Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0127600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:1554059:1559153:-1 gene:Os03g0127600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Forkhead-associated domain containing protein. (Os03t0127600-01)
Sequence	ATGGCGGCGCTGGACCCACCGAGCGAGCTGTTGGTGACGCCGAAGACGGCGAGGAAGGAC GAGGCCGCCTCCTGCAATGCGGCCACCCCGCCCAAGCCCTCGCCGGTGTCCCCCGAGGAG ATGCGCGCGGTGGCGCGCAAGTTCGCCGAGCAACCCGTACAGAACCCCGACGACGGTGTC TGGGCTGTCCTGACGGCCATCTCCAAGAATGCTCGCCTGCGCCCTGAGGGAATGAACATT CTTTTAAGCGCCGATGAGCACTACATAGGCCGTGCCGTTCAGGAATCCAGCTTCAAGATT TCCTCTTTGCAGATCAGTGGGAAACATTGCAAGATATATAGGGACACTGTGTTGGGGGAG CTTAACCGCAATGAACCTGTACCTGTTTTCCTCAAGGACTCGAGCTCAAATGGGACATTC ATCAACTGGACCAGGCTTAAGAAAATTTCACCTCCAACCAAGCTTAATCACGGGGACATT ATATCATTTGTCTCCGCTCCTCATGACAATACTTCCTTTGCATTTGTCTACCGTGAAGTT AATGCTGTCAGTCGTGCAGAGAATGAAGTTACCATCCTTAAAAGGAAGTCAGAGGATATT CATTCTGAAAGAAAGAGACTAAAAGGTCTTGGGATTGGTTCCTCTGATGGTCCTGTTTCA CTAGATGATGTTCGTCGGCTAGAGAAATCTAATGCTGAGCTCAGGGAACAACTTGAGGAA CATGTTGTCACAATTGAGACTTTGAGAACTCAAATTAAAATATCTGAAGCACAGCATGAA AAGGAATTGAAGGAGTTGAAAGAGATTACATCGAGTACTTATGTTGATCAAGCTAAATCT CTTCAGCAAACATTAGAGTACAAGCAGAAACAAATAGATTCACTTAGTACATCAAATACA GAGTTACAGAATTCAATAAAAGATCTCGATGAGAGGCTTAGCGCATATAAGCAATCACGT GCTGAGGCTGATGAGATAATTCAGAGCCAGAAATCAAATATATGTGAGCTTGAGGCACAG CTAAGTGAGGAGAGAGACTTGCGAAGAGAGGAGCGTGATAAGGCTGCAGAAGACTTAAAG TCTGCACTGCATAAAGTGAATGCAGAAGCTCAAGAAGAAATCAAGAGACAAGCTGAGGCT CACCTTAGACAACAACGGGAACAGAAAGAAGTTATTAGCAAGCTTCAGGAATCAGAAAAG GAAATCCGTTTGCTTGTGGAAACATTGAGATCTAAGCTGGAAGATACTCGAGAGAACCTT GTCACATCTGAGAAAAAAGCAAGAGAGCTGGAAGCTCAACTTCAGGATGAACAGCTTGTA TCCGCCAACAATCAGAAGAAATCAGATAAACTGGAAATGGATCTGAGAAAAGTGAAGAAA GAACTTGAACACGAGAAGGCTGCTCGGGAAGAAGCATGGGCAAAGGTCTCAGCTCTTGAG CTTGAAATAGCTGCTACAATTAGAGATCTATCAATCGAGAAACAGAGGTATCAAGGAGCA AGAGAGAGAATTATTTTACGGGAGACTCAGCTGCGTGCTTTCTATTCAACTACAGAGGAA ATATCTTCTCTGTTTGCAAAACAGCAGGAACAGCTTAAAGCAATGCAGAGAACTCTGGAG GATGAAGAGAATTATGAGAACAGTATCATGGGTGATGATCTCAATAAAGTGCCACTGGCA ACTGTAACTGCTGACGATGCCCGCACGAGAGTAAACTACTCAAAAAATACAATGGAAGCT TCTGGTGCTTCAACAGAGAATACCCAGGCAAGTGAACAAAGTTCAAGTGATGATTCCAAG GAGACTGAACAACAGGATGATTTTACCAGAGTTGAAGGGGCAAACACTCAAGAGGTAGAG TGCAATAGTCCAGAAATGGCAACAGAGAGATTCAGGTCTGATTCTCATGGTGATCTGGCT GCTACAGCTCCTGAGCTAGAGCCAACAGATACTGAGCAAGTTCCCGAGACAGAAAGCCAA GCTGGTAATGTTGGCTGTGGTGATCACAATTCAGCTCTTCAAAGATTTAGTGAAATGGGA GGTGATACCATGCAGCTAGATGATGAAGTGCAACCACAAGAGAATGATGAGTCCATCTTG ATTTGCAAAGATAGAGGGCAACCACAAGGAAATGAGGAAGCCTCGTTAACCCTCAAAGAT GGCATTGGTCACTATTCTGAAGAAAAACTTGAGGTTAACTGTTCTGAGAGAAAACACGAG GATACCCAGACCAGAACCATTGGTACAGCTGATTTGTTGGCCTCAGAAGTTGCTGGTAGC TGGGCAGTGGAAACAGGTCCATCTGTCAATGGGGAGAATGAGTCTCCTAGGAGCTTGGGG GAGACTACAGACCATGCCGGGGAGCAGGATGAAAATGTCAGAGGGAGCTCAGCAGCTGAT GCTTTAGTGAACTCTGATGGACAGGCTGCTGGGAGCCAGAGTAATATTGATCATGTCATC AGTAAAATAACCGATCATCATCGTGTTCTTAATGCTATGATCGAAATTGTTGATCCAGAT TTCAGAAAGCAACTCCCAGGAAGTGGTGTTGGAAAAGATGATCTGATGTCTGATGCGGAG ACTGAGGAAGGCAGTGAGGCGAATGATACAGATAGCGACAGTGAGGAGGCCATGGTTGAA GATTCTGTTGGATAG

Peptide Sequence

PEP ID	Os03t0127600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:1554059:1559153:-1 gene:Os03g0127600 transcript:Os03t0127600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Forkhead-associated domain containing protein. (Os03t0127600-01)
Sequence	MAALDPPSELLVTPKTARKDEAASCNAATPPKPSPVSPEEMRAVARKFAEQPVQNPDDGV WAVLTAISKNARLRPEGMNILLSADEHYIGRAVQESSFKISSLQISGKHCKIYRDTVLGE LNRNEPVPVFLKDSSSNGTFINWTRLKKISPPTKLNHGDIISFVSAPHDNTSFAFVYREV NAVSRAENEVTILKRKSEDIHSERKRLKGLGIGSSDGPVSLDDVRRLEKSNAELREQLEE HVVTIETLRTQIKISEAQHEKELKELKEITSSTYVDQAKSLQQTLEYKQKQIDSLSTSNT ELQNSIKDLDERLSAYKQSRAEADEIIQSQKSNICELEAQLSEERDLRREERDKAAEDLK SALHKVNAEAQEEIKRQAEAHLRQQREQKEVISKLQESEKEIRLLVETLRSKLEDTRENL VTSEKKARELEAQLQDEQLVSANNQKKSDKLEMDLRKVKKELEHEKAAREEAWAKVSALE LEIAATIRDLSIEKQRYQGARERIILRETQLRAFYSTTEEISSLFAKQQEQLKAMQRTLE DEENYENSIMGDDLNKVPLATVTADDARTRVNYSKNTMEASGASTENTQASEQSSSDDSK ETEQQDDFTRVEGANTQEVECNSPEMATERFRSDSHGDLAATAPELEPTDTEQVPETESQ AGNVGCGDHNSALQRFSEMGGDTMQLDDEVQPQENDESILICKDRGQPQGNEEASLTLKD GIGHYSEEKLEVNCSERKHEDTQTRTIGTADLLASEVAGSWAVETGPSVNGENESPRSLG ETTDHAGEQDENVRGSSAADALVNSDGQAAGSQSNIDHVISKITDHHRVLNAMIEIVDPD FRKQLPGSGVGKDDLMSDAETEEGSEANDTDSDSEEAMVEDSVG

Transcript Sequence

Transcript ID	Os03t0127600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:1554059:1559153:-1 gene:Os03g0127600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Forkhead-associated domain containing protein. (Os03t0127600-01)
Sequence	ACTCCACTCCCCTTCCCTACCCGCCCCCGTCGCCGTCCTCCTTTTCCCGCGAATCCGCGA TCTTCCGCCGCGCGCGTCACTCGTCGACCCCCCTAAGCCGCCGCCGGGCGATGGCGGCGC TGGACCCACCGAGCGAGCTGTTGGTGACGCCGAAGACGGCGAGGAAGGACGAGGCCGCCT CCTGCAATGCGGCCACCCCGCCCAAGCCCTCGCCGGTGTCCCCCGAGGAGATGCGCGCGG TGGCGCGCAAGTTCGCCGAGCAACCCGTACAGAACCCCGACGACGGTGTCTGGGCTGTCC TGACGGCCATCTCCAAGAATGCTCGCCTGCGCCCTGAGGGAATGAACATTCTTTTAAGCG CCGATGAGCACTACATAGGCCGTGCCGTTCAGGAATCCAGCTTCAAGATTTCCTCTTTGC AGATCAGTGGGAAACATTGCAAGATATATAGGGACACTGTGTTGGGGGAGCTTAACCGCA ATGAACCTGTACCTGTTTTCCTCAAGGACTCGAGCTCAAATGGGACATTCATCAACTGGA CCAGGCTTAAGAAAATTTCACCTCCAACCAAGCTTAATCACGGGGACATTATATCATTTG TCTCCGCTCCTCATGACAATACTTCCTTTGCATTTGTCTACCGTGAAGTTAATGCTGTCA GTCGTGCAGAGAATGAAGTTACCATCCTTAAAAGGAAGTCAGAGGATATTCATTCTGAAA GAAAGAGACTAAAAGGTCTTGGGATTGGTTCCTCTGATGGTCCTGTTTCACTAGATGATG TTCGTCGGCTAGAGAAATCTAATGCTGAGCTCAGGGAACAACTTGAGGAACATGTTGTCA CAATTGAGACTTTGAGAACTCAAATTAAAATATCTGAAGCACAGCATGAAAAGGAATTGA AGGAGTTGAAAGAGATTACATCGAGTACTTATGTTGATCAAGCTAAATCTCTTCAGCAAA CATTAGAGTACAAGCAGAAACAAATAGATTCACTTAGTACATCAAATACAGAGTTACAGA ATTCAATAAAAGATCTCGATGAGAGGCTTAGCGCATATAAGCAATCACGTGCTGAGGCTG ATGAGATAATTCAGAGCCAGAAATCAAATATATGTGAGCTTGAGGCACAGCTAAGTGAGG AGAGAGACTTGCGAAGAGAGGAGCGTGATAAGGCTGCAGAAGACTTAAAGTCTGCACTGC ATAAAGTGAATGCAGAAGCTCAAGAAGAAATCAAGAGACAAGCTGAGGCTCACCTTAGAC AACAACGGGAACAGAAAGAAGTTATTAGCAAGCTTCAGGAATCAGAAAAGGAAATCCGTT TGCTTGTGGAAACATTGAGATCTAAGCTGGAAGATACTCGAGAGAACCTTGTCACATCTG AGAAAAAAGCAAGAGAGCTGGAAGCTCAACTTCAGGATGAACAGCTTGTATCCGCCAACA ATCAGAAGAAATCAGATAAACTGGAAATGGATCTGAGAAAAGTGAAGAAAGAACTTGAAC ACGAGAAGGCTGCTCGGGAAGAAGCATGGGCAAAGGTCTCAGCTCTTGAGCTTGAAATAG CTGCTACAATTAGAGATCTATCAATCGAGAAACAGAGGTATCAAGGAGCAAGAGAGAGAA TTATTTTACGGGAGACTCAGCTGCGTGCTTTCTATTCAACTACAGAGGAAATATCTTCTC TGTTTGCAAAACAGCAGGAACAGCTTAAAGCAATGCAGAGAACTCTGGAGGATGAAGAGA ATTATGAGAACAGTATCATGGGTGATGATCTCAATAAAGTGCCACTGGCAACTGTAACTG CTGACGATGCCCGCACGAGAGTAAACTACTCAAAAAATACAATGGAAGCTTCTGGTGCTT CAACAGAGAATACCCAGGCAAGTGAACAAAGTTCAAGTGATGATTCCAAGGAGACTGAAC AACAGGATGATTTTACCAGAGTTGAAGGGGCAAACACTCAAGAGGTAGAGTGCAATAGTC CAGAAATGGCAACAGAGAGATTCAGGTCTGATTCTCATGGTGATCTGGCTGCTACAGCTC CTGAGCTAGAGCCAACAGATACTGAGCAAGTTCCCGAGACAGAAAGCCAAGCTGGTAATG TTGGCTGTGGTGATCACAATTCAGCTCTTCAAAGATTTAGTGAAATGGGAGGTGATACCA TGCAGCTAGATGATGAAGTGCAACCACAAGAGAATGATGAGTCCATCTTGATTTGCAAAG ATAGAGGGCAACCACAAGGAAATGAGGAAGCCTCGTTAACCCTCAAAGATGGCATTGGTC ACTATTCTGAAGAAAAACTTGAGGTTAACTGTTCTGAGAGAAAACACGAGGATACCCAGA CCAGAACCATTGGTACAGCTGATTTGTTGGCCTCAGAAGTTGCTGGTAGCTGGGCAGTGG AAACAGGTCCATCTGTCAATGGGGAGAATGAGTCTCCTAGGAGCTTGGGGGAGACTACAG ACCATGCCGGGGAGCAGGATGAAAATGTCAGAGGGAGCTCAGCAGCTGATGCTTTAGTGA ACTCTGATGGACAGGCTGCTGGGAGCCAGAGTAATATTGATCATGTCATCAGTAAAATAA CCGATCATCATCGTGTTCTTAATGCTATGATCGAAATTGTTGATCCAGATTTCAGAAAGC AACTCCCAGGAAGTGGTGTTGGAAAAGATGATCTGATGTCTGATGCGGAGACTGAGGAAG GCAGTGAGGCGAATGATACAGATAGCGACAGTGAGGAGGCCATGGTTGAAGATTCTGTTG GATAGGCTATAAGGCAGCTACTTTTCCTCGTAAATATCTTAACCATTTTACCCTGCACTC GGGTATGAGCTTGTACCATTTTTTTCAATGTGCATTTTTTTTTCATTTCATTTCAAATTT CTCTTTATCATTTTCGTATGACCTGGCATAACTAGTTTTTATTGTGAATGGTTGGCAATG GCAATTTTATGTAATGTTCCCCACATTCCTTTTTGTCGATAAATACAAGTGTATCTTAAC GAACCGGGGTACTCAAAATACTCGACATAGATATTAGT