Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0141200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:2272966:2276161:1 gene:Os03g0141200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-amylase 2 description:Similar to Beta-amylase PCT-BMYI (EC 3.2.1.2). (Os03t0141200-01)
Sequence	ATGATGTCGCTCAACCTGGCTCACCAGACCGGAGCGGCGGCCGCCGTGGCACCGGCGGCG CCACGTACGGCCGTGGTCGCGGCGGCTGCGGGTACAGTGTCTGCTCCGGCGGTCGCGCCG GCGGCGGCGCCGAGCCTGCAGCTGCAGACGCAGACTGTGGACCCGGCGGCGCCGGCGCAG GGGCCGGACCTCCCCATGGCCTTCCAGGCGCTGGTCGAGAGCCTGCCGGAGGAGCAGCAC CCGGACGTGGGCGGCGAGGAGCGGCGCAAGGTGGGCGTGCCGGTGTACGTGATGATGCCG CTGGACACGGTGCGCAAGGACGGCAACGGGCTGAACCGGCGGAAGGCGGTGGAGGCGTCC CTGAAGGCGCTGAAGAGCGCCGGCGCCGAGGGGATCATGGTGGACGTGTGGTGGGGCATC GCCGAGTGCGAGGGCCCCGGCCGCTACAACTTCACCGGGTACATGGAGCTCATGGAGATG GCCAAGAAGAACGGGCTCAAGGTGCAGGCCGTCATGTCGTTCCACCAGTGTGGCGGCAAC GTCGGCGACTCAGTCACTATACCACTTCCGAAATGGGTGTTGGAGGAGATGGACAAGGAC CAGGACCTGGCCTACACGGATCGGAGCGGCCGCCGCAACTACGAATACCTCTCGCTCGGC GCCGACGCCATGCCGGTGCTCAAGGGCCGCACGCCGGTGCAGTGCTACGGCGACTTCATG CGCGCCTTCCGCGACCACTTCGCCGCCTTCATGGGCAACACCATAGTCGAGATTCAAGTC GGCATGGGTCCGGCCGGTGAGCTCCGCTACCCGTCGTACCCGGAGAGCAATGGCACCTGG AGATTCCCCGGCATCGGCGAGTTCCAGTGCTATGACAGGTACATGCTGAGCAGTCTCAAG GCGGCGGCGGAGGCGGTGGGCAAGCCGGAGTGGGGCAACGCCGGGCCGGGAGACTCCGGC GGGTACAACGACTGGCCGGAGGACTCGCCCTTCTTCCGCCGTGAAGGTGGGTGGAACACT CCCTACGGTGAGTTTTTCATGAGCTGGTACTCGCAGATGCTCCTGGAACACGGCGAGCGC ATCCTGTCGGCGGCGTCGGGCGTGTACACCGGCACACCCGGCGTGAAGATCTCCGTGAAG GTGGCCGGCATCCACTGGCACTACGGCACGCGGTCCCACGCCGCGGAGCTGACGGCAGGG TACTACAACACGAGGCACCACGACGGGTACCAGCCGATCGCGCGCATGCTGGCCCGCCAC GGCGCGGTGCTCAACTTCACGTGCGTGGAGATGCGCAACCACGAGCAGCCGCAGGACGCG CAGTGCCGGCCCGAGGAGCTGGTGCAGCAGGTGGCGGCCGCGGCGCGGGAGTCCGGCGTG GGGCTCGCCGGCGAGAACGCGCTGCCGAGGTACGACGAGACGGCGCACGACCAGATCGTG ACGACGGCGGCGGAGAAGGCGGAGGAGGAGCGCATGGTAGCGTTCACCTACCTGCGCATG GGGCCCGACCTGTTCCAGCCGGACAACTGGCGCCGCTTCGCCGCGTTCGTGAAGCGCATG ACGGAGTCCGGCGTGCGGGACGTGTGCCGCGAGCAGGTGGAGCGGGAGGCGCAGGGCGTC GCGCACGCCACCGGGTCGCTCGTGCACGAGGCCGCCGTCGCGCTCAGCAACTGA

Peptide Sequence

PEP ID	Os03t0141200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:2272966:2276161:1 gene:Os03g0141200 transcript:Os03t0141200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-amylase 2 description:Similar to Beta-amylase PCT-BMYI (EC 3.2.1.2). (Os03t0141200-01)
Sequence	MMSLNLAHQTGAAAAVAPAAPRTAVVAAAAGTVSAPAVAPAAAPSLQLQTQTVDPAAPAQ GPDLPMAFQALVESLPEEQHPDVGGEERRKVGVPVYVMMPLDTVRKDGNGLNRRKAVEAS LKALKSAGAEGIMVDVWWGIAECEGPGRYNFTGYMELMEMAKKNGLKVQAVMSFHQCGGN VGDSVTIPLPKWVLEEMDKDQDLAYTDRSGRRNYEYLSLGADAMPVLKGRTPVQCYGDFM RAFRDHFAAFMGNTIVEIQVGMGPAGELRYPSYPESNGTWRFPGIGEFQCYDRYMLSSLK AAAEAVGKPEWGNAGPGDSGGYNDWPEDSPFFRREGGWNTPYGEFFMSWYSQMLLEHGER ILSAASGVYTGTPGVKISVKVAGIHWHYGTRSHAAELTAGYYNTRHHDGYQPIARMLARH GAVLNFTCVEMRNHEQPQDAQCRPEELVQQVAAAARESGVGLAGENALPRYDETAHDQIV TTAAEKAEEERMVAFTYLRMGPDLFQPDNWRRFAAFVKRMTESGVRDVCREQVEREAQGV AHATGSLVHEAAVALSN

Transcript Sequence

Transcript ID	Os03t0141200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:2272966:2276161:1 gene:Os03g0141200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-amylase 2 description:Similar to Beta-amylase PCT-BMYI (EC 3.2.1.2). (Os03t0141200-01)
Sequence	GGTAACCCTCACAATCCCGTTCGTCGAGATCGTCGCTTCGGCGTAACAACAAATAAGGGG AGATCCCCAAGTCCTAACCCGAATCCATTTCCAATAATCCATTTCGCCACGATTTGTTCT TGGTTGTCTGAGAGAGAGAGAGAGAGAGATCCGTATACATTGCTGCTACTTGAGGTCAAG CCCGTTCGTTCGCGCGCGCGCGCCTGTCTGTCTCTGTTTGATTGATTCTTCTACGTCGTC GACGTACGCCTGTTCATGATGTCGCTCAACCTGGCTCACCAGACCGGAGCGGCGGCCGCC GTGGCACCGGCGGCGCCACGTACGGCCGTGGTCGCGGCGGCTGCGGGTACAGTGTCTGCT CCGGCGGTCGCGCCGGCGGCGGCGCCGAGCCTGCAGCTGCAGACGCAGACTGTGGACCCG GCGGCGCCGGCGCAGGGGCCGGACCTCCCCATGGCCTTCCAGGCGCTGGTCGAGAGCCTG CCGGAGGAGCAGCACCCGGACGTGGGCGGCGAGGAGCGGCGCAAGGTGGGCGTGCCGGTG TACGTGATGATGCCGCTGGACACGGTGCGCAAGGACGGCAACGGGCTGAACCGGCGGAAG GCGGTGGAGGCGTCCCTGAAGGCGCTGAAGAGCGCCGGCGCCGAGGGGATCATGGTGGAC GTGTGGTGGGGCATCGCCGAGTGCGAGGGCCCCGGCCGCTACAACTTCACCGGGTACATG GAGCTCATGGAGATGGCCAAGAAGAACGGGCTCAAGGTGCAGGCCGTCATGTCGTTCCAC CAGTGTGGCGGCAACGTCGGCGACTCAGTCACTATACCACTTCCGAAATGGGTGTTGGAG GAGATGGACAAGGACCAGGACCTGGCCTACACGGATCGGAGCGGCCGCCGCAACTACGAA TACCTCTCGCTCGGCGCCGACGCCATGCCGGTGCTCAAGGGCCGCACGCCGGTGCAGTGC TACGGCGACTTCATGCGCGCCTTCCGCGACCACTTCGCCGCCTTCATGGGCAACACCATA GTCGAGATTCAAGTCGGCATGGGTCCGGCCGGTGAGCTCCGCTACCCGTCGTACCCGGAG AGCAATGGCACCTGGAGATTCCCCGGCATCGGCGAGTTCCAGTGCTATGACAGGTACATG CTGAGCAGTCTCAAGGCGGCGGCGGAGGCGGTGGGCAAGCCGGAGTGGGGCAACGCCGGG CCGGGAGACTCCGGCGGGTACAACGACTGGCCGGAGGACTCGCCCTTCTTCCGCCGTGAA GGTGGGTGGAACACTCCCTACGGTGAGTTTTTCATGAGCTGGTACTCGCAGATGCTCCTG GAACACGGCGAGCGCATCCTGTCGGCGGCGTCGGGCGTGTACACCGGCACACCCGGCGTG AAGATCTCCGTGAAGGTGGCCGGCATCCACTGGCACTACGGCACGCGGTCCCACGCCGCG GAGCTGACGGCAGGGTACTACAACACGAGGCACCACGACGGGTACCAGCCGATCGCGCGC ATGCTGGCCCGCCACGGCGCGGTGCTCAACTTCACGTGCGTGGAGATGCGCAACCACGAG CAGCCGCAGGACGCGCAGTGCCGGCCCGAGGAGCTGGTGCAGCAGGTGGCGGCCGCGGCG CGGGAGTCCGGCGTGGGGCTCGCCGGCGAGAACGCGCTGCCGAGGTACGACGAGACGGCG CACGACCAGATCGTGACGACGGCGGCGGAGAAGGCGGAGGAGGAGCGCATGGTAGCGTTC ACCTACCTGCGCATGGGGCCCGACCTGTTCCAGCCGGACAACTGGCGCCGCTTCGCCGCG TTCGTGAAGCGCATGACGGAGTCCGGCGTGCGGGACGTGTGCCGCGAGCAGGTGGAGCGG GAGGCGCAGGGCGTCGCGCACGCCACCGGGTCGCTCGTGCACGAGGCCGCCGTCGCGCTC AGCAACTGATCGATCAGCCGACCTCGCGCGTAGAAGGGTAAAAACGCTTTACATATTTTA TACTCCCAAGATTATTTGTTGTAATCAGCGTCGCGTACGCGTGCGACGACATCGATCGCT CAAGTGTGCAACCTTGATCTGCG