNQLCS
NEPRLAVPSKCSVDGDGESSLRKISRSKSVPVSSAAFDSLRLDDGCSNPEHEEPTSSKEE
IKPKNGKSSLKGKISSFFLKRKKSGKDKLAPSPLGALGTRVPLASNASIVSSDVSQTEWT
SLQDDVASENLEKFDIAPTVVPVNEPEATSSSKPPIITLEKALSFEIRNSHFDQPSPTSV
LDASFEDASEKSPNSSEHAIIAKQEPLSRSLPIGSIARTLSWDDSSQEATLCSAKGDSHE
QDQHEFVEKILSSVGFDNEKTSDIFVRWHSHDFPLGTGVLDQFLERKVEDAKCRERRSNQ
RLLIDSVNAALLDIGQSKLWGAYPCTDPQVNNARRVATGEVLVVDEVWRLVKGWLSDDDG
EKHMVNAEDNAGLVADWVVGKEIQGRSWPEALRLEVDEISTEICGEVLDELVGEAFSELV
GCH

Transcript Sequence

Transcript ID

Os03t0143700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:2417244:2419564:1 gene:Os03g0143700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3741 domain containing protein. (Os03t0143700-01);Hypothetical conserved gene. (Os03t0143700-02)
Sequence

TTTAAAACCTAGCACTGCTCTTACTTCAATGGAGCATTTTCAGAAAAATGGGCATGATAA
CCTGGATTATTCTGAAGCCCCTGTTATATCAAGGCATTTGAGTGATGAAATAAATTGGTC
GGCACAGGACATGTGCCACCAACATGATGAATCTTTTCGAGGTTGCATGCAGTCAAATAT
GTTCATCAGAGATAGAGTGTACTATGGATATGCTGAAGAAGAGGGTAGTAGCTTCAGTGA
CTCGGAAATTGGAAGTCCAACATCACGCCATTCCTGGGAGTACATATACCGGTTTAGCAA
TCCTTACTTCGGCTCAACTTTAAGCCATGCTTCTTGTTCTCCTGACTCGCTTGTAACTAG
GGAGGCTAAGAAGCATACCTCTGATAGGTGGCCAACTGTATCTTCTAATGAGATTAGCCA
AGAAAAGGTGCTGGTGCGGAGGAGCTTGAGCACACTCGGTGAAATGCTTGCGATGTCTGA
TATGAAGAAAAAAGGGGCTGCTGAACAAGTGGTCACTAATACCAGCAACCAGTTGTGCAG
CAATGAACCAAGACTTGCAGTACCATCTAAATGTTCTGTTGATGGAGACGGAGAGAGCTC
CCTCAGGAAAATTTCAAGGTCAAAATCTGTTCCAGTCTCATCAGCAGCCTTTGACAGCCT
GAGGTTAGATGATGGATGCTCAAATCCTGAACATGAAGAACCCACATCATCAAAAGAGGA
GATCAAACCCAAGAATGGCAAGTCATCTCTCAAGGGAAAGATTTCAAGTTTCTTCCTGAA
ACGCAAGAAATCAGGAAAAGATAAGCTTGCCCCATCCCCCTTGGGGGCCTTGGGTACCAG
AGTTCCGTTGGCCAGTAATGCATCAATAGTTAGCTCAGATGTATCACAGACTGAATGGAC
TAGCTTACAAGATGATGTTGCTTCAGAAAATTTAGAGAAGTTTGATATTGCACCAACAGT
AGTTCCGGTCAATGAACCTGAAGCAACTTCTTCATCTAAGCCTCCCATAATTACTCTTGA
GAAAGCACTCTCGTTTGAGATCCGAAATTCCCACTTTGATCAGCCCAGCCCTACATCAGT
TCTTGATGCATCATTTGAGGATGCTAGTGAGAAGTCACCCAATTCATCCGAGCACGCAAT
TATCGCTAAACAAGAACCTCTATCAAGATCTCTTCCTATTGGATCAATCGCGCGGACTTT
ATCATGGGATGATTCTTCACAAGAGGCTACATTGTGTTCAGCCAAAGGAGATAGCCACGA
ACAAGATCAACACGAATTTGTCGAAAAGATTCTATCTTCTGTTGGGTTCGACAACGAAAA
GACCAGCGATATTTTCGTGCGGTGGCATTCGCATGATTTCCCTCTAGGCACCGGCGTGCT
TGACCAGTTCTTGGAACGCAAGGTGGAGGATGCCAAGTGCAGGGAGAGGCGGTCAAACCA
GAGGCTCCTCATCGATTCCGTCAATGCTGCCCTACTAGACATCGGCCAAAGCAAGCTTTG
GGGAGCTTACCCTTGCACTGACCCACAAGTTAACAATGCACGGAGAGTTGCCACAGGCGA
GGTGCTGGTTGTTGATGAGGTATGGAGGTTAGTGAAAGGCTGGCTCTCGGACGATGATGG
CGAGAAACATATGGTCAATGCGGAGGACAATGCGGGGTTAGTGGCTGATTGGGTTGTCGG
CAAGGAGATTCAAGGCAGGTCATGGCCCGAAGCACTGCGGTTGGAGGTGGATGAAATCAG
CACGGAGATATGTGGGGAGGTCCTGGACGAGTTGGTTGGGGAGGCATTTTCAGAACTAGT
TGGGTGTCATTGAAGCTGAATTTTATTTTCCCTGCCTGTGGTGTCCACCTATTGCTTTTA
TTTCCAATCTGGTGGAGACCAAGGCTCATGTGCACTCCCCTGAGGCTCTTACTCTTGTGT
ATATTGCCCTCATTACTGCTCTGTATGCTCAAGATGTTCCCACTCCCTCTCTGTTAAATG
TCACTGCCATTCATACATTCTACAGCAATAACGTTTATGAATCGATACAGCTGCATTCC