Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0139500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:2159337:2161733:-1 gene:Os03g0139500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCT domain-containing gene 10, CCT (CO, CO-LIKE and TOC1) domain protein 10, CCT domain protein 10, CCT MOTIF FAMILY (CMF) gene 4 description:Similar to CONSTANS-like protein CO9 (Fragment). (Os03t0139500-01)
Sequence	ATGCTTCACGACGATTGCATCGGTGAGGGACTCTCAAGCCCCATAGCTGCTCAAATTCTT GATTTCTGCGATGACGGCCTAGGTGATGATCTCTTCGCTGCAGTGGCCACTACCTCCGAG CAATTTGCAGCCTCTTCCGAGGATGGTTCATCGTCGTCCACAGCCACACCTCCCCTCTGC AGCAACAGCAATGACATCACAGCTGTTGCAGACACAGCTTTCTCCCCATTACTCTCCTTC GACTCCACCCTCTCAGCCTTCCTTGAGCAAGAGCAAAACCCTGACCAGGACACCAAGCTA CTTCCCTCCATTGATGAAACCTTTACTGCACCAGCATACTATCCAGCTGCCACCGAGGCC AACATAGAACAATTCAGCCAAATAATGGTTCCAGAGCATACAGATGCACCAATGCCCCCA ATGCAAACAAACAGGACTGCCAATGCCTTGCTGCCTCTAGCTTCAGGGTATGACGACGAG TGTTTCACAGCAGCACTAGCTGGAGGGTACATGGGTCTGGATGGAACTCTGTATGACCAA ACAGGAGTAATGATTCCAAATTGCAATGTGGAGACACCACAAGTAGGATTTTTCAACCAT AATAGTACTAGTAACAATGGTATGGTGATGGATTTGAATAATTTTGGAGAGTACCAGAGG ATGATGGAAGGTGAAGGACTGACCAGAACATATAGCGACACAGATTCGATGCATGGGGCG TTTAATAACGCTGCAGAGATGCAGATGGGAGAAAACACCCAGCACATGGTAACTGGATGC AATGATAGCCCACTAACGTTGCCTTCAACAGAAGGCTCAAGCTTGGAAGATACCCCCTAC AAAGGTGTGCGTCTAACAGCTGAACAGAGAAAGGAAAAGATCTCCAGGTACATAAAGAAA AGGAACGAAAGGAACTTCAGCAAAAAAATAAAGTACGCTTGTAGAAAAACCTTGGCGGAT AGCAGGCCTCGGGTCCGCGGAAGGTTTGCCAAGAACGACGAACTCTGTGAAGCTACCAGA TCAAGCTCCCAAGATTTTGAACAATATGAACATGTTGTGGGAATGAAGGGAGAAGACATG CTTGATTCTTCCAATATTTTGGCACATTTGAGTGGAATGAACCCTTACGGCTATAAGTAC AACAGCACTGTGGAATCCTGGATATAA

Peptide Sequence

PEP ID	Os03t0139500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:2159337:2161733:-1 gene:Os03g0139500 transcript:Os03t0139500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCT domain-containing gene 10, CCT (CO, CO-LIKE and TOC1) domain protein 10, CCT domain protein 10, CCT MOTIF FAMILY (CMF) gene 4 description:Similar to CONSTANS-like protein CO9 (Fragment). (Os03t0139500-01)
Sequence	MLHDDCIGEGLSSPIAAQILDFCDDGLGDDLFAAVATTSEQFAASSEDGSSSSTATPPLC SNSNDITAVADTAFSPLLSFDSTLSAFLEQEQNPDQDTKLLPSIDETFTAPAYYPAATEA NIEQFSQIMVPEHTDAPMPPMQTNRTANALLPLASGYDDECFTAALAGGYMGLDGTLYDQ TGVMIPNCNVETPQVGFFNHNSTSNNGMVMDLNNFGEYQRMMEGEGLTRTYSDTDSMHGA FNNAAEMQMGENTQHMVTGCNDSPLTLPSTEGSSLEDTPYKGVRLTAEQRKEKISRYIKK RNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELCEATRSSSQDFEQYEHVVGMKGEDM LDSSNILAHLSGMNPYGYKYNSTVESWI

Transcript Sequence

Transcript ID	Os03t0139500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:2159337:2161733:-1 gene:Os03g0139500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCT domain-containing gene 10, CCT (CO, CO-LIKE and TOC1) domain protein 10, CCT domain protein 10, CCT MOTIF FAMILY (CMF) gene 4 description:Similar to CONSTANS-like protein CO9 (Fragment). (Os03t0139500-01)
Sequence	GGGTCCAAAAGAGCTCCACCGCAATGCAACCAATCCCTTGTCTCTCCGTCGAGGATCAGT AATGCTTCACGACGATTGCATCGGTGAGGGACTCTCAAGCCCCATAGCTGCTCAAATTCT TGATTTCTGCGATGACGGCCTAGGTGATGATCTCTTCGCTGCAGTGGCCACTACCTCCGA GCAATTTGCAGCCTCTTCCGAGGATGGTTCATCGTCGTCCACAGCCACACCTCCCCTCTG CAGCAACAGCAATGACATCACAGCTGTTGCAGACACAGCTTTCTCCCCATTACTCTCCTT CGACTCCACCCTCTCAGCCTTCCTTGAGCAAGAGCAAAACCCTGACCAGGACACCAAGCT ACTTCCCTCCATTGATGAAACCTTTACTGCACCAGCATACTATCCAGCTGCCACCGAGGC CAACATAGAACAATTCAGCCAAATAATGGTTCCAGAGCATACAGATGCACCAATGCCCCC AATGCAAACAAACAGGACTGCCAATGCCTTGCTGCCTCTAGCTTCAGGGTATGACGACGA GTGTTTCACAGCAGCACTAGCTGGAGGGTACATGGGTCTGGATGGAACTCTGTATGACCA AACAGGAGTAATGATTCCAAATTGCAATGTGGAGACACCACAAGTAGGATTTTTCAACCA TAATAGTACTAGTAACAATGGTATGGTGATGGATTTGAATAATTTTGGAGAGTACCAGAG GATGATGGAAGGTGAAGGACTGACCAGAACATATAGCGACACAGATTCGATGCATGGGGC GTTTAATAACGCTGCAGAGATGCAGATGGGAGAAAACACCCAGCACATGGTAACTGGATG CAATGATAGCCCACTAACGTTGCCTTCAACAGAAGGCTCAAGCTTGGAAGATACCCCCTA CAAAGGTGTGCGTCTAACAGCTGAACAGAGAAAGGAAAAGATCTCCAGGTACATAAAGAA AAGGAACGAAAGGAACTTCAGCAAAAAAATAAAGTACGCTTGTAGAAAAACCTTGGCGGA TAGCAGGCCTCGGGTCCGCGGAAGGTTTGCCAAGAACGACGAACTCTGTGAAGCTACCAG ATCAAGCTCCCAAGATTTTGAACAATATGAACATGTTGTGGGAATGAAGGGAGAAGACAT GCTTGATTCTTCCAATATTTTGGCACATTTGAGTGGAATGAACCCTTACGGCTATAAGTA CAACAGCACTGTGGAATCCTGGATATAATTCTCATAAACACACAAATTAAAGTGTGTTTT CCTTTCAATTGTGCAAGCATTAAACACAGTTTTCCCTTGCTCCCAGTAAATAAGACTGAT GCTTTAGAAGCTCTATTCGCAAGAGAAGTGCTTAGGTCAAGTTATTGTTTCTGCACACTA CTGATTTGTAAATAGAATTGTTTCCTTGTCATAATAGAGATAACAAGTTTC