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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0129000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:1641654:1645028:1 gene:Os03g0129000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphatidylinositol-glycan biosynthesis protein class F description:GPI biosynthesis protein Pig-F domain containing protein. (Os03t0129000-01)
Sequence

ATGGGCGACGAGGCCACGCAGGTCAGCGCCTCAAGCGCAGTAGCGGTCCATGCTCTGTGC
TTCGCTGGGATCGTGGCAGCCCATCAATTGTCTGGCCGCGGCATGCTCGTCTCCAATCCC
GCCTACGCCCTCCGCCTCCTCGTGGTCTTCGAAGCGCCTCTTGTCATCGCAGTGTTCAGT
TTGCTCCGTCGAAATCCCAAGCGCTGCTCGTTTCTTAAGGCAGCTGCGCGAGGATTGCTT
GGCCTCCCCATTGGTGCGTTCCTAAATGCATTTGGAGCAATTGTTCTTGGTGCACCCATT
GGAATCAAGTACTGGGCAGCAACAACTTATTGGTCACTTCTCATGTCCTTGTTCACATTT
GTTCCTGCAGCATGCGTATTTGGAGCATCCAAAGTGAATTGGCAGGCTGTGCTCTCTCAT
TCCATTTATTGCGGATCAACTGATTCAGTGGACTACATGATATCTGCACCTGCTCATGGA
GCTGTAATAGGAGCATGGCTTGGTGCTTGGCCTATGCCTCTCGACTGGGAAAGACCTTGG
CAGGAATGGCCAATCTCTGTTACTTATGGCTCAGTCGCTGGGCATTTGATTGGAATGGCA
ATATCACTGGCCCTAGTAGTTACTCATAAGAGAAGAGGTCGTGCCAAAGCTGACTAG

Peptide Sequence

PEP ID

Os03t0129000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:1641654:1645028:1 gene:Os03g0129000 transcript:Os03t0129000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphatidylinositol-glycan biosynthesis protein class F description:GPI biosynthesis protein Pig-F domain containing protein. (Os03t0129000-01)
Sequence

MGDEATQVSASSAVAVHALCFAGIVAAHQLSGRGMLVSNPAYALRLLVVFEAPLVIAVFS
LLRRNPKRCSFLKAAARGLLGLPIGAFLNAFGAIVLGAPIGIKYWAATTYWSLLMSLFTF
VPAACVFGASKVNWQAVLSHSIYCGSTDSVDYMISAPAHGAVIGAWLGAWPMPLDWERPW
QEWPISVTYGSVAGHLIGMAISLALVVTHKRRGRAKAD

Transcript Sequence

Transcript ID

Os03t0129000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:1641654:1645028:1 gene:Os03g0129000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphatidylinositol-glycan biosynthesis protein class F description:GPI biosynthesis protein Pig-F domain containing protein. (Os03t0129000-01)
Sequence

AGTTTGCCCACCGCCGCCTCCGCCTTCGCCGCCGCCATCGATCCCCATCCATCCCGCGAG
CGAGCAGAGTCGCCGTAGCTCGTCCTGCTGCTTCCTCCGCCGCCGCCGACCCCCATCCAT
CCCGCGAGCGAGCAGGGTCGCCGTCGCTCGTCCTGTTGCTTCCGCCGCATCCATCCTGTA
GGATCATGCCACTGCGAGAGGTCGCTGAACCGCAACCTGGGAATTGACCTCCCGACTTGG
CAGGTGTTGGCTCCACTGCCACCTATTGACTCCCCCACGGTGCCCCTGTCATGGGCGACG
AGGCCACGCAGGTCAGCGCCTCAAGCGCAGTAGCGGTCCATGCTCTGTGCTTCGCTGGGA
TCGTGGCAGCCCATCAATTGTCTGGCCGCGGCATGCTCGTCTCCAATCCCGCCTACGCCC
TCCGCCTCCTCGTGGTCTTCGAAGCGCCTCTTGTCATCGCAGTGTTCAGTTTGCTCCGTC
GAAATCCCAAGCGCTGCTCGTTTCTTAAGGCAGCTGCGCGAGGATTGCTTGGCCTCCCCA
TTGGTGCGTTCCTAAATGCATTTGGAGCAATTGTTCTTGGTGCACCCATTGGAATCAAGT
ACTGGGCAGCAACAACTTATTGGTCACTTCTCATGTCCTTGTTCACATTTGTTCCTGCAG
CATGCGTATTTGGAGCATCCAAAGTGAATTGGCAGGCTGTGCTCTCTCATTCCATTTATT
GCGGATCAACTGATTCAGTGGACTACATGATATCTGCACCTGCTCATGGAGCTGTAATAG
GAGCATGGCTTGGTGCTTGGCCTATGCCTCTCGACTGGGAAAGACCTTGGCAGGAATGGC
CAATCTCTGTTACTTATGGCTCAGTCGCTGGGCATTTGATTGGAATGGCAATATCACTGG
CCCTAGTAGTTACTCATAAGAGAAGAGGTCGTGCCAAAGCTGACTAGCTAGCCTATGGAT
GACAAGTGCCCTTGCTTTTTCCTGGCCATCAGTGATTTTTCCCGATAGTGTACAAGTATT
CTTTTTTTGGGACCAGAGAGCTTTCATATTGAATATAAGGAGTGATGGCTTACGATAGGA
TCATCCAAGTTCTACGTTGTTGACTCGTTCATCTGGAACCTTTTGCAGCTAAATCCAGAT
TTATGTCATTTAGCTTTCATATATTGAATATAAGCAGTGATGGCTTACGATAGGATCGTC
C