Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0142900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:2375216:2378035:-1 gene:Os03g0142900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF946, plant family protein. (Os03t0142900-01)
Sequence	ATGGCTTGGTGGAGCTGCTTCGGCTGCGGCCCGTCGATCGCCGCCGAAGGCGAGGTCCGG CTGCCGGAGCCGTTCCAGCTGCCGGCGCCCTTGCCCGACTGGCCGCAAGGAGGAGATTTC TCTAAGGGCACAATATGCATAGGCGAGCTCGAGGTTGCAAGTATTACCAAATTCCAGAGT ATATGGAGCTGCTCAGGAGCTACATTCTATGAGCCGCAAGAAATCCCTGATGGTTTCCAC TGCCTTGGGCACTATGCCCAACAGAATGACCGACCTTTACAGGGATTTCTTCTTGTGGCA AGGGAAGCGGCTAGCTGCCAATCGATCAATCTCAAGCCTGCTCTTGAGAAACCATTAGAT TACACCCTTGTTTGGACTAGTACTGACTTGAATGATGATGACAATAGTGATTGTGGTTGC TTCTGGTCACCATCACCACCGGATGGTTATGAAGCTCTCGGCTATGTGGTTACTAGAGGA CCGAAGAAGCCCTCATTAGATGCAGTTCGATGTGTGCGGGGTGACCTCACTGATGAATGT GAAAACTTTAAGTCAATCACAAATATGGGAGGTAATTGCTACATCTGGAATACAAGGCCT TGCCACCGAGGGATGGCAGGAAGAGGGATACCTGTTGGTACATTCTTCTGTGGAACAGAT ACAGAAGAATCAGACATTCCCTGCTTGAAGAACTTTGATTCAAGTTTGAGTTCCATGCCT AATTTAGAGCAGATCAAAGCACTGATCGAGCACTATGGACCAACTGTTTTCTTCCACCCG CAAGAGATCTACTTACCATCGTCAGTCTCTTGGTTCTTTGAGAATGGAGCTACGCTCCAC AAGAAAGGTAAAGAAATGGGAGATGTAATTCTTGCTAGTGGTTCGAACCTTCCTGCTGGT GGGACAAATGACGGTGAGTACTGGATTGATATTCCTGATGGTGATAGGAATGAATATGTC AAAGCTGGTAATCTGAAGAGTGCTGAGCTCTATGTGCATATTAAGCCGGCTCATGGAGGA ACTTTCACTGACATTGCGATGTGGGTGTTCTGCCCATTTAATGGGCCAGCAACAATAAAG GTCGGATTTGCTAGCTTTGCTCTACAGAAAGTCGGCAGGCATACTGGTGACTGGGAGCAT TTCACCCTCCGTATAAGTAACTTCTCAGGAGAGCTCTCATCTATCTACTTCTCACAGCAC AGTGGAGGCGACTGGGTGGATGCATGTGATCTGGAGTTCATCTCAGGAAACAAAGCCATC GTTTACTCAGCGAAGGATGGCCACGCAAGCTATGCGCACCCTGGATGTTATCTGTTGGGA TCTGAGAAGGCTGGTGTTGGGGTAAGAAACGATGCAGCACGAAGCGATATTTTGGTCGAT TCGAGCACAAGGTATAAGATCATCTCTGCGGGAAATCTGGGAGATGCCGTTATCGAACCA TGCTGGCTGCAGTACATGAGAGAATGGGGCCCGACCGTGGAATACAACTCACGGTCGGAG ATAGACGCTGTGCTTAGCTTCTTGCCCTTCTTTCTTCGGTTCACAGCTGAAGCAATACTG AACAGTCTTCCGGTGGAGCTGTACGAGGAGGAAGGACCAACTGGACCAAAGGAGAAAAAC AACTGGGAAGGCGATGAGAGAGGCTAG

Peptide Sequence

PEP ID	Os03t0142900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:2375216:2378035:-1 gene:Os03g0142900 transcript:Os03t0142900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF946, plant family protein. (Os03t0142900-01)
Sequence	MAWWSCFGCGPSIAAEGEVRLPEPFQLPAPLPDWPQGGDFSKGTICIGELEVASITKFQS IWSCSGATFYEPQEIPDGFHCLGHYAQQNDRPLQGFLLVAREAASCQSINLKPALEKPLD YTLVWTSTDLNDDDNSDCGCFWSPSPPDGYEALGYVVTRGPKKPSLDAVRCVRGDLTDEC ENFKSITNMGGNCYIWNTRPCHRGMAGRGIPVGTFFCGTDTEESDIPCLKNFDSSLSSMP NLEQIKALIEHYGPTVFFHPQEIYLPSSVSWFFENGATLHKKGKEMGDVILASGSNLPAG GTNDGEYWIDIPDGDRNEYVKAGNLKSAELYVHIKPAHGGTFTDIAMWVFCPFNGPATIK VGFASFALQKVGRHTGDWEHFTLRISNFSGELSSIYFSQHSGGDWVDACDLEFISGNKAI VYSAKDGHASYAHPGCYLLGSEKAGVGVRNDAARSDILVDSSTRYKIISAGNLGDAVIEP CWLQYMREWGPTVEYNSRSEIDAVLSFLPFFLRFTAEAILNSLPVELYEEEGPTGPKEKN NWEGDERG

Transcript Sequence

Transcript ID	Os03t0142900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:2375216:2378035:-1 gene:Os03g0142900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF946, plant family protein. (Os03t0142900-01)
Sequence	AATGGAGAGAAGAGGCGCCGGTCCCCCGTTGGACCGGAGCTCGCGCGCGGGAGCCCGAGC CAGCCGCCGCTTTGACCTATAAATAAGAGGAGGAGAGAGCTCGGGGGTTGGACTGGGTGA AGAAGGGGCAAGGAAGGAAGGGGAGGGGAGGGGTTGGGGCGATGGCTTGGTGGAGCTGCT TCGGCTGCGGCCCGTCGATCGCCGCCGAAGGCGAGGTCCGGCTGCCGGAGCCGTTCCAGC TGCCGGCGCCCTTGCCCGACTGGCCGCAAGGAGGAGATTTCTCTAAGGGCACAATATGCA TAGGCGAGCTCGAGGTTGCAAGTATTACCAAATTCCAGAGTATATGGAGCTGCTCAGGAG CTACATTCTATGAGCCGCAAGAAATCCCTGATGGTTTCCACTGCCTTGGGCACTATGCCC AACAGAATGACCGACCTTTACAGGGATTTCTTCTTGTGGCAAGGGAAGCGGCTAGCTGCC AATCGATCAATCTCAAGCCTGCTCTTGAGAAACCATTAGATTACACCCTTGTTTGGACTA GTACTGACTTGAATGATGATGACAATAGTGATTGTGGTTGCTTCTGGTCACCATCACCAC CGGATGGTTATGAAGCTCTCGGCTATGTGGTTACTAGAGGACCGAAGAAGCCCTCATTAG ATGCAGTTCGATGTGTGCGGGGTGACCTCACTGATGAATGTGAAAACTTTAAGTCAATCA CAAATATGGGAGGTAATTGCTACATCTGGAATACAAGGCCTTGCCACCGAGGGATGGCAG GAAGAGGGATACCTGTTGGTACATTCTTCTGTGGAACAGATACAGAAGAATCAGACATTC CCTGCTTGAAGAACTTTGATTCAAGTTTGAGTTCCATGCCTAATTTAGAGCAGATCAAAG CACTGATCGAGCACTATGGACCAACTGTTTTCTTCCACCCGCAAGAGATCTACTTACCAT CGTCAGTCTCTTGGTTCTTTGAGAATGGAGCTACGCTCCACAAGAAAGGTAAAGAAATGG GAGATGTAATTCTTGCTAGTGGTTCGAACCTTCCTGCTGGTGGGACAAATGACGGTGAGT ACTGGATTGATATTCCTGATGGTGATAGGAATGAATATGTCAAAGCTGGTAATCTGAAGA GTGCTGAGCTCTATGTGCATATTAAGCCGGCTCATGGAGGAACTTTCACTGACATTGCGA TGTGGGTGTTCTGCCCATTTAATGGGCCAGCAACAATAAAGGTCGGATTTGCTAGCTTTG CTCTACAGAAAGTCGGCAGGCATACTGGTGACTGGGAGCATTTCACCCTCCGTATAAGTA ACTTCTCAGGAGAGCTCTCATCTATCTACTTCTCACAGCACAGTGGAGGCGACTGGGTGG ATGCATGTGATCTGGAGTTCATCTCAGGAAACAAAGCCATCGTTTACTCAGCGAAGGATG GCCACGCAAGCTATGCGCACCCTGGATGTTATCTGTTGGGATCTGAGAAGGCTGGTGTTG GGGTAAGAAACGATGCAGCACGAAGCGATATTTTGGTCGATTCGAGCACAAGGTATAAGA TCATCTCTGCGGGAAATCTGGGAGATGCCGTTATCGAACCATGCTGGCTGCAGTACATGA GAGAATGGGGCCCGACCGTGGAATACAACTCACGGTCGGAGATAGACGCTGTGCTTAGCT TCTTGCCCTTCTTTCTTCGGTTCACAGCTGAAGCAATACTGAACAGTCTTCCGGTGGAGC TGTACGAGGAGGAAGGACCAACTGGACCAAAGGAGAAAAACAACTGGGAAGGCGATGAGA GAGGCTAGAAGATGTTTCCAACTTCAAATATATGCTTCATAATTTGTTCCAGAATCCAGA TAGCTCTATAGATATGTACCCTAAGGGTGCTGTAATAGTGATATTGGGATCGAACGATCG ATATGCTTTGCCAAGGCATTTCAGTTCATAGAGTTTGTAGGTGAAATGCTGGCAAAGCTG AAGGTTGAAGAGGTAATCACGTTATGTTGTCCTGTTTGATCATCTGGCCTGTTTGTACCT TGTGTCAGCTATAACTCTGTTTCTAAGAACCATAAACTAAAGCCGACATAGTCGACAAAA GCTACTGACCATGTGAGCCTCTCTTTCCT