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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0136600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:2014957:2015602:1 gene:Os03g0136600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os03t0136600-01)
Sequence

ATGGCCGTCGCAGCACGCGCCTCCTCCTCCCTCCTCCGCGGCGTGGCCGTGTTGAGGCGG
CGGCCGCCGGTCCGATCCATCCACGAGGGGCCCGACACCATCGACGAGCTGCTCGACCGC
CACCTCGCCAAGAAGTCCCCCTCCTCCTCTTCCGGGGCGCTCGACGGAGACGCGGCGGAC
GCCGAGGCGCGCCGCCGGCTGACGAGCTCGCGGCGGGAGGCGCTGGGGCTGTACCGGGAC
ATCCTCCGGGTCACGCGGCTGTTCGAGTGGCCCGACGACCGCGGCGTCCCGTGGCGCGAG
GTGCTGCGCGCCAACGCGCGGCGGGAGTTCGAGGAGGCCCGCGGCGAGCGCGACCCGGAG
GTGGTGGCGCGGCTCCTCATCGGCGGCCGCGACGCCGTGCAGCAGGCGCTCGACCGGCTC
GCCGAGGCGTCCCGCCGCATGGTCGAGGCAGAGGAGGCCAAGCGCCGCGGCGGAGCATAG

Peptide Sequence

PEP ID

Os03t0136600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:2014957:2015602:1 gene:Os03g0136600 transcript:Os03t0136600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os03t0136600-01)
Sequence

MAVAARASSSLLRGVAVLRRRPPVRSIHEGPDTIDELLDRHLAKKSPSSSSGALDGDAAD
AEARRRLTSSRREALGLYRDILRVTRLFEWPDDRGVPWREVLRANARREFEEARGERDPE
VVARLLIGGRDAVQQALDRLAEASRRMVEAEEAKRRGGA

Transcript Sequence

Transcript ID

Os03t0136600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:2014957:2015602:1 gene:Os03g0136600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os03t0136600-01)
Sequence

AGCCATGGCCGTCGCAGCACGCGCCTCCTCCTCCCTCCTCCGCGGCGTGGCCGTGTTGAG
GCGGCGGCCGCCGGTCCGATCCATCCACGAGGGGCCCGACACCATCGACGAGCTGCTCGA
CCGCCACCTCGCCAAGAAGTCCCCCTCCTCCTCTTCCGGGGCGCTCGACGGAGACGCGGC
GGACGCCGAGGCGCGCCGCCGGCTGACGAGCTCGCGGCGGGAGGCGCTGGGGCTGTACCG
GGACATCCTCCGGGTCACGCGGCTGTTCGAGTGGCCCGACGACCGCGGCGTCCCGTGGCG
CGAGGTGCTGCGCGCCAACGCGCGGCGGGAGTTCGAGGAGGCCCGCGGCGAGCGCGACCC
GGAGGTGGTGGCGCGGCTCCTCATCGGCGGCCGCGACGCCGTGCAGCAGGCGCTCGACCG
GCTCGCCGAGGCGTCCCGCCGCATGGTCGAGGCAGAGGAGGCCAAGCGCCGCGGCGGAGC
ATAGCTGAAGTGCGGCTACATGCCGTTTCGATGCGTTTCATATGCTTAATTTTGTTCTGA
AGTTTGTATGAAAACGAGTAAAACTTGGCCTTGTGTCAAGCAAATGTTCTTCTAAATCTC
TAAATTCTGTTTTGTTAAGAATTGCAAATGAAAGTAGTTTTCTGTT