Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0141700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:2295350:2299785:1 gene:Os03g0141700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0141700-01)
Sequence

ATGGCGGACTCGAGCAAGCAGGTCGGTATGGACACCGATGGTGGTGGTGCGGCGGCCGCG
GCTGTGGATGGACAGAATCTGCCGGTTCTTGTGACTAACCGTAAGCGGGAGCTCACACTG
GAGGGGAAGGCTCTACCTGTGGATTGTTCTGGTCGTCGTCGCATCGATTTGGAGAAAGAT
TTATCTATGATTGGAAGTCCGTTCACAAAACACACGAGTGACAAGAATGGGGACAACAAC
GAGATGAGGGATGTGGATGAGCGGTGCACTATGGATGTTGATAACACCGAGATGAGGGAC
GTGGTGCATGAGCGGGACGCTAGGGATGTCGAGCTAGGTGATATGGCTGCTGCCAAGGAG
CTTGAGCAAGGTCACATGGCTTCTGTGAAGGAGGAGTCGGAGCTCATTAAGGTGGTTGAG
GTTCTTCACATGGCTCGCTGCCGGGAGATCACTGAGTACAACCTCAAGCTGGGTCGCTAT
GTTCCTACCCGATTTTGCTTTCGGAACATAGCCTTATTTGACCTTGATAAAGAGTCAAAA
CTTGGGCGTGGGCCACCGGTCAAATCGCTCAATTGCTCGGAATATACATGGATGGTGCAC
TCTATGAATATCTCATCTATCAAGGTGACCGAGTCTGATGTGGGTTACCCTATCAGCGTA
TTTGGCACTGTGTTGGCTAGGGATGAGTATGACTTCAGGTGTGTCTATTTGTTCAGGCGT
GACAGGGATGATCCCCAGCTCATCACTTCACCGGAGGATACACTAACACTGACAGGACCT
AATCGTGCACTTGGTGCATTAGATAGAGTGTATTTTGAGTTCCATCTGAAGGTTAGGGTG
GATGGTGATGTTGACAAAGTTTTTTGCAAAGGTGTGCGTGAACACCATGCTGATGCTTGT
CTAATTCGACCCGTGACTTTATGGCTACGAAGCTGTCTGAGTACTGTCATTTTGGTGTAT
TCGCCTGTTGAATCAGCCATAGAAGCTTGTGTTGCAGTCAACATTCAAGGGGTTGTATCC
AATTTCAATGGCAAAGTAACTGCTTGGACAACTGAAGACCATGAAAACAAAATCGTTCTG
TATGAGAGTAAAGTGGCAGGCACTAAGACAGTACTTGGGGTTGATGGATCTGTCGAGTTA
ACTCGTCGTTTTGTAGCTGTTGAACTGGAAGATATACTTGTGCTCAACATATGTGTTTTT
GAGGGTGAAGACGAGGCTGAATTTGAGCTCTATCTAGGACAAAATGATGAAGAATGCACT
CTCGAGCAAGGCCCTTATAAGCTACAGGTGAAGATTAGTTGGACGGCTGCCATGAAGAAG
CGATGGAGGGAAAGGTCCATGAAACTTGGTCGCAAGTTCGTGTTGGTGCGATAA

Peptide Sequence

PEP ID

Os03t0141700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:2295350:2299785:1 gene:Os03g0141700 transcript:Os03t0141700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0141700-01)
Sequence

MADSSKQVGMDTDGGGAAAAAVDGQNLPVLVTNRKRELTLEGKALPVDCSGRRRIDLEKD
LSMIGSPFTKHTSDKNGDNNEMRDVDERCTMDVDNTEMRDVVHERDARDVELGDMAAAKE
LEQGHMASVKEESELIKVVEVLHMARCREITEYNLKLGRYVPTRFCFRNIALFDLDKESK
LGRGPPVKSLNCSEYTWMVHSMNISSIKVTESDVGYPISVFGTVLARDEYDFRCVYLFRR
DRDDPQLITSPEDTLTLTGPNRALGALDRVYFEFHLKVRVDGDVDKVFCKGVREHHADAC
LIRPVTLWLRSCLSTVILVYSPVESAIEACVAVNIQGVVSNFNGKVTAWTTEDHENKIVL
YESKVAGTKTVLGVDGSVELTRRFVAVELEDILVLNICVFEGEDEAEFELYLGQNDEECT
LEQGPYKLQVKISWTAAMKKRWRERSMKLGRKFVLVR

Transcript Sequence

Transcript ID

Os03t0141700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:2295350:2299785:1 gene:Os03g0141700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0141700-01)
Sequence

GCTTTTCTTATTCCTTGCCGCGACGCCGCCTCTTTCCTCCTCTGAGCTGCGGCGTCCGAG
GCAACTGTATGTTCCCCGATCATTTTCGGATGCGATGAAATTGCAACAAATCTCCTCGAT
CAAATCTTTTAGGACGCGTTATCAATCGCAATCCATATCACTATCCCTAACCCGAATCTG
GCCGGAGTGAGGGGGAACAGCTGCGCCATCCCACTGGTCGCCGCCGCCGCCGGAGTGCCA
GCGCCCTCGCACTCCTCCTCCGTCGGGGCGTCCTCGTCGCAGCCGTTGGTCTCCCTTTCT
CACCAACGCCGTACTTGCGGGTCTCTCGCTTCCGCCGCGCCGGCCGTGGCACGGACGCAC
CGACGACTCCTCCAGGTGGGCGCGGCAGCCAGGACGGACTCCACCGGCGTGCCTATCGGA
TTCTACACGCCTCTTTTCGAGCAGCAAAGATGGCGGACTCGAGCAAGCAGGTCGGTATGG
ACACCGATGGTGGTGGTGCGGCGGCCGCGGCTGTGGATGGACAGAATCTGCCGGTTCTTG
TGACTAACCGTAAGCGGGAGCTCACACTGGAGGGGAAGGCTCTACCTGTGGATTGTTCTG
GTCGTCGTCGCATCGATTTGGAGAAAGATTTATCTATGATTGGAAGTCCGTTCACAAAAC
ACACGAGTGACAAGAATGGGGACAACAACGAGATGAGGGATGTGGATGAGCGGTGCACTA
TGGATGTTGATAACACCGAGATGAGGGACGTGGTGCATGAGCGGGACGCTAGGGATGTCG
AGCTAGGTGATATGGCTGCTGCCAAGGAGCTTGAGCAAGGTCACATGGCTTCTGTGAAGG
AGGAGTCGGAGCTCATTAAGGTGGTTGAGGTTCTTCACATGGCTCGCTGCCGGGAGATCA
CTGAGTACAACCTCAAGCTGGGTCGCTATGTTCCTACCCGATTTTGCTTTCGGAACATAG
CCTTATTTGACCTTGATAAAGAGTCAAAACTTGGGCGTGGGCCACCGGTCAAATCGCTCA
ATTGCTCGGAATATACATGGATGGTGCACTCTATGAATATCTCATCTATCAAGGTGACCG
AGTCTGATGTGGGTTACCCTATCAGCGTATTTGGCACTGTGTTGGCTAGGGATGAGTATG
ACTTCAGGTGTGTCTATTTGTTCAGGCGTGACAGGGATGATCCCCAGCTCATCACTTCAC
CGGAGGATACACTAACACTGACAGGACCTAATCGTGCACTTGGTGCATTAGATAGAGTGT
ATTTTGAGTTCCATCTGAAGGTTAGGGTGGATGGTGATGTTGACAAAGTTTTTTGCAAAG
GTGTGCGTGAACACCATGCTGATGCTTGTCTAATTCGACCCGTGACTTTATGGCTACGAA
GCTGTCTGAGTACTGTCATTTTGGTGTATTCGCCTGTTGAATCAGCCATAGAAGCTTGTG
TTGCAGTCAACATTCAAGGGGTTGTATCCAATTTCAATGGCAAAGTAACTGCTTGGACAA
CTGAAGACCATGAAAACAAAATCGTTCTGTATGAGAGTAAAGTGGCAGGCACTAAGACAG
TACTTGGGGTTGATGGATCTGTCGAGTTAACTCGTCGTTTTGTAGCTGTTGAACTGGAAG
ATATACTTGTGCTCAACATATGTGTTTTTGAGGGTGAAGACGAGGCTGAATTTGAGCTCT
ATCTAGGACAAAATGATGAAGAATGCACTCTCGAGCAAGGCCCTTATAAGCTACAGGTGA
AGATTAGTTGGACGGCTGCCATGAAGAAGCGATGGAGGGAAAGGTCCATGAAACTTGGTC
GCAAGTTCGTGTTGGTGCGATAACACGATGTCAATGTAAGCTGTTCCATCTCAAGAAGTG
CTGCCTTGGTATAACAATAAAAAATGTACAACTGATCTTGTACATGCTCTTGTACATGTA
CTATTTAGTTTGCCTTGGTATAACGATGTACTGGTAGTCTGCAAGACTTAGGTACTACCC
AATGAACGACAATGAACATTGATGGGTCTAGGATTGGTGTGGTTCTTC