Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0134500-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:1919768:1922021:-1 gene:Os03g0134500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome p450 (CYP78A9). (Os03t0134500-00)
Sequence	ATGGAGAGCTCAGCAGCTGAGAACTGGTGGGTGCTGCCACTGACCTTCCTCCCGCCCATC TCAGGGCAAAATGAGAGCGCTGCCACACTGTCAGCCATGGCCACGAGCTTCGTCTACCTC GCGATCTTTGCATGCCTTGCATGGGCAGGCACTGCTCTGCTCTACTGGGCTCACCCGGGT GGCCCTGCATGGGGCAAGTACCGGAGGGCGAGGGGGCAGAGCCCGAGGTGTTCGATCCCA GGGCCGAAAGGGCTCCCGGTCGTCGGAAGCCTCGGCCTCATGTCCGGGCTGGCGCACTGC TCGCTGGCCGCCGAGGCGGCGCGCCGGCCGGGTGCCAAGAGGCTCATGGCGCTGTCGCTC GGCCCGGTACGCGCGGTCGTCACGTCGCACCCGGACGTGGCCAAGGAGATCCTCGACAAC CCGGCGTTCGCCGACCGGCCGCTCAACCACGCCGCGTACGGCCTCATGTTCCACCGCTCC ATCGGCTTCGCGGAGCACGGCCCGTACTGGCGCGCGCTCCGGCGCGTCGCCGCGGGCCAC CTGTTCGGCCCGAGGCAGGTGGACGCGTTCGCCCCGTACCGCGCGCGCGTCGCGGGGGGC GTGGTCGCCGCGCTGCGCGGCGCGGGCGGGGAGGCCGCGGTGCAGGTGCGCGGCGTCCTC CGGCGCGCGTCGCTCTACTACATCATGCGGTTCGTGTTCGGCAAGGAGTACGACGTGTCG CGCGGCGCGCCGGAGTCCGGGGAGGAGGTGGAGGAGCTGCTCGAGATGGTGCACGAAGGG TACGACCTCCTCGGGAAGGAGAACTGGTGCGACTACTTCCCGGGGCTCGCCGCCGTTGAC CCGCAGGGCGTCGGAGCACGGTGCGCCGAGCTCATGCCACGGGTGAACCGCTTCGTGCGA GGCATCATCCAGGAGCACCGTGGCAAGGCGATCGCCGGAGGAGAGGCACGTGACTTCGTC GACATATTGCTCTCGCTGCAGGAGAGCGAGGGGCTCGCCGACGCCGACATCGCCGCCGTG CTTTGGGAGATGATCTTTCGAGGAACTGACGCCATGGCCGTGCTGATGGAGTGGACACTA GCTCGCGTCGTCCTCCACCCCGACGTCCAAGCCAACGTGCACCGTGAGCTCGACGCGGTG GTCGGGCGGAGCAACACGGTCGCCGAGTCCGCCGTGCCGTCGCTGCCTTACCTGCAGGCG CTGCTCAAGGAGGCTCTCCGGATGCACCCGCCGGGCCCGCTCCTCTCGTGGCGCCACAGG GCCATATCCGACACCTACGTCGACGGCCACCTCGTCCCGGCCGGCACCACCGCCATGGTG AACCAGTGGGCGATGAGCCGCGACGCCGACGTGTGGGACGCGCCGCTCGAGTTCCAGCCG GAGCGGTTCCTCCCCGGCGGCAAGGCGCACGGCGTGTCCGTGCTCGGCGCCGACGGCCGC CTCGTGCCGTTCGGGTCCGGCAGGAGGAGCTGCCCCGGCAAGTCACTGGCCATGACGACC GTGACCGCCTGGATGGCAACGCTGCTGCACGAGTTCGAGTGGACGCCGGCGTCCGGCGCC GTCGACTTGTCGGAGGTGCTCCGCCTGTCGTGCGAGATGGCAGTGCCGCTCGAGGTCCGG GTAAGCGCACGGCGAAATGTGTGA

Peptide Sequence

PEP ID	Os03t0134500-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:1919768:1922021:-1 gene:Os03g0134500 transcript:Os03t0134500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome p450 (CYP78A9). (Os03t0134500-00)
Sequence	MESSAAENWWVLPLTFLPPISGQNESAATLSAMATSFVYLAIFACLAWAGTALLYWAHPG GPAWGKYRRARGQSPRCSIPGPKGLPVVGSLGLMSGLAHCSLAAEAARRPGAKRLMALSL GPVRAVVTSHPDVAKEILDNPAFADRPLNHAAYGLMFHRSIGFAEHGPYWRALRRVAAGH LFGPRQVDAFAPYRARVAGGVVAALRGAGGEAAVQVRGVLRRASLYYIMRFVFGKEYDVS RGAPESGEEVEELLEMVHEGYDLLGKENWCDYFPGLAAVDPQGVGARCAELMPRVNRFVR GIIQEHRGKAIAGGEARDFVDILLSLQESEGLADADIAAVLWEMIFRGTDAMAVLMEWTL ARVVLHPDVQANVHRELDAVVGRSNTVAESAVPSLPYLQALLKEALRMHPPGPLLSWRHR AISDTYVDGHLVPAGTTAMVNQWAMSRDADVWDAPLEFQPERFLPGGKAHGVSVLGADGR LVPFGSGRRSCPGKSLAMTTVTAWMATLLHEFEWTPASGAVDLSEVLRLSCEMAVPLEVR VSARRNV

Transcript Sequence

Transcript ID	Os03t0134500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:1919768:1922021:-1 gene:Os03g0134500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome p450 (CYP78A9). (Os03t0134500-00)
Sequence	CACAGCAGCAGCACAGTGCAATATTGCAAATGGAGAGCTCAGCAGCTGAGAACTGGTGGG TGCTGCCACTGACCTTCCTCCCGCCCATCTCAGGGCAAAATGAGAGCGCTGCCACACTGT CAGCCATGGCCACGAGCTTCGTCTACCTCGCGATCTTTGCATGCCTTGCATGGGCAGGCA CTGCTCTGCTCTACTGGGCTCACCCGGGTGGCCCTGCATGGGGCAAGTACCGGAGGGCGA GGGGGCAGAGCCCGAGGTGTTCGATCCCAGGGCCGAAAGGGCTCCCGGTCGTCGGAAGCC TCGGCCTCATGTCCGGGCTGGCGCACTGCTCGCTGGCCGCCGAGGCGGCGCGCCGGCCGG GTGCCAAGAGGCTCATGGCGCTGTCGCTCGGCCCGGTACGCGCGGTCGTCACGTCGCACC CGGACGTGGCCAAGGAGATCCTCGACAACCCGGCGTTCGCCGACCGGCCGCTCAACCACG CCGCGTACGGCCTCATGTTCCACCGCTCCATCGGCTTCGCGGAGCACGGCCCGTACTGGC GCGCGCTCCGGCGCGTCGCCGCGGGCCACCTGTTCGGCCCGAGGCAGGTGGACGCGTTCG CCCCGTACCGCGCGCGCGTCGCGGGGGGCGTGGTCGCCGCGCTGCGCGGCGCGGGCGGGG AGGCCGCGGTGCAGGTGCGCGGCGTCCTCCGGCGCGCGTCGCTCTACTACATCATGCGGT TCGTGTTCGGCAAGGAGTACGACGTGTCGCGCGGCGCGCCGGAGTCCGGGGAGGAGGTGG AGGAGCTGCTCGAGATGGTGCACGAAGGGTACGACCTCCTCGGGAAGGAGAACTGGTGCG ACTACTTCCCGGGGCTCGCCGCCGTTGACCCGCAGGGCGTCGGAGCACGGTGCGCCGAGC TCATGCCACGGGTGAACCGCTTCGTGCGAGGCATCATCCAGGAGCACCGTGGCAAGGCGA TCGCCGGAGGAGAGGCACGTGACTTCGTCGACATATTGCTCTCGCTGCAGGAGAGCGAGG GGCTCGCCGACGCCGACATCGCCGCCGTGCTTTGGGAGATGATCTTTCGAGGAACTGACG CCATGGCCGTGCTGATGGAGTGGACACTAGCTCGCGTCGTCCTCCACCCCGACGTCCAAG CCAACGTGCACCGTGAGCTCGACGCGGTGGTCGGGCGGAGCAACACGGTCGCCGAGTCCG CCGTGCCGTCGCTGCCTTACCTGCAGGCGCTGCTCAAGGAGGCTCTCCGGATGCACCCGC CGGGCCCGCTCCTCTCGTGGCGCCACAGGGCCATATCCGACACCTACGTCGACGGCCACC TCGTCCCGGCCGGCACCACCGCCATGGTGAACCAGTGGGCGATGAGCCGCGACGCCGACG TGTGGGACGCGCCGCTCGAGTTCCAGCCGGAGCGGTTCCTCCCCGGCGGCAAGGCGCACG GCGTGTCCGTGCTCGGCGCCGACGGCCGCCTCGTGCCGTTCGGGTCCGGCAGGAGGAGCT GCCCCGGCAAGTCACTGGCCATGACGACCGTGACCGCCTGGATGGCAACGCTGCTGCACG AGTTCGAGTGGACGCCGGCGTCCGGCGCCGTCGACTTGTCGGAGGTGCTCCGCCTGTCGT GCGAGATGGCAGTGCCGCTCGAGGTCCGGGTAAGCGCACGGCGAAATGTGTGAGGCTCTG CACGTCTGCAGCTAAAGGCGTGATGCACCATGACTTGATCGTGTAGTTTGTAGCCGTGAC CCTCGTGCTTGCCGATAGTAAATAAGCAGCTGGGAGAAAATGTGCACCAGCTCTGCTCTG AATTTGGTTCAGTTTTTAAACAGTTTTTATTGTGTGTGCGCCATCAGTGACTGAGTGAGT ATAAGGCTTCCAATTGTGTAAAAATATGCAAAAATCTATCAAAGATAATATGTGTGCAGT ATTATGTAAACTGTTTGTCATGTCTACA