Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0131100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:1776356:1780897:-1 gene:Os03g0131100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NLP1 description:Octicosapeptide/Phox/Bem1p domain containing protein. (Os03t0131100-01)
Sequence	ATGGAGCAGAAGCCGTCGCCGCCGCCGCCGCCGAGGAGCGACGAGGAGGAGGATGGATTG ATGGGATGCGGGATGGGCGGGACGGGGGATATCGCCGGCGGTGACCTGGATCTCATGGAG GAGTTCTTGCTGGCGACGCCGGGGTTCGATTTGTCGGAGTTCTGGCATCCGGGGGCGGCG AGCCCCTTCTCCCCGCTGTTCGACATCGGCAGCAGCGTCACTACCTTGACTACCCCCGCG CCGGCGGCCGGCGAGGACGACAGGGACGAGGCGGAGATGCCCAGCCGTGGCGGCGGCGGC CTCGAGGTGAGCCCCGCGCACCGCGGCTGGACGTTCCAGACGGCGCCGCAGGAGGTGGCC GTGGAGCCGACGGTGAAGGAGCGGCTGCGCCGCGCGCTGGAGCGCATCGCGTCGCAGTCG CAGTCGCAGGCGCAGCGGGGCGACGGGGAGCTGCTCGTCCAGGTCTGGGTGCCGACGCGG ATCGGCGACCGGCAGGTGCTGACGACTTGCGGGCAGCCGTTCTGGCTGGACCGCCGGAAC CAGCGCCTCGCCAACTACCGGACGGTGTCGATGAAGTACCAGTTCTCCGCCGACGAGAGC GCGCGCGCCGACCTGGGGCTCCCCGGCCGGGTCTTCGTCGGCCGCGTCCCCGAGTGGACG CCGGACGTCCGCTACTTCTCCACCGAGGAGTACCCGCGCGTCCAGCACGCGCAATACTTC GACATCCGCGGCAGCGTCGCGCTGCCGGTCTTCGAGCCGCGGAGCCGAGCCTGCCTCGGC GTCGTCGAGCTCGTCATGACCACGCAGAAGGTCAACTACAGTGCGGAGATCGAGAACATC TGCAATGCTCTCAAGGAAGTTGATCTCAGGAGCTCTGATGTTTCAAGTGATCCTCGTTCC AAGGTTGTTGATGCTTCTTACCGAGCAATTATACCTGAGATCATGGATGTTCTCAGAGCT GTTTGTGATACCCACAATCTGCCACTAGCCCAGACATGGATACCGTGCATCTGCCAGGCC AAGAGGGGAAGCCGCCACTCTGATGAAAGCTACAAACATTGTGTGTCCACTGTTGATGAG GCATGTTATGTCCGTGATTGTTCCGTATTAGGCTTTCACCAGGCTTGCTCCGAGCATCAT CTGTTCAGAGGTGAGGGTGTTGTCGGCAGGGCATTTGGGACGAATGAGCCATGTTTCTCC CCAGACATTACCACCTACAGCAAGACCCAGTACCCTCTCTCGCATCATGCCAAACTTTTT GGCTTGAGGGCAGCAGTTGCCATCCAGCTGCGAAGTGTCAAGACTGGAAGCCTGGACTTT GTCTTGGAGTTTTTCTTGCCAATGAAGTGCATAAATACTGAAGAGCAAAGGGCCATGCTC AATTCTTTATCTAATACCATACAACAAGTATGCTATACATTAAGAGTTGTGAAGCCAAAA GAGCTGGTAAATGATGGACCATTTGAAATTAGTCAACCAACCAGGCCAGAATTTTATGCC AAGTCTGTGCATGAAGACTTGGATGAGCTCTGTAGTGGTATTAATGTTCCTGGAAGGACA ACATCATTGGAAGCATCTGAGGAGGTATCATCATGGATAGCGAGCTTAGTGGATGCTCAG AATAAGGGAGGAAAGGGAGAAATAGATGTTGACTTGCCATTCGGATTCAGCAAACAAGAT GATGAAGGATTTAGTGTTACAGCTGGCTGGCATACTTCTCCAGTTATGGCACCTGACGGT AGCATGTTTTCAGGGTTTAAGCGGCATGAAGATTATGATGTCAAAGAAAATACTTGTTCC AGTGATCCAAGCAATTCAAACTCGGACAAAGCAGTAGAAAAACGGCGCACTAAGACGGAG AAAACAGTTAGCCTGCAAGATCTTCGGAAGCATTTTGCTGGTAGCCTGAAAGAAGCTGCA AAGAATTTAGGAGTGTGCCCGACTACACTGAAGAGAATATGCAGGCAGCATGGAATTAAT CGTTGGCCATCACGAAAGATCAAGAAAGTTGGGCACTCCCTGAAGAAATTGCAAATGGTC ATTGATTCAGTACATGGTCCTGAAGGAACAGTTCAGCTCAGTTCACTCTATGAAAATTTT ACCAAGACCACATGGTCAGAAAGAGAGTTACAAGGAGATGTCCATTTTCCAGCATCTGAG CAAAACTTTCAGCTGGAACCTTCAGTTCCTGATCGTCCATGTGAGGGCAGATTCACTTCA CATACTTCTGGCTCTAATTCCATCTCCCCATCCTGCAGCCAGAGCTCAAATTCTAGCCTT GGTTGTTCCAGTGTTCCAAAGACTCAGCAACAGCATGGTAGTGCTCCTCAGCTTGCAGTC AAAGAGGAAATATCTATGGATGAGAATCAGTGCTCCACACTAATCAAATCTGCTAGCCAT GCAGAGGCAGAGCTGCAAATGTTTGTTGAAGAAAGACCTACCATGCTATTTAGGTCTCAG AGTCAAGTACTTTTAAGTGAACACAAACCGATAGAAAACATGTCAAACGTGCAAAAGGCT AGGTCTGATTCTCTCAAAATAAAAGCCATCTATGGCGAGGAAAGATGTATATTCCGTCTT CAGCCTAGTTGGGGCTTTCAAAGGCTAAAAGAAGAGATCGTAAAGCGGTTCGGCATTTCT CAGGATACTCACGTGGACCTCAAGTATTTGGACGATGAATCTGAGTGGGTTCTTTTAACC TGTGATGCAGACCTGCTGGAGTGTATTGATGTATACAAGTCATCAAGTAATCAAACAGTT AGAATATTGGTTAATCCTAGCATTCAACCGTTGCTCAATGCTTCCTTCGGTCAAACTGGT CTGTCTTGA

Peptide Sequence

PEP ID	Os03t0131100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:1776356:1780897:-1 gene:Os03g0131100 transcript:Os03t0131100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NLP1 description:Octicosapeptide/Phox/Bem1p domain containing protein. (Os03t0131100-01)
Sequence	MEQKPSPPPPPRSDEEEDGLMGCGMGGTGDIAGGDLDLMEEFLLATPGFDLSEFWHPGAA SPFSPLFDIGSSVTTLTTPAPAAGEDDRDEAEMPSRGGGGLEVSPAHRGWTFQTAPQEVA VEPTVKERLRRALERIASQSQSQAQRGDGELLVQVWVPTRIGDRQVLTTCGQPFWLDRRN QRLANYRTVSMKYQFSADESARADLGLPGRVFVGRVPEWTPDVRYFSTEEYPRVQHAQYF DIRGSVALPVFEPRSRACLGVVELVMTTQKVNYSAEIENICNALKEVDLRSSDVSSDPRS KVVDASYRAIIPEIMDVLRAVCDTHNLPLAQTWIPCICQAKRGSRHSDESYKHCVSTVDE ACYVRDCSVLGFHQACSEHHLFRGEGVVGRAFGTNEPCFSPDITTYSKTQYPLSHHAKLF GLRAAVAIQLRSVKTGSLDFVLEFFLPMKCINTEEQRAMLNSLSNTIQQVCYTLRVVKPK ELVNDGPFEISQPTRPEFYAKSVHEDLDELCSGINVPGRTTSLEASEEVSSWIASLVDAQ NKGGKGEIDVDLPFGFSKQDDEGFSVTAGWHTSPVMAPDGSMFSGFKRHEDYDVKENTCS SDPSNSNSDKAVEKRRTKTEKTVSLQDLRKHFAGSLKEAAKNLGVCPTTLKRICRQHGIN RWPSRKIKKVGHSLKKLQMVIDSVHGPEGTVQLSSLYENFTKTTWSERELQGDVHFPASE QNFQLEPSVPDRPCEGRFTSHTSGSNSISPSCSQSSNSSLGCSSVPKTQQQHGSAPQLAV KEEISMDENQCSTLIKSASHAEAELQMFVEERPTMLFRSQSQVLLSEHKPIENMSNVQKA RSDSLKIKAIYGEERCIFRLQPSWGFQRLKEEIVKRFGISQDTHVDLKYLDDESEWVLLT CDADLLECIDVYKSSSNQTVRILVNPSIQPLLNASFGQTGLS

Transcript Sequence

Transcript ID	Os03t0131100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:1776356:1780897:-1 gene:Os03g0131100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NLP1 description:Octicosapeptide/Phox/Bem1p domain containing protein. (Os03t0131100-01)
Sequence	AGGTTCGTGGCTCGTGTTTGTTCGCCTCCGCGCGGCTGCGTTTCGGCGGATTGGGGGTAT GCGAGGGCTGTGAGGTTGGTGGTGGTGCTTGTCCGGTCATGGAGCAGAAGCCGTCGCCGC CGCCGCCGCCGAGGAGCGACGAGGAGGAGGATGGATTGATGGGATGCGGGATGGGCGGGA CGGGGGATATCGCCGGCGGTGACCTGGATCTCATGGAGGAGTTCTTGCTGGCGACGCCGG GGTTCGATTTGTCGGAGTTCTGGCATCCGGGGGCGGCGAGCCCCTTCTCCCCGCTGTTCG ACATCGGCAGCAGCGTCACTACCTTGACTACCCCCGCGCCGGCGGCCGGCGAGGACGACA GGGACGAGGCGGAGATGCCCAGCCGTGGCGGCGGCGGCCTCGAGGTGAGCCCCGCGCACC GCGGCTGGACGTTCCAGACGGCGCCGCAGGAGGTGGCCGTGGAGCCGACGGTGAAGGAGC GGCTGCGCCGCGCGCTGGAGCGCATCGCGTCGCAGTCGCAGTCGCAGGCGCAGCGGGGCG ACGGGGAGCTGCTCGTCCAGGTCTGGGTGCCGACGCGGATCGGCGACCGGCAGGTGCTGA CGACTTGCGGGCAGCCGTTCTGGCTGGACCGCCGGAACCAGCGCCTCGCCAACTACCGGA CGGTGTCGATGAAGTACCAGTTCTCCGCCGACGAGAGCGCGCGCGCCGACCTGGGGCTCC CCGGCCGGGTCTTCGTCGGCCGCGTCCCCGAGTGGACGCCGGACGTCCGCTACTTCTCCA CCGAGGAGTACCCGCGCGTCCAGCACGCGCAATACTTCGACATCCGCGGCAGCGTCGCGC TGCCGGTCTTCGAGCCGCGGAGCCGAGCCTGCCTCGGCGTCGTCGAGCTCGTCATGACCA CGCAGAAGGTCAACTACAGTGCGGAGATCGAGAACATCTGCAATGCTCTCAAGGAAGTTG ATCTCAGGAGCTCTGATGTTTCAAGTGATCCTCGTTCCAAGGTTGTTGATGCTTCTTACC GAGCAATTATACCTGAGATCATGGATGTTCTCAGAGCTGTTTGTGATACCCACAATCTGC CACTAGCCCAGACATGGATACCGTGCATCTGCCAGGCCAAGAGGGGAAGCCGCCACTCTG ATGAAAGCTACAAACATTGTGTGTCCACTGTTGATGAGGCATGTTATGTCCGTGATTGTT CCGTATTAGGCTTTCACCAGGCTTGCTCCGAGCATCATCTGTTCAGAGGTGAGGGTGTTG TCGGCAGGGCATTTGGGACGAATGAGCCATGTTTCTCCCCAGACATTACCACCTACAGCA AGACCCAGTACCCTCTCTCGCATCATGCCAAACTTTTTGGCTTGAGGGCAGCAGTTGCCA TCCAGCTGCGAAGTGTCAAGACTGGAAGCCTGGACTTTGTCTTGGAGTTTTTCTTGCCAA TGAAGTGCATAAATACTGAAGAGCAAAGGGCCATGCTCAATTCTTTATCTAATACCATAC AACAAGTATGCTATACATTAAGAGTTGTGAAGCCAAAAGAGCTGGTAAATGATGGACCAT TTGAAATTAGTCAACCAACCAGGCCAGAATTTTATGCCAAGTCTGTGCATGAAGACTTGG ATGAGCTCTGTAGTGGTATTAATGTTCCTGGAAGGACAACATCATTGGAAGCATCTGAGG AGGTATCATCATGGATAGCGAGCTTAGTGGATGCTCAGAATAAGGGAGGAAAGGGAGAAA TAGATGTTGACTTGCCATTCGGATTCAGCAAACAAGATGATGAAGGATTTAGTGTTACAG CTGGCTGGCATACTTCTCCAGTTATGGCACCTGACGGTAGCATGTTTTCAGGGTTTAAGC GGCATGAAGATTATGATGTCAAAGAAAATACTTGTTCCAGTGATCCAAGCAATTCAAACT CGGACAAAGCAGTAGAAAAACGGCGCACTAAGACGGAGAAAACAGTTAGCCTGCAAGATC TTCGGAAGCATTTTGCTGGTAGCCTGAAAGAAGCTGCAAAGAATTTAGGAGTGTGCCCGA CTACACTGAAGAGAATATGCAGGCAGCATGGAATTAATCGTTGGCCATCACGAAAGATCA AGAAAGTTGGGCACTCCCTGAAGAAATTGCAAATGGTCATTGATTCAGTACATGGTCCTG AAGGAACAGTTCAGCTCAGTTCACTCTATGAAAATTTTACCAAGACCACATGGTCAGAAA GAGAGTTACAAGGAGATGTCCATTTTCCAGCATCTGAGCAAAACTTTCAGCTGGAACCTT CAGTTCCTGATCGTCCATGTGAGGGCAGATTCACTTCACATACTTCTGGCTCTAATTCCA TCTCCCCATCCTGCAGCCAGAGCTCAAATTCTAGCCTTGGTTGTTCCAGTGTTCCAAAGA CTCAGCAACAGCATGGTAGTGCTCCTCAGCTTGCAGTCAAAGAGGAAATATCTATGGATG AGAATCAGTGCTCCACACTAATCAAATCTGCTAGCCATGCAGAGGCAGAGCTGCAAATGT TTGTTGAAGAAAGACCTACCATGCTATTTAGGTCTCAGAGTCAAGTACTTTTAAGTGAAC ACAAACCGATAGAAAACATGTCAAACGTGCAAAAGGCTAGGTCTGATTCTCTCAAAATAA AAGCCATCTATGGCGAGGAAAGATGTATATTCCGTCTTCAGCCTAGTTGGGGCTTTCAAA GGCTAAAAGAAGAGATCGTAAAGCGGTTCGGCATTTCTCAGGATACTCACGTGGACCTCA AGTATTTGGACGATGAATCTGAGTGGGTTCTTTTAACCTGTGATGCAGACCTGCTGGAGT GTATTGATGTATACAAGTCATCAAGTAATCAAACAGTTAGAATATTGGTTAATCCTAGCA TTCAACCGTTGCTCAATGCTTCCTTCGGTCAAACTGGTCTGTCTTGACAGTGGTGTTGCA GCACTGAAAACAATCATCTCATTGCTCCTTCAGGTAAAGAATGCCTGACGCTGCCTTTGG TTGTAAGTCAAGATGGCGTATGCAGGCTTCAGATTTGGATACTTGGGCTGAGGTGCAAAT TAATGGACAGCTGCCTGTTGATGTTGCAGTTGAACCGTGCTGTGTTCTTGAATTGGAAAT GAAGTAATTGTTGATGTTCCCTGTCGGTGCTTGGTATTGATTTGCATGCTGAAGTTCATG CAGTGGAGTCCACGGGAATAGAAGATGGAGCTGTATGCCTTTTGTTCAGTTTCATAACCA TAGGAACTTTGTGTAGGCAGACTAAACTAGTGTACATAATTGTAGGTGAGTAGGTCAGAG GATGAAAATAATTGGCATTTGTCGAAATGAAGCTTTGGGATAGATTTAGCAGTCAGTTAC AGTTCAAAAGTTTGTAGCTCTTTTGGGGTTTCATCTGACTCAATAGTTCTCAAGTGTTCA CTTCAAGGTTTCAGCATTTGAAAGCCTGCCTCAGGTTACCCGTTACAGCGTGTCTGTTCA GCCTTCATGGGAGCATTTTTGCAATTCTGAAATGTCTTCCCACCAGTAAGCGAAAGGGTT CACAAGAAAGCAGTTGCAGTGCTGGCAATGAAACAAGATCATCATCAAAGTCGAGATGAA TTCTGTTGTTTTTAGATCAGTGTTAGCATTATTGTTAATACAATGTTATTTATATGTTGG AGTAGTTTCGATGTTGCTCGTGTAAACCTGCTCTTTTACGGGTGAAGATTTTTTTTTTTG TATATCATGTACAGTACGGTAGAAATGTAAGAATTGTGCT