Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0131400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:1798724:1804320:-1 gene:Os03g0131400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polynucleotide adenylyltransferase region domain containing protein. (Os03t0131400-01)
Sequence	ATGACGACGCCACGACGGCGCGCTGACCCATCGCCCCCGCCTGCTCGCCGCCTCCTCCAC CGCCTCGGCTCCGCGGCCTCCGGTCTGCAGACGCTGGCGTACAGCTCGAAGAAGGAAGGC GGCGGCGGCGACATGGGCCCACGCAACGGCGGTTCCTCTTCTAATAGAAGACCAGGATTT GTTGATTCTTCTTCATGGAGATATTTTGACTCGAGGGTTGTTGGTATTACTAGAGGGGAT ATACCTCGCCATGCCTGGACTGTCCTACACATGCTAAAACGAAAAGGGTTTGCAGCTTAT CTTGTTGGGGGATGCGTGAGAGATTTGCTACTGAAAAGGGCACCTAAAGATTTTGATGTG ATTACTACCGCAAGCCTCCAGCAGATTAAGAAAATGGTTTTCCAACGATGTATAATTATT GGCAAACGCTTTCCAATATGCCAGGTTAATATGTATGGCACAAAAATTGAGGTTTCTAGC TTTAGCACGAATGCAAATCATGTGAAAGGAAGTAAAAATATAGGATGTTCAGAGGAGTTT AAACGTTATGATGAGGGGGATATTCTTCTCTGGCAGAATTCTATGAAAAGAGACTTTACA ATAAACAGCTTATTCTTTAATCCATTTAACTTTAAGATTTATGATTATGTGAATGGAGTA AGGGATATTAGCAAAAACAAGGTGTCTACAGTGATTCCTGCCCGTGTTTCATTCAAGGAA GACCCTGCCAGGATTTTGCGTGGCTTGAGAATTGCTGCTCGCCTTGGTTTTGAGTTCTCC AGTGAAACTTCTGCTGCAATACGGGAACTTTCTTTGTCCATAACAGATATTGACAAGGCA AGATTAATGATGGAATTGAATTATTTATTGTCTTATGGGGCAGCAGCTTCTTCTCTTAGG TTACTTAGAAAATATGGACTTCTCGATTTTTTGCTGCCTTTCCAGGCAGCATATATGTCG GATCAGATGAAGGATAAATCAAATGACACAGATTTAATGCTCATGAAACTACTGGCTAAT CTTGATAAATTACTCTCTGCTGATCAGCCATGCCCCTCCTGTTTGTGGTTAGCACTGTTG ACATTTCACAGTGCATTGGTAAATTCTCCACATGATGCCCAGGTAATCAGGGCTTTTGCT GCACTAATGTATTTTGGATCATGGGAGGGCGCAGTCAACTTCTTGAATCAAGACATTGGA GCACCAGCCCCGTTTATTCCAGAAACACTAGGGCCTTCTCGGAGCAAACTGGAGAATCTC ATGGAACAAACATCACATTTAGCATCACTAGTCAAGTCGTCAGTTGATACGTTGACATCT ATAGATGCTCTCCAACAATCACTGGCCAAATACTCAAAGGCTTCACAAGTTTCAGGACTG GTGCTTGTATCTAGCAGAGAGAGGGAGAGAGTGTTGAGAATATTTGAGGGCCTTGATACT GACTTAACTTCATATGAAGGGACAAGAGGGATGCAGGAAATTGATTATAAGTTACTGAAG GATGGGCACCCTGGTGAGGTCCGGTTTGTTCTTGGGCAAGTAATCATGGACACTATGAGC GAGGAGTTACCACGTGTATCCACTGAGTATGATCAGCTCAATATGGAGGCTAGTGAAGAT GATCTTGCTGACGGAAGCCGTCCTTCACTGTCCACATTATTTTCCAGTAAATCGTGA

Peptide Sequence

PEP ID	Os03t0131400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:1798724:1804320:-1 gene:Os03g0131400 transcript:Os03t0131400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polynucleotide adenylyltransferase region domain containing protein. (Os03t0131400-01)
Sequence	MTTPRRRADPSPPPARRLLHRLGSAASGLQTLAYSSKKEGGGGDMGPRNGGSSSNRRPGF VDSSSWRYFDSRVVGITRGDIPRHAWTVLHMLKRKGFAAYLVGGCVRDLLLKRAPKDFDV ITTASLQQIKKMVFQRCIIIGKRFPICQVNMYGTKIEVSSFSTNANHVKGSKNIGCSEEF KRYDEGDILLWQNSMKRDFTINSLFFNPFNFKIYDYVNGVRDISKNKVSTVIPARVSFKE DPARILRGLRIAARLGFEFSSETSAAIRELSLSITDIDKARLMMELNYLLSYGAAASSLR LLRKYGLLDFLLPFQAAYMSDQMKDKSNDTDLMLMKLLANLDKLLSADQPCPSCLWLALL TFHSALVNSPHDAQVIRAFAALMYFGSWEGAVNFLNQDIGAPAPFIPETLGPSRSKLENL MEQTSHLASLVKSSVDTLTSIDALQQSLAKYSKASQVSGLVLVSSRERERVLRIFEGLDT DLTSYEGTRGMQEIDYKLLKDGHPGEVRFVLGQVIMDTMSEELPRVSTEYDQLNMEASED DLADGSRPSLSTLFSSKS

Transcript Sequence

Transcript ID	Os03t0131400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:1798724:1804320:-1 gene:Os03g0131400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polynucleotide adenylyltransferase region domain containing protein. (Os03t0131400-01)
Sequence	GCACTCACCTAGCCGGCGGCCGCGGGCGAGTGATGACGACGCCACGACGGCGCGCTGACC CATCGCCCCCGCCTGCTCGCCGCCTCCTCCACCGCCTCGGCTCCGCGGCCTCCGGTCTGC AGACGCTGGCGTACAGCTCGAAGAAGGAAGGCGGCGGCGGCGACATGGGCCCACGCAACG GCGGTTCCTCTTCTAATAGAAGACCAGGATTTGTTGATTCTTCTTCATGGAGATATTTTG ACTCGAGGGTTGTTGGTATTACTAGAGGGGATATACCTCGCCATGCCTGGACTGTCCTAC ACATGCTAAAACGAAAAGGGTTTGCAGCTTATCTTGTTGGGGGATGCGTGAGAGATTTGC TACTGAAAAGGGCACCTAAAGATTTTGATGTGATTACTACCGCAAGCCTCCAGCAGATTA AGAAAATGGTTTTCCAACGATGTATAATTATTGGCAAACGCTTTCCAATATGCCAGGTTA ATATGTATGGCACAAAAATTGAGGTTTCTAGCTTTAGCACGAATGCAAATCATGTGAAAG GAAGTAAAAATATAGGATGTTCAGAGGAGTTTAAACGTTATGATGAGGGGGATATTCTTC TCTGGCAGAATTCTATGAAAAGAGACTTTACAATAAACAGCTTATTCTTTAATCCATTTA ACTTTAAGATTTATGATTATGTGAATGGAGTAAGGGATATTAGCAAAAACAAGGTGTCTA CAGTGATTCCTGCCCGTGTTTCATTCAAGGAAGACCCTGCCAGGATTTTGCGTGGCTTGA GAATTGCTGCTCGCCTTGGTTTTGAGTTCTCCAGTGAAACTTCTGCTGCAATACGGGAAC TTTCTTTGTCCATAACAGATATTGACAAGGCAAGATTAATGATGGAATTGAATTATTTAT TGTCTTATGGGGCAGCAGCTTCTTCTCTTAGGTTACTTAGAAAATATGGACTTCTCGATT TTTTGCTGCCTTTCCAGGCAGCATATATGTCGGATCAGATGAAGGATAAATCAAATGACA CAGATTTAATGCTCATGAAACTACTGGCTAATCTTGATAAATTACTCTCTGCTGATCAGC CATGCCCCTCCTGTTTGTGGTTAGCACTGTTGACATTTCACAGTGCATTGGTAAATTCTC CACATGATGCCCAGGTAATCAGGGCTTTTGCTGCACTAATGTATTTTGGATCATGGGAGG GCGCAGTCAACTTCTTGAATCAAGACATTGGAGCACCAGCCCCGTTTATTCCAGAAACAC TAGGGCCTTCTCGGAGCAAACTGGAGAATCTCATGGAACAAACATCACATTTAGCATCAC TAGTCAAGTCGTCAGTTGATACGTTGACATCTATAGATGCTCTCCAACAATCACTGGCCA AATACTCAAAGGCTTCACAAGTTTCAGGACTGGTGCTTGTATCTAGCAGAGAGAGGGAGA GAGTGTTGAGAATATTTGAGGGCCTTGATACTGACTTAACTTCATATGAAGGGACAAGAG GGATGCAGGAAATTGATTATAAGTTACTGAAGGATGGGCACCCTGGTGAGGTCCGGTTTG TTCTTGGGCAAGTAATCATGGACACTATGAGCGAGGAGTTACCACGTGTATCCACTGAGT ATGATCAGCTCAATATGGAGGCTAGTGAAGATGATCTTGCTGACGGAAGCCGTCCTTCAC TGTCCACATTATTTTCCAGTAAATCGTGATGGCTAAGCCGTAGTCACTCAACAAAAATTA GCCAGGATCTCTCCATTCCATGATTCCATAATCAACGCGCTCAGCGCATCGAAGTGCTTG GGCGTGCAGGATGGTCAGTTGGCCACCATACAATGCAGGCGAACTTTTACCGCAGCTAAA CTCACGTGGATGCTGGAGAATGATGTTATTGCCCAAGTGCCTGCCTTGACGTCTTTTTGT AGTAGAACTGAGTCTAGTGCGTAGATAGTACTACCAGATAATTGTAACCTTATATTATTC ACTTTGGCTTGTTAGTCTCCGCGTACTGTACCAATGTTGAGTCGTACTGCCCCTTGAACT TTTGAGCTTAGGTGAACTGAAAGTTTGAAACTGTCGCCATGGTTACTTGGGTTGAAAATA CTTCATCAGTAATTTGATTACATGTAACATAGCGAACTGCCATGGGATTTGATAACCATG AGATATTTACTGGATTTCTGATTTGC