Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0133500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:1882042:1884078:-1 gene:Os03g0133500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Acyl-CoA synthetase description:Similar to Adenosine monophosphate binding protein 1 AMPBP1. (Os03t0133500-01)
Sequence	ATGGAAGGCTGTATGCCGAGCGATGCAAACTACGCGCCGCTCACCCCGGTGAGCTTCTTG GAGCGCGCCGCCGTCGTGTACGGTGACCGCACGGCCGTCGTCTCTGGCGGCAGGGAGTAC TCGTGGCGCGAGACGCGGGAACGGTGCCTCGCTGGGGCGTCCGCGCTCGCGCGCCTCGGC GTCGGCCGCCGGGACGTGGTCGCCGTCATCGCAGCGAACATTCCGGCGATGTACGAGCTG CACTTCAGCGTGCCGATGGCCGGCGGCGTGCTCTGCACGCTGAACACCCGGCACGACGCG GCCATGGTGTCCGTCCTTCTCAGACATTCGGAGGCCAAGGTTTTCCTCGTCGAATCGCAG TTCCTCGCCGTCGCCCACGACGCCCTGAGGCTGCTCGCCGATGCTAAAGCCAAATTTCCC CTTGTCATCGCGATCTCCGACACCGGCGACAGCAGCAGCAGCGACGGTGGCGGGCTAGAG TACGAGGCGCTTCTGAGGGACGCGCCGCGGGGCTTCGAGATCAGGTGGCCGGCCGACGAG CGCGACCCGATATCGCTCAACTACACGTCGGGGACGACGTCGAGGCCGAAGGGCGTCATC TACAGCCACCGCGGCGCGTACCTGAACTCGCTGGCCGCGCTGCTCTGCAACGACATGACG TCCATGCCGGTGTACCTCTGGACCGTGCCCATGTTCCACTGCAACGGGTGGTGCATGGCG TGGGCCACGGCGGCGCAGGGCGGGACGAACATCTGCGTCAGGAACGTCGTGCCCAAGGTC ATCTTCGAGCAGATCGTGCGCCACGGCGTGACCAACATGGGCGGCGCGCCCACGGTGCTC AACATGATCGTGAACGCGCCGGCGTCGGAGCGGAGGCCGCTGCCGAGGAGGGTGCTCATC TCGACGGGCGGCGCGCCGCCGCCTCCGCAGGTGCTGGCCAAGATGGAGGAGCTCGGTTTC AACGTCCAGCACGGGTACGGCCTCACCGAGACGTACGGGCCGGCGACGCGGTGCGTGTGG AGACCCGAGTGGGACGCGCTGCCGCTCGCCGAGCGCGCGCGGATCAAGGCGCTCCAGGGG GTGCAGCACCAGATGTTGCAGGACGTCGACATCAAGGACCCGGTGACCATGGCGAGCGTG CCGTCCGACGGGCGCGCCGTCGGCGAGGTCATGCTCCGCGGCAACACGGTCATGAGCGGG TACTACAAGGACGCGGCGGCCACGGAGGAGGCCATGCGCGGCGGGTGGCTGCGCACGGGC GACCTCGGCGTGCGCCACCCTGACGGGTATATCCAGCTCAAGGATCGCGCCAAGGACATC ATCATATCGGGCGGCGAGAACATCAGCTCGATCGAGGTGGAGTCGGTGCTGTTCGGCCAC CACGCGGTGCTCGACGCGGCGGTGGTGGCGAGGCCGGACGACCACTGGGGCGAGACGGCG TGCGCGTTCGTCACGCTGAAGGACGGGGCAAGCGCGACGGCGCACGAGATCATCGCGTTC TGCCGTGCGCGGCTGCCGCGTTACATGGCGCCGAGGACGGTGGTGTTCGGCGACCTGCCC AAGACGTCGACGGGGAAGACGCAGAAGTTCTTGCTCCGGGAGAAGGCCAGGGCCATGGGA AGCCTGCCTATGCAAAGCAAATCCAAGTTGTAG

Peptide Sequence

PEP ID	Os03t0133500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:1882042:1884078:-1 gene:Os03g0133500 transcript:Os03t0133500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Acyl-CoA synthetase description:Similar to Adenosine monophosphate binding protein 1 AMPBP1. (Os03t0133500-01)
Sequence	MEGCMPSDANYAPLTPVSFLERAAVVYGDRTAVVSGGREYSWRETRERCLAGASALARLG VGRRDVVAVIAANIPAMYELHFSVPMAGGVLCTLNTRHDAAMVSVLLRHSEAKVFLVESQ FLAVAHDALRLLADAKAKFPLVIAISDTGDSSSSDGGGLEYEALLRDAPRGFEIRWPADE RDPISLNYTSGTTSRPKGVIYSHRGAYLNSLAALLCNDMTSMPVYLWTVPMFHCNGWCMA WATAAQGGTNICVRNVVPKVIFEQIVRHGVTNMGGAPTVLNMIVNAPASERRPLPRRVLI STGGAPPPPQVLAKMEELGFNVQHGYGLTETYGPATRCVWRPEWDALPLAERARIKALQG VQHQMLQDVDIKDPVTMASVPSDGRAVGEVMLRGNTVMSGYYKDAAATEEAMRGGWLRTG DLGVRHPDGYIQLKDRAKDIIISGGENISSIEVESVLFGHHAVLDAAVVARPDDHWGETA CAFVTLKDGASATAHEIIAFCRARLPRYMAPRTVVFGDLPKTSTGKTQKFLLREKARAMG SLPMQSKSKL

Transcript Sequence

Transcript ID	Os03t0133500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:1882042:1884078:-1 gene:Os03g0133500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Acyl-CoA synthetase description:Similar to Adenosine monophosphate binding protein 1 AMPBP1. (Os03t0133500-01)
Sequence	GGATTGCATTAGTTGCAATTGGTTCTTCTTCAGAGAGGCTAATTAGTGTGACAAATCGAT CCCGATTGCTGGTACACGAGCTGCCATGGAAGGCTGTATGCCGAGCGATGCAAACTACGC GCCGCTCACCCCGGTGAGCTTCTTGGAGCGCGCCGCCGTCGTGTACGGTGACCGCACGGC CGTCGTCTCTGGCGGCAGGGAGTACTCGTGGCGCGAGACGCGGGAACGGTGCCTCGCTGG GGCGTCCGCGCTCGCGCGCCTCGGCGTCGGCCGCCGGGACGTGGTCGCCGTCATCGCAGC GAACATTCCGGCGATGTACGAGCTGCACTTCAGCGTGCCGATGGCCGGCGGCGTGCTCTG CACGCTGAACACCCGGCACGACGCGGCCATGGTGTCCGTCCTTCTCAGACATTCGGAGGC CAAGGTTTTCCTCGTCGAATCGCAGTTCCTCGCCGTCGCCCACGACGCCCTGAGGCTGCT CGCCGATGCTAAAGCCAAATTTCCCCTTGTCATCGCGATCTCCGACACCGGCGACAGCAG CAGCAGCGACGGTGGCGGGCTAGAGTACGAGGCGCTTCTGAGGGACGCGCCGCGGGGCTT CGAGATCAGGTGGCCGGCCGACGAGCGCGACCCGATATCGCTCAACTACACGTCGGGGAC GACGTCGAGGCCGAAGGGCGTCATCTACAGCCACCGCGGCGCGTACCTGAACTCGCTGGC CGCGCTGCTCTGCAACGACATGACGTCCATGCCGGTGTACCTCTGGACCGTGCCCATGTT CCACTGCAACGGGTGGTGCATGGCGTGGGCCACGGCGGCGCAGGGCGGGACGAACATCTG CGTCAGGAACGTCGTGCCCAAGGTCATCTTCGAGCAGATCGTGCGCCACGGCGTGACCAA CATGGGCGGCGCGCCCACGGTGCTCAACATGATCGTGAACGCGCCGGCGTCGGAGCGGAG GCCGCTGCCGAGGAGGGTGCTCATCTCGACGGGCGGCGCGCCGCCGCCTCCGCAGGTGCT GGCCAAGATGGAGGAGCTCGGTTTCAACGTCCAGCACGGGTACGGCCTCACCGAGACGTA CGGGCCGGCGACGCGGTGCGTGTGGAGACCCGAGTGGGACGCGCTGCCGCTCGCCGAGCG CGCGCGGATCAAGGCGCTCCAGGGGGTGCAGCACCAGATGTTGCAGGACGTCGACATCAA GGACCCGGTGACCATGGCGAGCGTGCCGTCCGACGGGCGCGCCGTCGGCGAGGTCATGCT CCGCGGCAACACGGTCATGAGCGGGTACTACAAGGACGCGGCGGCCACGGAGGAGGCCAT GCGCGGCGGGTGGCTGCGCACGGGCGACCTCGGCGTGCGCCACCCTGACGGGTATATCCA GCTCAAGGATCGCGCCAAGGACATCATCATATCGGGCGGCGAGAACATCAGCTCGATCGA GGTGGAGTCGGTGCTGTTCGGCCACCACGCGGTGCTCGACGCGGCGGTGGTGGCGAGGCC GGACGACCACTGGGGCGAGACGGCGTGCGCGTTCGTCACGCTGAAGGACGGGGCAAGCGC GACGGCGCACGAGATCATCGCGTTCTGCCGTGCGCGGCTGCCGCGTTACATGGCGCCGAG GACGGTGGTGTTCGGCGACCTGCCCAAGACGTCGACGGGGAAGACGCAGAAGTTCTTGCT CCGGGAGAAGGCCAGGGCCATGGGAAGCCTGCCTATGCAAAGCAAATCCAAGTTGTAGTC TTGTACTATTGTACTAGCTGCGATTGGTTTTGCTGCCAAGATGACAGCGCCCTGCACGAC TACTCCGATATTTTCTGATGATACAGTATTTGGGAAGACCAACACGGATGTTGCATAAAT TCCGTGTTAAAACTGAGTCAAGTGCAGCATCATGTAGGATGCACTTAAAAGTAATCATAA AAAAGAATATACCCTCTTATTCGGGG