Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0142600-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:2341955:2343111:-1 gene:Os03g0142600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb transcription factor domain containing protein. (Os03t0142600-00)
Sequence

ATGGACGAGATCAGAAGCCTGATGCTGCAGCAAGGGTGGAGGAAGGGCCCGTGGACTGCG
CTGGAGGACAGGCTCCTGACCGAGTACGTGCAGCAGCACGGCGAAGGCAGCTGGAACTCC
GTGGCCAAGCTCACAGGGCTGAGGCGCAGCGGGAAGAGCTGCCGGCTGCGGTGGGTGAAC
TATCTCAGGCCGGACCTGAAGCGGGGGAAGATCACCCCCGACGAGGAGACCGTCATCCTC
CAGCTGCACGCCATGCTCGGCAACAGATGGTCGGCGATCGCGCGGTGCCTGCCGGGGAGG
ACGGACAACGAGATCAAGAACTACTGGAGGACGCACTTCAAGAAGGCGAGGCCGTCGCGG
CGTGCGCGGGCGCAGCTGCTGCACCAGTACCAGCTCCAGCAGCAGCAGCAGCATCGCCAG
TATCTCCATAGCCTGAACCTTCTGCAGCAGCAGCAGCAGCAGCTTCAGCAACAGCAACAG
CAACAGCAACAGCAGATGATGTTGCTGCAGGAGCAGGAGCAGCAGAGCCCGCAGGAGGAG
GCAGCTGACGATTCCATGGTGATGATGATGATGAACGATCTCCAGAGCAAGGAGCGTTGC
TGCACGGCGGTCTCGGTGGTGCCCGACGACTGCGTGCTCCCCGCCGATGATGATGCGATC
TGGGACAGCCTCTGGAGGCTCGTCGACGGCGATGGCAGCTGCGGCGAAGGCTCGAGCGGG
GGCGAGTACTGGGCTACTAGCTAA

Peptide Sequence

PEP ID

Os03t0142600-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:2341955:2343111:-1 gene:Os03g0142600 transcript:Os03t0142600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb transcription factor domain containing protein. (Os03t0142600-00)
Sequence

MDEIRSLMLQQGWRKGPWTALEDRLLTEYVQQHGEGSWNSVAKLTGLRRSGKSCRLRWVN
YLRPDLKRGKITPDEETVILQLHAMLGNRWSAIARCLPGRTDNEIKNYWRTHFKKARPSR
RARAQLLHQYQLQQQQQHRQYLHSLNLLQQQQQQLQQQQQQQQQQMMLLQEQEQQSPQEE
AADDSMVMMMMNDLQSKERCCTAVSVVPDDCVLPADDDAIWDSLWRLVDGDGSCGEGSSG
GEYWATS

Transcript Sequence

Transcript ID

Os03t0142600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:2341955:2343111:-1 gene:Os03g0142600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb transcription factor domain containing protein. (Os03t0142600-00)
Sequence

ATGGACGAGATCAGAAGCCTGATGCTGCAGCAAGGGTGGAGGAAGGGCCCGTGGACTGCG
CTGGAGGACAGGCTCCTGACCGAGTACGTGCAGCAGCACGGCGAAGGCAGCTGGAACTCC
GTGGCCAAGCTCACAGGGCTGAGGCGCAGCGGGAAGAGCTGCCGGCTGCGGTGGGTGAAC
TATCTCAGGCCGGACCTGAAGCGGGGGAAGATCACCCCCGACGAGGAGACCGTCATCCTC
CAGCTGCACGCCATGCTCGGCAACAGATGGTCGGCGATCGCGCGGTGCCTGCCGGGGAGG
ACGGACAACGAGATCAAGAACTACTGGAGGACGCACTTCAAGAAGGCGAGGCCGTCGCGG
CGTGCGCGGGCGCAGCTGCTGCACCAGTACCAGCTCCAGCAGCAGCAGCAGCATCGCCAG
TATCTCCATAGCCTGAACCTTCTGCAGCAGCAGCAGCAGCAGCTTCAGCAACAGCAACAG
CAACAGCAACAGCAGATGATGTTGCTGCAGGAGCAGGAGCAGCAGAGCCCGCAGGAGGAG
GCAGCTGACGATTCCATGGTGATGATGATGATGAACGATCTCCAGAGCAAGGAGCGTTGC
TGCACGGCGGTCTCGGTGGTGCCCGACGACTGCGTGCTCCCCGCCGATGATGATGCGATC
TGGGACAGCCTCTGGAGGCTCGTCGACGGCGATGGCAGCTGCGGCGAAGGCTCGAGCGGG
GGCGAGTACTGGGCTACTAGCTAAGCAGCTAGTAGAAGTGAAGCAGTGTAGAGAGTGTGG
AAGTCTGGAAGAAGAGAGGTGTAGTGCAGGTTTCAGTTGCTGCAAGGATCGATCGATATT
AGTGGCGGTACTTGCTAGTGTCAGGATCGTGCTTAGCTTAATTTTCCGACGCGATTAGCT
CGCCATGGATCGTGTTTTGCATTTTCACCATGACCATGCATGCGAGT