Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0132000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:1822255:1825976:1 gene:Os03g0132000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 4 description:Similar to 4-coumarate-CoA ligase-like protein. (Os03t0132000-01)
Sequence	ATGGGACGCTCACCGGAGATGGAGGTGGACGCGCGCAGCGGCTACTGCGCCGCCACCCGC ACGTTCCGGAGCAGGCGCGCCGACGTGCCGCTGCCCGCCGACCCGGAGGTCGACGTGGTC AGCTTCCTCGCCTCGCGCCGCCACTCGGGCGTTGTGGCCCTCGTCGACGCCGCGACTGGG CGCCGGATCACCTTCACCGAGCTCTGGCGCGCCGTGGCCGGGGCGGCATCCGCCCTCGCC GCGCACCCCGTCTCCCTCCGCAAGGGCCACGTCGCGCTCATCCTCTCCCCTAACTCCGTC CACTTCCCCGTCGCCGCCCTCGCCGCCATGTCGCTTGGCGCCGTCCTCACCACCGCCAAC CCGCTCAATACCCCCGCCGAGATCGCCAAGCAGGTCGCCGACGCCCGCCCCGTCCTCGCC TTCACCACCCGCGAGCTCCTCCCCAAGCTCCCGCGTGCCCACGACCTCCGCGTCGTCCTC CTGGAATCCGCCCGCCTCCCCGGCGACAGCTCCGACCCGCGGATCGTCGCCACCATCGAG GAGATCTCCGCCACGACGCCCGACCCGGCGCGCCGCAAGGACCGCGTCACGCAGGACGAT CCGGCCACCCTGCTCTACTCCTCGGGGACGACGGGGCCAAGCAAGGGCGTCGTCGCCACG CACCGGAGCCTCATCTCCATGGTCCAGATCATCATGACGCGATTCCGCCTCGAGGGCTCG GACAAGACAGAGACATTCCTCTGCACGGTGCCCATGTTCCACGTCTACGGCCTCGTCGCC TTCGCCACGGGGCTGCTCGGTTGCGGCGCCACGGTGGTCGTGCTCTCCAAGTACGAGCTC CCGGAGATGCTGCGCTCGATCAACGCCTACGGGGTGACCTACCTTCCGCTCGTGCCGCCG ATCCTGGTCGCCATGGTGGCGCACCCGAAGCCGCTCCCGCTCGGGCAGATGCGCAAGGTG CTATCCGGCGGCGCGCCGCTGGGCAAGGAGCTGATCGAAGGGTTCAGGGAGAAGTATCCG CAGGTGGAGATCCTGCAGGGGTACGGGCTGACAGAGAGCACCGCCATCGGCGCGTCCACG GACTCCGCCGAGGAGAGCCGCCGGTACGGGACGGCCGGGCTTCTGTCTCCCAATACCGAG GCTAAGATTGTCGACCCAGATTCCGGCGAGGCGCTGCCGGTAAACCGCACCGGCGAGCTC TGGATCCGTGGACCGTACGTCATGAAAGGCTACTTCAAGAACGCAGAGGCAACACAGTCA ACGCTGACACCAGATGGATGGCTAAAGACCGGTGATCTCTGCTACATAGATGAGGATGGA TATCTCTTCGTAGTGGACCGCCTCAAGGAGTTGATCAAATACAAAGGTTACCAGGTGCCT CCGGCAGAACTGGAAGCTCTTTTGTTGACGCACCCAGAGGTTACGGATGTTGCCGTTATA CCGTTTCCTGATAGGGAGGTCGGCCAGTTCCCGATGGCCTATATAGTGAGGAAGAAAGGA AGCAACTTGTCAGAGCGCGAGGTGATGGAGTTTGTGGCAAAACAGGTTGCGCCTTACAAG AAGGTTAGAAAGGTGGCGTTTGTGACGGACATTCCCAAGAATGCATCCGGGAAGATACTG AGGAAGGATCTTATTAAGCTTGCCACATCCAAACTATGA

Peptide Sequence

PEP ID	Os03t0132000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:1822255:1825976:1 gene:Os03g0132000 transcript:Os03t0132000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 4 description:Similar to 4-coumarate-CoA ligase-like protein. (Os03t0132000-01)
Sequence	MGRSPEMEVDARSGYCAATRTFRSRRADVPLPADPEVDVVSFLASRRHSGVVALVDAATG RRITFTELWRAVAGAASALAAHPVSLRKGHVALILSPNSVHFPVAALAAMSLGAVLTTAN PLNTPAEIAKQVADARPVLAFTTRELLPKLPRAHDLRVVLLESARLPGDSSDPRIVATIE EISATTPDPARRKDRVTQDDPATLLYSSGTTGPSKGVVATHRSLISMVQIIMTRFRLEGS DKTETFLCTVPMFHVYGLVAFATGLLGCGATVVVLSKYELPEMLRSINAYGVTYLPLVPP ILVAMVAHPKPLPLGQMRKVLSGGAPLGKELIEGFREKYPQVEILQGYGLTESTAIGAST DSAEESRRYGTAGLLSPNTEAKIVDPDSGEALPVNRTGELWIRGPYVMKGYFKNAEATQS TLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEVTDVAVI PFPDREVGQFPMAYIVRKKGSNLSEREVMEFVAKQVAPYKKVRKVAFVTDIPKNASGKIL RKDLIKLATSKL

Transcript Sequence

Transcript ID	Os03t0132000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:1822255:1825976:1 gene:Os03g0132000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 4 description:Similar to 4-coumarate-CoA ligase-like protein. (Os03t0132000-01)
Sequence	AGCCACACATTCCACAGCCGCGACGCGACACCGGAAACAAACGCAGGTAGCAACTGCAAG GGGCAGTTGGCTGGAGCTCGGTGATCTGTGGGTCTGATCGCGATGGGACGCTCACCGGAG ATGGAGGTGGACGCGCGCAGCGGCTACTGCGCCGCCACCCGCACGTTCCGGAGCAGGCGC GCCGACGTGCCGCTGCCCGCCGACCCGGAGGTCGACGTGGTCAGCTTCCTCGCCTCGCGC CGCCACTCGGGCGTTGTGGCCCTCGTCGACGCCGCGACTGGGCGCCGGATCACCTTCACC GAGCTCTGGCGCGCCGTGGCCGGGGCGGCATCCGCCCTCGCCGCGCACCCCGTCTCCCTC CGCAAGGGCCACGTCGCGCTCATCCTCTCCCCTAACTCCGTCCACTTCCCCGTCGCCGCC CTCGCCGCCATGTCGCTTGGCGCCGTCCTCACCACCGCCAACCCGCTCAATACCCCCGCC GAGATCGCCAAGCAGGTCGCCGACGCCCGCCCCGTCCTCGCCTTCACCACCCGCGAGCTC CTCCCCAAGCTCCCGCGTGCCCACGACCTCCGCGTCGTCCTCCTGGAATCCGCCCGCCTC CCCGGCGACAGCTCCGACCCGCGGATCGTCGCCACCATCGAGGAGATCTCCGCCACGACG CCCGACCCGGCGCGCCGCAAGGACCGCGTCACGCAGGACGATCCGGCCACCCTGCTCTAC TCCTCGGGGACGACGGGGCCAAGCAAGGGCGTCGTCGCCACGCACCGGAGCCTCATCTCC ATGGTCCAGATCATCATGACGCGATTCCGCCTCGAGGGCTCGGACAAGACAGAGACATTC CTCTGCACGGTGCCCATGTTCCACGTCTACGGCCTCGTCGCCTTCGCCACGGGGCTGCTC GGTTGCGGCGCCACGGTGGTCGTGCTCTCCAAGTACGAGCTCCCGGAGATGCTGCGCTCG ATCAACGCCTACGGGGTGACCTACCTTCCGCTCGTGCCGCCGATCCTGGTCGCCATGGTG GCGCACCCGAAGCCGCTCCCGCTCGGGCAGATGCGCAAGGTGCTATCCGGCGGCGCGCCG CTGGGCAAGGAGCTGATCGAAGGGTTCAGGGAGAAGTATCCGCAGGTGGAGATCCTGCAG GGGTACGGGCTGACAGAGAGCACCGCCATCGGCGCGTCCACGGACTCCGCCGAGGAGAGC CGCCGGTACGGGACGGCCGGGCTTCTGTCTCCCAATACCGAGGCTAAGATTGTCGACCCA GATTCCGGCGAGGCGCTGCCGGTAAACCGCACCGGCGAGCTCTGGATCCGTGGACCGTAC GTCATGAAAGGCTACTTCAAGAACGCAGAGGCAACACAGTCAACGCTGACACCAGATGGA TGGCTAAAGACCGGTGATCTCTGCTACATAGATGAGGATGGATATCTCTTCGTAGTGGAC CGCCTCAAGGAGTTGATCAAATACAAAGGTTACCAGGTGCCTCCGGCAGAACTGGAAGCT CTTTTGTTGACGCACCCAGAGGTTACGGATGTTGCCGTTATACCGTTTCCTGATAGGGAG GTCGGCCAGTTCCCGATGGCCTATATAGTGAGGAAGAAAGGAAGCAACTTGTCAGAGCGC GAGGTGATGGAGTTTGTGGCAAAACAGGTTGCGCCTTACAAGAAGGTTAGAAAGGTGGCG TTTGTGACGGACATTCCCAAGAATGCATCCGGGAAGATACTGAGGAAGGATCTTATTAAG CTTGCCACATCCAAACTATGAAATGCCAATCAATTATCTACTACTCCACAATATATTAAG CTTGTCAAGAATGCATTCGGCAAGATATTGAATACGTTTTGGAATTGGCATAGACACTTT AGTTGTTGTGTACCCTCTTTCTCAATATGGTGGGTATTTGTAAATGAAGATATCATCAGT CATGTGCATTTCTTCTATACATGATCTGGTAGAGTTACACTGTATCCATTCTTGTATAAT CAAATAAAAAATAATTTCCGAGTTCGAGCCTTCGATGT