Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0142500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:2336789:2341656:1 gene:Os03g0142500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-9, RING-H2 protein 9 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0142500-01)
Sequence	ATGGCGCCGGCGTGGGATCGCGCCAAGCACGCGCTCGCCACCAGGCTCTGCATTCGCTTC CCGGCGCGGCAGAGGGCCGTGGAGGATGCACCGGCGGAAGACGAGGCGCCTCCGCCGCCT GCGGCGGCGGCGGCGCGTGCTGTGCCGGAGGAGAAGTTGAAGTCGCCATCGGTGTCCGTG CGGCGGCTTTCGAGCTCTGGGAGCTGGGGCAAGAAGAAGGTATGTGCCATTTGCCTTGGT GGCATACGGACAGGAGGACAGGCCTTGTTCACAGCTGAATGCTCCCACGAATTCCATTTT CATTGCATCTCCTCAAATGTCAACCATGGCAATTACGTCTGCCCGGTATGTCGTGCTGAG TGGAAAGAACTTCCCTTCCAAGGAACTCAACCTGGAGACACTGCTTATGGACGAGCTAGA GTAAGCACTGTAAATTGGCCCCAGGATGAGGGGCAGATGTCTGTTGTCCGCAGGCTTTCC CACGGATATAGTGGAAACCTTCAACAGCAACTTGCTGTCTTCCGTACTCCAGAGGCAAGC ATTTTCAATGATGATGAGAACATTGATCCTCAGTCTGAAACAGTTGATGATCATAATGCA GTTACTAATTCAGTTGAGATCAAGACATATTCAGAATTTCCAGCCATACAAAAATCAGAA AGACGGAAGGTCTTTGCTATCTTAATACATCTGAAGGCTCCAAAGTCCTTGGACTCGGTG AGCTCCCGTGCACCTCTTGACCTTGTGACTGTGCTTGATGTCAGTGGCAGCATGTCGGGG ATAAAACTTTCACTTCTTAAGCGTGCCATGAGTTTTGTCATCCAAACACTTGGACCCAAT GACCGCCTGTCTGTTGTAGCCTTTTCATCTACAGCACAGAGGCTCTTTCCACTTCGCCGA ATGACCTTAACTGGTCGGCAGCAAGCCTTGCAAGCCATTAGTTCCCTTGTCGCAAGTGGT GGCACAAACATTGCTGATGCGCTAAAGAAAGGTGCTAAAGTGGTCAAGGATCGTCGGCGG AAGAATCCTGTTAGCAGCATAATTCTTCTTTCTGATGGTCAAGACACCCATTCATTTCTA TCTGGTGAGGCTGATATAAACTACAGTATACTTGTTCCCCCTTCAATCCTTCCTGGGACA AGTCATCATGTGCAAATCCACACCTTTGGTTTTGGTACAGACCATGATTCGGCTGCCATG CATGCTATTGCTGAGACATCTAATGGCACATTTTCATTTATTGATGCTGAAGGCTCAATC CAAGATGCATTTGCTCAATGTATGGGTGGCCTCCTTAGCGTTGTAGTTAAGGATATGCGG CTGTGCATCGAGTGTATAGATGAAGGCGTGTCTCTTACCTCCATCAAGTCAGGCAGCTAT GCAAGTCAAGTAGCTGGAAATGAACGCAGTGGATTGGTTGATATTGGTGACCTCTATGCA GATGAAGAGAGGGGATTTCTGGTCACTCTACATGTCCCAGCCGCACATGGACAGACTGTG CTGATCAAACCAAAATGCACATACCTAGATGCAATAACTATGGAAAATGTCCAGCTAGAC GGTGAAGAAGTGATTATTCAGCGTCCTGCATATTGTGTTGACTGTACAATGTCACCTGAG GTTGAGCGTGAATGGCACCGTGTTCAAGCCACAGAGGACATGTCTGCTGCTCGATCTGCG GCTGAGGATGGCTCTTTCTCTCAGGCCGTGTCAATCCTTGAAAGCCGTAGGAGAATACTG GAGTTACATGCAGCACACTCTTCAGACAGTCAGTTCTTGGCATTAATCAAAGAGCTAAGG GAGATGCAGGATAGGGTGGAGAGCCGGCAGAGGTACGAGGAATCAGGCAGGGCTTACATG CTGTCAGGCCTGAGCTCACACTCATGGCAAAGAGCAACTGCACGTGGCGACTCGACAGAG CTCACAACCCTTATTAATACTTACCAGACACCATCCATGGTTGATATGCTACAGCGCTCG CAGACTATCCTGCCCTCTGTTGTCGAAATGCTGAACCGTTCTTCAACTGTTGCTACTTCA AAGTCCTTCTCTAGCTACCTCCCAACCTCCCGCCATATTGCTTGA

Peptide Sequence

PEP ID	Os03t0142500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:2336789:2341656:1 gene:Os03g0142500 transcript:Os03t0142500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-9, RING-H2 protein 9 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0142500-01)
Sequence	MAPAWDRAKHALATRLCIRFPARQRAVEDAPAEDEAPPPPAAAAARAVPEEKLKSPSVSV RRLSSSGSWGKKKVCAICLGGIRTGGQALFTAECSHEFHFHCISSNVNHGNYVCPVCRAE WKELPFQGTQPGDTAYGRARVSTVNWPQDEGQMSVVRRLSHGYSGNLQQQLAVFRTPEAS IFNDDENIDPQSETVDDHNAVTNSVEIKTYSEFPAIQKSERRKVFAILIHLKAPKSLDSV SSRAPLDLVTVLDVSGSMSGIKLSLLKRAMSFVIQTLGPNDRLSVVAFSSTAQRLFPLRR MTLTGRQQALQAISSLVASGGTNIADALKKGAKVVKDRRRKNPVSSIILLSDGQDTHSFL SGEADINYSILVPPSILPGTSHHVQIHTFGFGTDHDSAAMHAIAETSNGTFSFIDAEGSI QDAFAQCMGGLLSVVVKDMRLCIECIDEGVSLTSIKSGSYASQVAGNERSGLVDIGDLYA DEERGFLVTLHVPAAHGQTVLIKPKCTYLDAITMENVQLDGEEVIIQRPAYCVDCTMSPE VEREWHRVQATEDMSAARSAAEDGSFSQAVSILESRRRILELHAAHSSDSQFLALIKELR EMQDRVESRQRYEESGRAYMLSGLSSHSWQRATARGDSTELTTLINTYQTPSMVDMLQRS QTILPSVVEMLNRSSTVATSKSFSSYLPTSRHIA

Transcript Sequence

Transcript ID	Os03t0142500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:2336789:2341656:1 gene:Os03g0142500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-9, RING-H2 protein 9 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0142500-01)
Sequence	GTTCGCGTTCATCTTCTGCTTGTTATAATCCTCCATTCTTTTTGCTCTTCCTCGCACTCG CAGCGCCACCAACGAAAACCCAAGGCAACGCACCACGCTGCACGCGTCCGTGGTCGCCGC GAAACTTGCGCCGCGATGGGGAGGCCGATTCACCCCCAAATCCTGCCATCCTGATCCAGT TTGATTTCTCCGTCGAGCAGCAACAGCAGCAGCGAGGATTGGGTGTGCGAAAAGGAGTCG CCTTTGAGGGATCGTGAGCAATGGCGCCGGCGTGGGATCGCGCCAAGCACGCGCTCGCCA CCAGGCTCTGCATTCGCTTCCCGGCGCGGCAGAGGGCCGTGGAGGATGCACCGGCGGAAG ACGAGGCGCCTCCGCCGCCTGCGGCGGCGGCGGCGCGTGCTGTGCCGGAGGAGAAGTTGA AGTCGCCATCGGTGTCCGTGCGGCGGCTTTCGAGCTCTGGGAGCTGGGGCAAGAAGAAGG TATGTGCCATTTGCCTTGGTGGCATACGGACAGGAGGACAGGCCTTGTTCACAGCTGAAT GCTCCCACGAATTCCATTTTCATTGCATCTCCTCAAATGTCAACCATGGCAATTACGTCT GCCCGGTATGTCGTGCTGAGTGGAAAGAACTTCCCTTCCAAGGAACTCAACCTGGAGACA CTGCTTATGGACGAGCTAGAGTAAGCACTGTAAATTGGCCCCAGGATGAGGGGCAGATGT CTGTTGTCCGCAGGCTTTCCCACGGATATAGTGGAAACCTTCAACAGCAACTTGCTGTCT TCCGTACTCCAGAGGCAAGCATTTTCAATGATGATGAGAACATTGATCCTCAGTCTGAAA CAGTTGATGATCATAATGCAGTTACTAATTCAGTTGAGATCAAGACATATTCAGAATTTC CAGCCATACAAAAATCAGAAAGACGGAAGGTCTTTGCTATCTTAATACATCTGAAGGCTC CAAAGTCCTTGGACTCGGTGAGCTCCCGTGCACCTCTTGACCTTGTGACTGTGCTTGATG TCAGTGGCAGCATGTCGGGGATAAAACTTTCACTTCTTAAGCGTGCCATGAGTTTTGTCA TCCAAACACTTGGACCCAATGACCGCCTGTCTGTTGTAGCCTTTTCATCTACAGCACAGA GGCTCTTTCCACTTCGCCGAATGACCTTAACTGGTCGGCAGCAAGCCTTGCAAGCCATTA GTTCCCTTGTCGCAAGTGGTGGCACAAACATTGCTGATGCGCTAAAGAAAGGTGCTAAAG TGGTCAAGGATCGTCGGCGGAAGAATCCTGTTAGCAGCATAATTCTTCTTTCTGATGGTC AAGACACCCATTCATTTCTATCTGGTGAGGCTGATATAAACTACAGTATACTTGTTCCCC CTTCAATCCTTCCTGGGACAAGTCATCATGTGCAAATCCACACCTTTGGTTTTGGTACAG ACCATGATTCGGCTGCCATGCATGCTATTGCTGAGACATCTAATGGCACATTTTCATTTA TTGATGCTGAAGGCTCAATCCAAGATGCATTTGCTCAATGTATGGGTGGCCTCCTTAGCG TTGTAGTTAAGGATATGCGGCTGTGCATCGAGTGTATAGATGAAGGCGTGTCTCTTACCT CCATCAAGTCAGGCAGCTATGCAAGTCAAGTAGCTGGAAATGAACGCAGTGGATTGGTTG ATATTGGTGACCTCTATGCAGATGAAGAGAGGGGATTTCTGGTCACTCTACATGTCCCAG CCGCACATGGACAGACTGTGCTGATCAAACCAAAATGCACATACCTAGATGCAATAACTA TGGAAAATGTCCAGCTAGACGGTGAAGAAGTGATTATTCAGCGTCCTGCATATTGTGTTG ACTGTACAATGTCACCTGAGGTTGAGCGTGAATGGCACCGTGTTCAAGCCACAGAGGACA TGTCTGCTGCTCGATCTGCGGCTGAGGATGGCTCTTTCTCTCAGGCCGTGTCAATCCTTG AAAGCCGTAGGAGAATACTGGAGTTACATGCAGCACACTCTTCAGACAGTCAGTTCTTGG CATTAATCAAAGAGCTAAGGGAGATGCAGGATAGGGTGGAGAGCCGGCAGAGGTACGAGG AATCAGGCAGGGCTTACATGCTGTCAGGCCTGAGCTCACACTCATGGCAAAGAGCAACTG CACGTGGCGACTCGACAGAGCTCACAACCCTTATTAATACTTACCAGACACCATCCATGG TTGATATGCTACAGCGCTCGCAGACTATCCTGCCCTCTGTTGTCGAAATGCTGAACCGTT CTTCAACTGTTGCTACTTCAAAGTCCTTCTCTAGCTACCTCCCAACCTCCCGCCATATTG CTTGATCATAATGTAGTTCTAGCAATAACCAGCCAAGTGTTAGGGAAATGAAGATATCCA ATTCTTTAGTTTGTTTTCTGCAGATCTTTTTCCATTATTTATAGTGGGCATGGGATTAGA TTCATTATAAATGTTTGGGTATATACTCTAGTTTGGTGTACATGGGTAAACTTTGAAAGG GAATGATAAACAGCATAGCTGAAACAGGTGAAAGGAATGCTGACATTTCATTTGTTTCTC ATCATCATTTTATATTAATTCTCATTTTGTACATAAAATTCTCCCTTGGGTTGTTCCAGG ATGCTTGTAAGCTCTTGGCTGCATTCACACTTTCGATTGGTT